Files
simpeg/SimPEG/Tests/test_NewTreeMesh.py
T
2015-02-11 23:08:22 -08:00

237 lines
9.8 KiB
Python

from SimPEG.Mesh import TensorMesh
from SimPEG.Mesh.NewTreeMesh import TreeMesh
import numpy as np
import unittest
import matplotlib.pyplot as plt
TOL = 1e-10
class TestQuadTreeMesh(unittest.TestCase):
def setUp(self):
M = TreeMesh([np.ones(x) for x in [3,2]])
M.refineFace(0)
self.M = M
M.number()
# M.plotGrid(showIt=True)
def test_numbering(self):
M = TreeMesh([2,2,2])
M.number()
M.refineCell(0)
M.refineCell(3)
assert M.isNumbered is False
def test_MeshSizes(self):
self.assertTrue(self.M.nC==9)
self.assertTrue(self.M.nF==25)
self.assertTrue(self.M.nFx==12)
self.assertTrue(self.M.nFy==13)
self.assertTrue(self.M.nE==25)
self.assertTrue(self.M.nEx==13)
self.assertTrue(self.M.nEy==12)
def test_gridCC(self):
x = np.r_[0.25,0.75,1.5,2.5,0.25,0.75,0.5,1.5,2.5]
y = np.r_[0.25,0.25,0.5,0.5,0.75,0.75,1.5,1.5,1.5]
self.assertTrue(np.linalg.norm((np.c_[x,y]-self.M.gridCC).flatten()) == 0)
def test_gridN(self):
x = np.r_[0,0.5,1,2,3,0,0.5,1,0,0.5,1,2,3,0,1,2,3]
y = np.r_[0,0,0,0,0,.5,.5,.5,1,1,1,1,1,2,2,2,2]
self.assertTrue(np.linalg.norm((np.c_[x,y]-self.M.gridN).flatten()) == 0)
def test_gridFx(self):
x = np.r_[0.0,0.5,1.0,2.0,3.0,0.0,0.5,1.0,0.0,1.0,2.0,3.0]
y = np.r_[0.25,0.25,0.25,0.5,0.5,0.75,0.75,0.75,1.5,1.5,1.5,1.5]
self.assertTrue(np.linalg.norm((np.c_[x,y]-self.M.gridFx).flatten()) == 0)
def test_gridFy(self):
x = np.r_[0.25,0.75,1.5,2.5,0.25,0.75,0.25,0.75,1.5,2.5,0.5,1.5,2.5]
y = np.r_[0,0,0,0,0.5,0.5,1,1,1,1,2,2,2]
self.assertTrue(np.linalg.norm((np.c_[x,y]-self.M.gridFy).flatten()) == 0)
def test_gridEx(self):
x = np.r_[0.25,0.75,1.5,2.5,0.25,0.75,0.25,0.75,1.5,2.5,0.5,1.5,2.5]
y = np.r_[0,0,0,0,0.5,0.5,1,1,1,1,2,2,2]
self.assertTrue(np.linalg.norm((np.c_[x,y]-self.M.gridEx).flatten()) == 0)
def test_gridEy(self):
x = np.r_[0.0,0.5,1.0,2.0,3.0,0.0,0.5,1.0,0.0,1.0,2.0,3.0]
y = np.r_[0.25,0.25,0.25,0.5,0.5,0.75,0.75,0.75,1.5,1.5,1.5,1.5]
self.assertTrue(np.linalg.norm((np.c_[x,y]-self.M.gridEy).flatten()) == 0)
def test_vol(self):
v = np.r_[0.25,0.25,1,1,0.25,0.25,1,1,1]
self.assertTrue(np.linalg.norm((v-self.M.vol)) < TOL)
def test_edge(self):
ex = np.r_[0.5,0.5,1,1,0.5,0.5,0.5,0.5,1,1,1,1,1]
ey = np.r_[0.5,0.5,0.5,1,1,0.5,0.5,0.5,1,1,1,1]
self.assertTrue(np.linalg.norm((np.r_[ex,ey]-self.M.edge)) < TOL)
def test_area(self):
ax = np.r_[0.5,0.5,0.5,1,1,0.5,0.5,0.5,1,1,1,1]
ay = np.r_[0.5,0.5,1,1,0.5,0.5,0.5,0.5,1,1,1,1,1]
self.assertTrue(np.linalg.norm((np.r_[ax,ay]-self.M.area)) < TOL)
class SimpleOctreeOperatorTests(unittest.TestCase):
def setUp(self):
h1 = np.random.rand(5)
h2 = np.random.rand(7)
h3 = np.random.rand(3)
self.tM = TensorMesh([h1,h2,h3])
self.oM = TreeMesh([h1,h2,h3])
self.tM2 = TensorMesh([h1,h2])
self.oM2 = TreeMesh([h1,h2])
# self.oM2.plotGrid(showIt=True)
def test_faceDiv(self):
self.assertAlmostEqual((self.tM.faceDiv - self.oM.faceDiv).toarray().sum(), 0)
self.assertAlmostEqual((self.tM2.faceDiv - self.oM2.faceDiv).toarray().sum(), 0)
def test_nodalGrad(self):
self.assertAlmostEqual((self.tM.nodalGrad - self.oM.nodalGrad).toarray().sum(), 0)
self.assertAlmostEqual((self.tM2.nodalGrad - self.oM2.nodalGrad).toarray().sum(), 0)
def test_edgeCurl(self):
self.assertAlmostEqual((self.tM.edgeCurl - self.oM.edgeCurl).toarray().sum(), 0)
# self.assertAlmostEqual((self.tM2.edgeCurl - self.oM2.edgeCurl).toarray().sum(), 0)
def test_InnerProducts(self):
self.assertAlmostEqual((self.tM.getFaceInnerProduct() - self.oM.getFaceInnerProduct()).toarray().sum(), 0)
self.assertAlmostEqual((self.tM.getEdgeInnerProduct() - self.oM.getEdgeInnerProduct()).toarray().sum(), 0)
# self.assertAlmostEqual((self.tM2.getFaceInnerProduct() - self.oM2.getFaceInnerProduct()).toarray().sum(), 0)
# self.assertAlmostEqual((self.tM2.getEdgeInnerProduct() - self.oM2.getEdgeInnerProduct()).toarray().sum(), 0)
class TestOcTreeObjects(unittest.TestCase):
def setUp(self):
self.M = TreeMesh([2,1,1])
self.M.number()
self.Mr = TreeMesh([2,1,1])
self.Mr.refineCell(0)
self.Mr.number()
def test_counts(self):
self.assertTrue(self.M.nC == 2)
self.assertTrue(self.M.nFx == 3)
self.assertTrue(self.M.nFy == 4)
self.assertTrue(self.M.nFz == 4)
self.assertTrue(self.M.nF == 11)
self.assertTrue(self.M.nEx == 8)
self.assertTrue(self.M.nEy == 6)
self.assertTrue(self.M.nEz == 6)
self.assertTrue(self.M.nE == 20)
self.assertTrue(self.M.nN == 12)
self.assertTrue(self.Mr.nC == 9)
self.assertTrue(self.Mr.nFx == 13)
self.assertTrue(self.Mr.nFy == 14)
self.assertTrue(self.Mr.nFz == 14)
self.assertTrue(self.Mr.nF == 41)
self.assertTrue(self.Mr.nN == 31)
self.assertTrue(self.Mr.nEx == 22)
self.assertTrue(self.Mr.nEy == 20)
self.assertTrue(self.Mr.nEz == 20)
def test_gridCC(self):
x = np.r_[0.25,0.75]
y = np.r_[0.5,0.5]
z = np.r_[0.5,0.5]
self.assertTrue(np.linalg.norm((np.c_[x,y,z]-self.M.gridCC).flatten()) == 0)
x = np.r_[0.125,0.375,0.75,0.125,0.375,0.125,0.375,0.125,0.375]
y = np.r_[0.25,0.25,0.5,0.75,0.75,0.25,0.25,0.75,0.75]
z = np.r_[0.25,0.25,0.5,0.25,0.25,0.75,0.75,0.75,0.75]
self.assertTrue(np.linalg.norm((np.c_[x,y,z]-self.Mr.gridCC).flatten()) == 0)
def test_gridN(self):
x = np.r_[0,0.5,1,0,0.5,1,0,0.5,1,0,0.5,1]
y = np.r_[0,0,0,1,1,1,0,0,0,1,1,1.]
z = np.r_[0,0,0,0,0,0,1,1,1,1,1,1.]
self.assertTrue(np.linalg.norm((np.c_[x,y,z]-self.M.gridN).flatten()) == 0)
x = np.r_[0,0.25,0.5,1,0,0.25,0.5,0,0.25,0.5,1,0,0.25,0.5,0,0.25,0.5,0,0.25,0.5,0,0.25,0.5,1,0,0.25,0.5,0,0.25,0.5,1]
y = np.r_[0,0,0,0,0.5,0.5,0.5,1,1,1,1,0,0,0,0.5,0.5,0.5,1,1,1,0,0,0,0,0.5,0.5,0.5,1,1,1,1]
z = np.r_[0,0,0,0,0,0,0,0,0,0,0,0.5,0.5,0.5,0.5,0.5,0.5,0.5,0.5,0.5,1,1,1,1,1,1,1,1,1,1,1]
self.assertTrue(np.linalg.norm((np.c_[x,y,z]-self.Mr.gridN).flatten()) == 0)
def test_gridFx(self):
x = np.r_[0.0,0.5,1.0]
y = np.r_[0.5,0.5,0.5]
z = np.r_[0.5,0.5,0.5]
self.assertTrue(np.linalg.norm((np.c_[x,y,z]-self.M.gridFx).flatten()) == 0)
x = np.r_[0.0,0.25,0.5,1.0,0.0,0.25,0.5,0.0,0.25,0.5,0.0,0.25,0.5]
y = np.r_[0.25,0.25,0.25,0.5,0.75,0.75,0.75,0.25,0.25,0.25,0.75,0.75,0.75]
z = np.r_[0.25,0.25,0.25,0.5,0.25,0.25,0.25,0.75,0.75,0.75,0.75,0.75,0.75]
self.assertTrue(np.linalg.norm((np.c_[x,y,z]-self.Mr.gridFx).flatten()) == 0)
def test_gridFy(self):
x = np.r_[0.25,0.75,0.25,0.75]
y = np.r_[0,0,1.,1.]
z = np.r_[0.5,0.5,0.5,0.5]
self.assertTrue(np.linalg.norm((np.c_[x,y,z]-self.M.gridFy).flatten()) == 0)
x = np.r_[0.125,0.375,0.75,0.125,0.375,0.125,0.375,0.75,0.125,0.375,0.125,0.375,0.125,0.375]
y = np.r_[0,0,0,0.5,0.5,1,1,1,0,0,0.5,0.5,1,1]
z = np.r_[0.25,0.25,0.5,0.25,0.25,0.25,0.25,0.5,0.75,0.75,0.75,0.75,0.75,0.75]
self.assertTrue(np.linalg.norm((np.c_[x,y,z]-self.Mr.gridFy).flatten()) == 0)
def test_gridFz(self):
x = np.r_[0.25,0.75,0.25,0.75]
y = np.r_[0.5,0.5,0.5,0.5]
z = np.r_[0,0,1.,1.]
self.assertTrue(np.linalg.norm((np.c_[x,y,z]-self.M.gridFz).flatten()) == 0)
x = np.r_[0.125,0.375,0.75,0.125,0.375,0.125,0.375,0.125,0.375,0.125,0.375,0.75,0.125,0.375]
y = np.r_[0.25,0.25,0.5,0.75,0.75,0.25,0.25,0.75,0.75,0.25,0.25,0.5,0.75,0.75]
z = np.r_[0,0,0,0,0,0.5,0.5,0.5,0.5,1,1,1,1,1]
self.assertTrue(np.linalg.norm((np.c_[x,y,z]-self.Mr.gridFz).flatten()) == 0)
def test_gridEx(self):
x = np.r_[0.25,0.75,0.25,0.75,0.25,0.75,0.25,0.75]
y = np.r_[0,0,1.,1.,0,0,1.,1.]
z = np.r_[0,0,0,0,1.,1.,1.,1.]
self.assertTrue(np.linalg.norm((np.c_[x,y,z]-self.M.gridEx).flatten()) == 0)
x = np.r_[0.125,0.375,0.75,0.125,0.375,0.125,0.375,0.75,0.125,0.375,0.125,0.375,0.125,0.375,0.125,0.375,0.75,0.125,0.375,0.125,0.375,0.75]
y = np.r_[0,0,0,0.5,0.5,1,1,1,0,0,0.5,0.5,1,1,0,0,0,0.5,0.5,1,1,1]
z = np.r_[0,0,0,0,0,0,0,0,0.5,0.5,0.5,0.5,0.5,0.5,1,1,1,1,1,1,1,1]
self.assertTrue(np.linalg.norm((np.c_[x,y,z]-self.Mr.gridEx).flatten()) == 0)
def test_gridEy(self):
x = np.r_[0,0.5,1,0,0.5,1]
y = np.r_[0.5,0.5,0.5,0.5,0.5,0.5]
z = np.r_[0,0,0,1.,1.,1.]
self.assertTrue(np.linalg.norm((np.c_[x,y,z]-self.M.gridEy).flatten()) == 0)
x = np.r_[0,0.25,0.5,1,0,0.25,0.5,0,0.25,0.5,0,0.25,0.5,0,0.25,0.5,1,0,0.25,0.5]
y = np.r_[0.25,0.25,0.25,0.5,0.75,0.75,0.75,0.25,0.25,0.25,0.75,0.75,0.75,0.25,0.25,0.25,0.5,0.75,0.75,0.75]
z = np.r_[0,0,0,0,0,0,0,0.5,0.5,0.5,0.5,0.5,0.5,1,1,1,1,1,1,1]
self.assertTrue(np.linalg.norm((np.c_[x,y,z]-self.Mr.gridEy).flatten()) == 0)
def test_gridEz(self):
x = np.r_[0,0.5,1,0,0.5,1]
y = np.r_[0,0,0,1.,1.,1.]
z = np.r_[0.5,0.5,0.5,0.5,0.5,0.5]
self.assertTrue(np.linalg.norm((np.c_[x,y,z]-self.M.gridEz).flatten()) == 0)
x = np.r_[0,0.25,0.5,1,0 ,0.25,0.5,0,0.25,0.5,1,0,0.25,0.5,0 ,0.25,0.5,0 ,0.25,0.5]
y = np.r_[0,0 ,0 ,0,0.5,0.5 ,0.5,1,1 ,1 ,1,0,0 ,0 ,0.5,0.5 ,0.5,1 ,1 ,1 ]
z = np.r_[0.25,0.25,0.25,0.5,0.25,0.25,0.25,0.25,0.25,0.25,0.5,0.75,0.75,0.75,0.75,0.75,0.75,0.75,0.75,0.75]
self.assertTrue(np.linalg.norm((np.c_[x,y,z]-self.Mr.gridEz).flatten()) == 0)
if __name__ == '__main__':
unittest.main()