fixed ckpt tests (#352)

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests

* fixed ckpt tests
This commit is contained in:
William Falcon
2019-10-10 15:16:19 -04:00
committed by GitHub
parent 96c2a2de50
commit 46322b906b
4 changed files with 123 additions and 99 deletions
+15 -8
View File
@@ -26,6 +26,7 @@ class TestTubeLogger(LightningLoggerBase):
def experiment(self):
if self._experiment is not None:
return self._experiment
self._experiment = Experiment(
save_dir=self.save_dir,
name=self.name,
@@ -39,39 +40,45 @@ class TestTubeLogger(LightningLoggerBase):
@rank_zero_only
def log_hyperparams(self, params):
# TODO: HACK figure out where this is being set to true
self.experiment.debug = self.debug
self.experiment.argparse(params)
@rank_zero_only
def log_metrics(self, metrics, step_num=None):
# TODO: HACK figure out where this is being set to true
self.experiment.debug = self.debug
self.experiment.log(metrics, global_step=step_num)
@rank_zero_only
def save(self):
# TODO: HACK figure out where this is being set to true
self.experiment.debug = self.debug
self.experiment.save()
@rank_zero_only
def finalize(self, status):
# TODO: HACK figure out where this is being set to true
self.experiment.debug = self.debug
self.save()
self.close()
@rank_zero_only
def close(self):
# TODO: HACK figure out where this is being set to true
self.experiment.debug = self.debug
exp = self.experiment
exp.close()
@property
def rank(self):
if self._experiment is None:
return self._rank
else:
return self.experiment.rank
return self._rank
@rank.setter
def rank(self, value):
if self._experiment is None:
self._rank = value
else:
return self.experiment.rank
self._rank = value
if self._experiment is not None:
self.experiment.rank = value
@property
def version(self):
+13 -9
View File
@@ -983,6 +983,19 @@ class Trainer(TrainerIO):
ref_model.use_amp = self.use_amp
ref_model.testing = self.testing
# link up experiment object
if self.logger is not None:
ref_model.logger = self.logger
# save exp to get started
if hasattr(ref_model, "hparams"):
self.logger.log_hyperparams(ref_model.hparams)
self.logger.save()
if self.use_ddp or self.use_ddp2:
dist.barrier()
# set up checkpoint callback
self.__configure_checkpoint_callback()
@@ -1003,15 +1016,6 @@ class Trainer(TrainerIO):
m = "weights_summary can be None, 'full' or 'top'"
raise MisconfigurationException(m)
# link up experiment object
if self.logger is not None:
ref_model.logger = self.logger
# save exp to get started
if hasattr(ref_model, "hparams"):
self.logger.log_hyperparams(ref_model.hparams)
self.logger.save()
# track model now.
# if cluster resets state, the model will update with the saved weights
self.model = model
+20 -20
View File
@@ -15,7 +15,8 @@ from torchvision.datasets import MNIST
import numpy as np
import pdb
# from test_models import assert_ok_test_acc, load_model, \
# clear_save_dir, get_test_tube_logger, get_hparams, init_save_dir
# clear_save_dir, get_test_tube_logger, get_hparams, init_save_dir, \
# init_checkpoint_callback, reset_seed, set_random_master_port
class CoolModel(pl.LightningModule):
@@ -59,55 +60,54 @@ class CoolModel(pl.LightningModule):
@pl.data_loader
def test_dataloader(self):
return DataLoader(MNIST('path/to/save', train=False), batch_size=32)
#
#
# def main():
# """
# Make sure DDP + AMP continue training correctly
# :return:
# """
# """
# Make sure DDP2 works
# :return:
# """
# reset_seed()
# set_random_master_port()
#
# hparams = get_hparams()
# model = LightningTestModel(hparams)
#
# save_dir = init_save_dir()
#
# # logger file to get meta
# # exp file to get meta
# logger = get_test_tube_logger(False)
# logger.log_hyperparams(hparams)
# logger.save()
#
# # logger file to get weights
# checkpoint = ModelCheckpoint(save_dir)
# print(logger.debug)
#
# # exp file to get weights
# checkpoint = init_checkpoint_callback(logger)
#
# trainer_options = dict(
# show_progress_bar=True,
# show_progress_bar=False,
# max_nb_epochs=1,
# train_percent_check=0.4,
# val_percent_check=0.2,
# checkpoint_callback=checkpoint,
# logger=logger,
# gpus=[0, 1],
# distributed_backend='dp'
# distributed_backend='ddp'
# )
#
# # fit model
# trainer = Trainer(**trainer_options)
# result = trainer.fit(model)
#
# exp = logger.experiment
# print(os.listdir(exp.get_data_path(exp.name, exp.version)))
#
# # correct result and ok accuracy
# assert result == 1, 'training failed to complete'
# pretrained_model = load_model(logger.experiment, save_dir, module_class=LightningTestModel)
# pretrained_model = load_model(logger.experiment, save_dir,
# module_class=LightningTestModel)
#
# # run test set
# new_trainer = Trainer(**trainer_options)
# new_trainer.test(pretrained_model)
#
# # test we have good test accuracy
# assert_ok_test_acc(new_trainer)
# clear_save_dir()
#
# if __name__ == '__main__':
# main()
+75 -62
View File
@@ -32,16 +32,68 @@ from pytorch_lightning.logging import TestTubeLogger
from examples import LightningTemplateModel
# generate a list of random seeds for each test
RANDOM_PORTS = list(np.random.randint(12000, 19000, 1000))
ROOT_SEED = 1234
torch.manual_seed(ROOT_SEED)
np.random.seed(ROOT_SEED)
RANDOM_SEEDS = list(np.random.randint(0, 10000, 1000))
RANDOM_PORTS = list(np.random.randint(12000, 19000, 1000))
# ------------------------------------------------------------------------
# TESTS
# ------------------------------------------------------------------------
def test_running_test_pretrained_model_ddp():
"""Verify test() on pretrained model"""
if not can_run_gpu_test():
return
reset_seed()
set_random_master_port()
hparams = get_hparams()
model = LightningTestModel(hparams)
save_dir = init_save_dir()
# exp file to get meta
logger = get_test_tube_logger(False)
# exp file to get weights
checkpoint = init_checkpoint_callback(logger)
trainer_options = dict(
show_progress_bar=False,
max_nb_epochs=1,
train_percent_check=0.4,
val_percent_check=0.2,
checkpoint_callback=checkpoint,
logger=logger,
gpus=[0, 1],
distributed_backend='ddp'
)
# fit model
trainer = Trainer(**trainer_options)
result = trainer.fit(model)
exp = logger.experiment
print(os.listdir(exp.get_data_path(exp.name, exp.version)))
# correct result and ok accuracy
assert result == 1, 'training failed to complete'
pretrained_model = load_model(logger.experiment, save_dir,
module_class=LightningTestModel)
# run test set
new_trainer = Trainer(**trainer_options)
new_trainer.test(pretrained_model)
[run_prediction(dataloader, pretrained_model) for dataloader in model.test_dataloader()]
# test we have good test accuracy
clear_save_dir()
def test_default_logger_callbacks_cpu_model():
"""
Test each of the trainer options
@@ -77,11 +129,11 @@ def test_lbfgs_cpu_model():
trainer_options = dict(
max_nb_epochs=1,
gradient_clip_val=1.0,
overfit_pct=0.20,
overfit_pct=0.30,
print_nan_grads=True,
show_progress_bar=False,
weights_summary='top',
train_percent_check=0.2,
train_percent_check=0.3,
val_percent_check=0.2
)
@@ -144,7 +196,8 @@ def test_dp_resume():
logger = get_test_tube_logger(debug=False)
# exp file to get weights
checkpoint = ModelCheckpoint(save_dir)
# logger file to get weights
checkpoint = init_checkpoint_callback(logger)
# add these to the trainer options
trainer_options['logger'] = logger
@@ -202,55 +255,6 @@ def test_dp_resume():
clear_save_dir()
def test_running_test_pretrained_model_ddp():
"""Verify test() on pretrained model"""
if not can_run_gpu_test():
return
reset_seed()
set_random_master_port()
hparams = get_hparams()
model = LightningTestModel(hparams)
save_dir = init_save_dir()
# exp file to get meta
logger = get_test_tube_logger(False)
# exp file to get weights
checkpoint = ModelCheckpoint(save_dir)
trainer_options = dict(
show_progress_bar=False,
max_nb_epochs=1,
train_percent_check=0.4,
val_percent_check=0.2,
checkpoint_callback=checkpoint,
logger=logger,
gpus=[0, 1],
distributed_backend='ddp'
)
# fit model
trainer = Trainer(**trainer_options)
result = trainer.fit(model)
# correct result and ok accuracy
assert result == 1, 'training failed to complete'
pretrained_model = load_model(logger.experiment, save_dir,
module_class=LightningTestModel)
# run test set
new_trainer = Trainer(**trainer_options)
new_trainer.test(pretrained_model)
[run_prediction(dataloader, pretrained_model) for dataloader in model.test_dataloader()]
# test we have good test accuracy
clear_save_dir()
def test_running_test_after_fitting():
"""Verify test() on fitted model"""
reset_seed()
@@ -264,7 +268,7 @@ def test_running_test_after_fitting():
logger = get_test_tube_logger(False)
# logger file to get weights
checkpoint = ModelCheckpoint(save_dir)
checkpoint = init_checkpoint_callback(logger)
trainer_options = dict(
show_progress_bar=False,
@@ -305,7 +309,7 @@ def test_running_test_without_val():
logger = get_test_tube_logger(False)
# logger file to get weights
checkpoint = ModelCheckpoint(save_dir)
checkpoint = init_checkpoint_callback(logger)
trainer_options = dict(
show_progress_bar=False,
@@ -344,7 +348,7 @@ def test_running_test_pretrained_model():
logger = get_test_tube_logger(False)
# logger file to get weights
checkpoint = ModelCheckpoint(save_dir)
checkpoint = init_checkpoint_callback(logger)
trainer_options = dict(
show_progress_bar=False,
@@ -389,7 +393,7 @@ def test_running_test_pretrained_model_dp():
logger = get_test_tube_logger(False)
# logger file to get weights
checkpoint = ModelCheckpoint(save_dir)
checkpoint = init_checkpoint_callback(logger)
trainer_options = dict(
show_progress_bar=True,
@@ -1115,7 +1119,7 @@ def test_amp_gpu_ddp_slurm_managed():
logger = get_test_tube_logger(False)
# exp file to get weights
checkpoint = ModelCheckpoint(save_dir)
checkpoint = init_checkpoint_callback(logger)
# add these to the trainer options
trainer_options['checkpoint_callback'] = checkpoint
@@ -1459,7 +1463,7 @@ def run_gpu_model_test(trainer_options, model, hparams, on_gpu=True):
logger = get_test_tube_logger(False)
# logger file to get weights
checkpoint = ModelCheckpoint(save_dir)
checkpoint = init_checkpoint_callback(logger)
# add these to the trainer options
trainer_options['checkpoint_callback'] = checkpoint
@@ -1529,7 +1533,7 @@ def get_test_tube_logger(debug=True, version=None):
# set up logger object without actually saving logs
root_dir = os.path.dirname(os.path.realpath(__file__))
save_dir = os.path.join(root_dir, 'save_dir')
logger = TestTubeLogger(save_dir, name='test_tt_dir', debug=debug, version=version)
logger = TestTubeLogger(save_dir, name='lightning_logs', debug=False, version=version)
return logger
@@ -1558,10 +1562,11 @@ def load_model(exp, save_dir, module_class=LightningTemplateModel):
# load trained model
tags_path = exp.get_data_path(exp.name, exp.version)
checkpoint_folder = os.path.join(tags_path, 'checkpoints')
tags_path = os.path.join(tags_path, 'meta_tags.csv')
checkpoints = [x for x in os.listdir(save_dir) if '.ckpt' in x]
weights_dir = os.path.join(save_dir, checkpoints[0])
checkpoints = [x for x in os.listdir(checkpoint_folder) if '.ckpt' in x]
weights_dir = os.path.join(checkpoint_folder, checkpoints[0])
trained_model = module_class.load_from_metrics(weights_path=weights_dir,
tags_csv=tags_path)
@@ -1631,5 +1636,13 @@ def set_random_master_port():
os.environ['MASTER_PORT'] = str(port)
def init_checkpoint_callback(logger):
exp = logger.experiment
exp_path = exp.get_data_path(exp.name, exp.version)
ckpt_dir = os.path.join(exp_path, 'checkpoints')
checkpoint = ModelCheckpoint(ckpt_dir)
return checkpoint
if __name__ == '__main__':
pytest.main([__file__])