Merge pull request #647 from not522/gpsampler-default

Make `PreferentialGPSampler` the default for preferential optimization
This commit is contained in:
contramundum53
2023-10-10 13:19:42 +09:00
committed by GitHub
5 changed files with 48 additions and 15 deletions
+23 -15
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@@ -7,9 +7,9 @@ from typing import Iterable
import optuna
from optuna import logging
from optuna._imports import try_import
from optuna.distributions import BaseDistribution
from optuna.samplers import BaseSampler
from optuna.samplers import RandomSampler
from optuna.trial import FrozenTrial
from optuna.trial import TrialState
from optuna_dashboard.preferential._system_attrs import get_n_generate
@@ -20,6 +20,10 @@ from optuna_dashboard.preferential._system_attrs import report_preferences
from optuna_dashboard.preferential._system_attrs import set_n_generate
with try_import() as _imports:
from optuna_dashboard.preferential.samplers.gp import PreferentialGPSampler
_logger = logging.get_logger(__name__)
_SYSTEM_ATTR_PREFERENTIAL_STUDY = "preference:is_preferential"
@@ -344,11 +348,10 @@ def create_study(
sampler:
A sampler object that implements background algorithm for value suggestion.
If :obj:`None` is specified, `RandomSampler`_ is used. Please note that
most Optuna samplers does not work efficiently for preferential optimization.
.. _RandomSampler: https://optuna.readthedocs.io/en/stable/reference/\
samplers/generated/optuna.samplers.RandomSampler.html
If :obj:`None` is specified,
:class:`~optuna_dashboard.preferential.samplers.gp.PreferentialGPSampler` is used.
Please note that most Optuna samplers does not work efficiently for preferential
optimization.
study_name:
Study's name. If this argument is set to None, a unique name is generated
@@ -369,9 +372,13 @@ def create_study(
The interface may change in newer versions without prior notice.
"""
try:
if sampler is None:
_imports.check() # If BoTorch is not installed, raise ImportError.
sampler = PreferentialGPSampler()
study = optuna.create_study(
storage=storage,
sampler=sampler or RandomSampler(),
sampler=sampler,
study_name=study_name,
)
study._storage.set_study_system_attr(
@@ -441,11 +448,10 @@ def load_study(
:func:`~optuna.study.create_study` for further details.
sampler:
A sampler object that implements background algorithm for value suggestion.
If :obj:`None` is specified, `RandomSampler`_ is used. Please note that
most Optuna samplers does not work efficiently for preferential optimization.
.. _RandomSampler: https://optuna.readthedocs.io/en/stable/reference/samplers/\
generated/optuna.samplers.RandomSampler.html
If :obj:`None` is specified,
:class:`~optuna_dashboard.preferential.samplers.gp.PreferentialGPSampler` is used.
Please note that most Optuna samplers does not work efficiently for preferential
optimization.
Returns:
A :class:`~optuna_dashboard.preferential.PreferentialStudy` object.
@@ -454,9 +460,11 @@ def load_study(
Preferential optimization is an experimental feature (introduced in v0.13.0).
The interface may change in newer versions without prior notice.
"""
study = optuna.load_study(
study_name=study_name, storage=storage, sampler=sampler or RandomSampler()
)
if sampler is None:
_imports.check() # If BoTorch is not installed, raise ImportError.
sampler = PreferentialGPSampler()
study = optuna.load_study(study_name=study_name, storage=storage, sampler=sampler)
system_attrs = study._storage.get_study_system_attrs(study._study_id)
if not system_attrs.get(_SYSTEM_ATTR_PREFERENTIAL_STUDY):
raise ValueError("The study is not a PreferentialStudy.")
+5
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@@ -3,6 +3,7 @@ from __future__ import annotations
import copy
import multiprocessing
import pickle
import sys
from typing import Callable
from unittest.mock import patch
import uuid
@@ -22,6 +23,10 @@ from ..storage_supplier import parametrize_storages
from ..storage_supplier import StorageSupplier
if sys.version_info < (3, 8):
pytest.skip("BoTorch dropped Python3.7 support", allow_module_level=True)
@parametrize_storages
def test_study_set_and_get_user_attrs(storage_supplier: Callable[[], StorageSupplier]) -> None:
with storage_supplier() as storage:
+9
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@@ -1,6 +1,7 @@
from __future__ import annotations
import json
import sys
from unittest import TestCase
import optuna
@@ -14,6 +15,7 @@ from optuna_dashboard._preferential_history import remove_history
from optuna_dashboard._preferential_history import report_history
from optuna_dashboard._serializer import serialize_preference_history
from optuna_dashboard.preferential import create_study
import pytest
from .wsgi_client import send_request
@@ -105,6 +107,7 @@ class APITestCase(TestCase):
)
self.assertEqual(status, 400)
@pytest.mark.skipif(sys.version_info < (3, 8), reason="BoTorch dropped Python3.7 support")
def test_get_best_trials_of_preferential_study(self) -> None:
storage = optuna.storages.InMemoryStorage()
study = create_study(n_generate=4, storage=storage)
@@ -128,6 +131,7 @@ class APITestCase(TestCase):
assert len(best_trials) == 1
assert best_trials[0]["number"] == 0
@pytest.mark.skipif(sys.version_info < (3, 8), reason="BoTorch dropped Python3.7 support")
def test_report_preference(self) -> None:
storage = optuna.storages.InMemoryStorage()
study = create_study(n_generate=4, storage=storage)
@@ -161,6 +165,7 @@ class APITestCase(TestCase):
assert better.number == 2
assert worse.number == 1
@pytest.mark.skipif(sys.version_info < (3, 8), reason="BoTorch dropped Python3.7 support")
def test_report_preference_when_typo_mode(self) -> None:
storage = optuna.storages.InMemoryStorage()
study = create_study(storage=storage, n_generate=3)
@@ -184,6 +189,7 @@ class APITestCase(TestCase):
)
self.assertEqual(status, 400)
@pytest.mark.skipif(sys.version_info < (3, 8), reason="BoTorch dropped Python3.7 support")
def test_change_component(self) -> None:
storage = optuna.storages.InMemoryStorage()
study = create_study(storage=storage, n_generate=3)
@@ -214,6 +220,7 @@ class APITestCase(TestCase):
assert study_detail["feedback_component_type"]["output_type"] == "artifact"
assert study_detail["feedback_component_type"]["artifact_key"] == "image"
@pytest.mark.skipif(sys.version_info < (3, 8), reason="BoTorch dropped Python3.7 support")
def test_skip_trial(self) -> None:
storage = optuna.storages.InMemoryStorage()
study = create_study(n_generate=4, storage=storage)
@@ -238,6 +245,7 @@ class APITestCase(TestCase):
assert len(best_trials) == 1
assert best_trials[0].number == 2
@pytest.mark.skipif(sys.version_info < (3, 8), reason="BoTorch dropped Python3.7 support")
def test_remove_history(self) -> None:
storage = optuna.storages.InMemoryStorage()
study = create_study(storage=storage, n_generate=3)
@@ -271,6 +279,7 @@ class APITestCase(TestCase):
assert histories[0]["is_removed"]
assert len(study.get_preferences()) == 0
@pytest.mark.skipif(sys.version_info < (3, 8), reason="BoTorch dropped Python3.7 support")
def test_restore_history(self) -> None:
storage = optuna.storages.InMemoryStorage()
study = create_study(storage=storage, n_generate=3)
@@ -1,6 +1,7 @@
from __future__ import annotations
import json
import sys
from typing import Callable
from typing import TYPE_CHECKING
@@ -13,6 +14,7 @@ from optuna_dashboard._preferential_history import restore_history
from optuna_dashboard._serializer import serialize_preference_history
from optuna_dashboard.preferential import create_study
from optuna_dashboard.preferential._system_attrs import _SYSTEM_ATTR_PREFIX_PREFERENCE
import pytest
from .storage_supplier import parametrize_storages
from .storage_supplier import StorageSupplier
@@ -22,6 +24,10 @@ if TYPE_CHECKING:
from optuna_dashboard._preferential_history import History
if sys.version_info < (3, 8):
pytest.skip("BoTorch dropped Python3.7 support", allow_module_level=True)
@parametrize_storages
def test_report_and_get_choices(storage_supplier: Callable[[], StorageSupplier]) -> None:
with storage_supplier() as storage:
+5
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@@ -1,11 +1,14 @@
from __future__ import annotations
import sys
import optuna
from optuna_dashboard._serializer import serialize_attrs
from optuna_dashboard._serializer import serialize_study_detail
from optuna_dashboard._serializer import serialize_study_summary
from optuna_dashboard._storage import get_study_summaries
from optuna_dashboard.preferential import create_study
import pytest
def test_serialize_bytes() -> None:
@@ -22,6 +25,7 @@ def test_serialize_dict() -> None:
assert len(serialized) <= 1
@pytest.mark.skipif(sys.version_info < (3, 8), reason="BoTorch dropped Python3.7 support")
def test_get_study_detail_is_preferential() -> None:
storage = optuna.storages.InMemoryStorage()
study = create_study(n_generate=4, storage=storage)
@@ -48,6 +52,7 @@ def test_get_study_detail_is_not_preferential() -> None:
assert not study_detail["is_preferential"]
@pytest.mark.skipif(sys.version_info < (3, 8), reason="BoTorch dropped Python3.7 support")
def test_get_study_summary_is_preferential() -> None:
storage = optuna.storages.InMemoryStorage()
create_study(n_generate=4, storage=storage)