Allow user to select individual TPU core to train on (#1729)

* added tpu_id

added tpu_id to mixins

* train on individual tpu

* parallel loader if tpu_id is None

* removed progress_bar_refresh_rate

* chlog

* replaced num_tpu_cores with tpu_cores

* set tpu_id to None if int

* changed num_tpu_cores to tpu_cores in docs

* updated docs

* updated __init__.py
removed self.tpu_id for ParallelLoader

* Update pytorch_lightning/trainer/__init__.py

* check if tpu_cores is a list

Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>

* xla device conditional

* num_tpu_cores deprecation

* removed duplicate warning

* fixed pep8 error

* Revert "removed duplicate warning"

This reverts commit 8adb0a9b

* deprecated api update

* fixed recursion error

* fixed tests

* fixed flake errors

* removed current_tpu_index

* Update CHANGELOG.md

* Update trainer.py

Co-authored-by: Jirka <jirka.borovec@seznam.cz>
Co-authored-by: Jirka Borovec <Borda@users.noreply.github.com>
Co-authored-by: William Falcon <waf2107@columbia.edu>
This commit is contained in:
Lezwon Castelino
2020-05-17 16:30:54 -04:00
committed by GitHub
co-authored by Jirka Borovec Jirka William Falcon
parent 1a797bdad5
commit 7c7e50ca47
14 changed files with 104 additions and 126 deletions
+4
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@@ -8,8 +8,12 @@ The format is based on [Keep a Changelog](http://keepachangelog.com/en/1.0.0/).
### Added
- Added type hints in `Trainer.fit()` and `Trainer.test()` to reflect that also a list of dataloaders can be passed in ([#1723](https://github.com/PyTorchLightning/pytorch-lightning/pull/1723)).
### Changed
- Allow user to select individual TPU core to train on ([#1729](https://github.com/PyTorchLightning/pytorch-lightning/pull/1729))
### Deprecated
### Removed
+5 -1
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@@ -287,7 +287,11 @@ trainer = Trainer(max_epochs=1, gpus=8, num_nodes=32)
Or TPUs
```python
trainer = Trainer(num_tpu_cores=8)
# Distributes TPU core training
trainer = Trainer(tpu_cores=8)
# Single TPU core training
trainer = Trainer(tpu_cores=[1])
```
When you're done training, run the test accuracy
+2 -2
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@@ -58,7 +58,7 @@ TPU 16-bit
.. testcode::
# DEFAULT
trainer = Trainer(num_tpu_cores=8, precision=32)
trainer = Trainer(tpu_cores=8, precision=32)
# turn on 16-bit
trainer = Trainer(num_tpu_cores=8, precision=16)
trainer = Trainer(tpu_cores=8, precision=16)
+7 -49
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@@ -185,7 +185,7 @@ EXACTLY the same as you would a PyTorch Module.
Out:
.. code-block:: none
.. code-block:: python
torch.Size([1, 10])
@@ -519,50 +519,8 @@ First, change the runtime to TPU (and reinstall lightning).
Next, install the required xla library (adds support for PyTorch on TPUs)
.. code-block:: python
import collections
from datetime import datetime, timedelta
import os
import requests
import threading
_VersionConfig = collections.namedtuple('_VersionConfig', 'wheels,server')
VERSION = "torch_xla==nightly" #@param ["xrt==1.15.0", "torch_xla==nightly"]
CONFIG = {
'xrt==1.15.0': _VersionConfig('1.15', '1.15.0'),
'torch_xla==nightly': _VersionConfig('nightly', 'XRT-dev{}'.format(
(datetime.today() - timedelta(1)).strftime('%Y%m%d'))),
}[VERSION]
DIST_BUCKET = 'gs://tpu-pytorch/wheels'
TORCH_WHEEL = 'torch-{}-cp36-cp36m-linux_x86_64.whl'.format(CONFIG.wheels)
TORCH_XLA_WHEEL = 'torch_xla-{}-cp36-cp36m-linux_x86_64.whl'.format(CONFIG.wheels)
TORCHVISION_WHEEL = 'torchvision-{}-cp36-cp36m-linux_x86_64.whl'.format(CONFIG.wheels)
# Update TPU XRT version
def update_server_xrt():
print('Updating server-side XRT to {} ...'.format(CONFIG.server))
url = 'http://{TPU_ADDRESS}:8475/requestversion/{XRT_VERSION}'.format(
TPU_ADDRESS=os.environ['COLAB_TPU_ADDR'].split(':')[0],
XRT_VERSION=CONFIG.server,
)
print('Done updating server-side XRT: {}'.format(requests.post(url)))
update = threading.Thread(target=update_server_xrt)
update.start()
.. code-block::
# Install Colab TPU compat PyTorch/TPU wheels and dependencies
!pip uninstall -y torch torchvision
!gsutil cp "$DIST_BUCKET/$TORCH_WHEEL" .
!gsutil cp "$DIST_BUCKET/$TORCH_XLA_WHEEL" .
!gsutil cp "$DIST_BUCKET/$TORCHVISION_WHEEL" .
!pip install "$TORCH_WHEEL"
!pip install "$TORCH_XLA_WHEEL"
!pip install "$TORCHVISION_WHEEL"
!sudo apt-get install libomp5
update.join()
!curl https://raw.githubusercontent.com/pytorch/xla/master/contrib/scripts/env-setup.py -o pytorch-xla-env-setup.py
!python pytorch-xla-env-setup.py --version nightly --apt-packages libomp5 libopenblas-dev
In distributed training (multiple GPUs and multiple TPU cores) each GPU or TPU core will run a copy
of this program. This means that without taking any care you will download the dataset N times which
@@ -609,7 +567,7 @@ Now we can train the LightningModule on a TPU without doing anything else!
.. code-block:: python
model = LitMNIST()
trainer = Trainer(num_tpu_cores=8)
trainer = Trainer(tpu_cores=8)
trainer.fit(model)
You'll now see the TPU cores booting up.
@@ -696,7 +654,7 @@ while checking the validation set.
from pytorch_lightning import Trainer
model = LitMNIST()
trainer = Trainer(num_tpu_cores=8)
trainer = Trainer(tpu_cores=8)
trainer.fit(model)
You may have noticed the words `Validation sanity check` logged. This is because Lightning runs 5 batches
@@ -747,7 +705,7 @@ Once you train your model simply call `.test()`.
from pytorch_lightning import Trainer
model = LitMNIST()
trainer = Trainer(num_tpu_cores=8)
trainer = Trainer(tpu_cores=8)
trainer.fit(model)
# run test set
@@ -769,7 +727,7 @@ You can also run the test from a saved lightning model
.. code-block:: python
model = LitMNIST.load_from_checkpoint(PATH)
trainer = Trainer(num_tpu_cores=8)
trainer = Trainer(tpu_cores=8)
trainer.test(model)
.. note:: Lightning disables gradients, puts model in eval mode and does everything needed for testing.
+1 -1
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@@ -130,7 +130,7 @@ Lightning allows multiple ways of training
- DistributedDataParallel (`distributed_backend='ddp'`) (multiple-gpus across many machines).
- DistributedDataParallel2 (`distributed_backend='ddp2'`) (dp in a machine, ddp across machines).
- Horovod (`distributed_backend='horovod'`) (multi-machine, multi-gpu, configured at runtime)
- TPUs (`num_tpu_cores=8|x`) (tpu or TPU pod)
- TPUs (`tpu_cores=8|x`) (tpu or TPU pod)
.. note:: If you request multiple GPUs without setting a mode, ddp will be automatically used.
+2 -2
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@@ -189,7 +189,7 @@ However, this time you need to specifically call test (this is done so you don't
# OPTION 2:
# test after loading weights
model = LitModel.load_from_checkpoint(PATH)
trainer = Trainer(num_tpu_cores=1)
trainer = Trainer(tpu_cores=1)
trainer.test()
Again, under the hood, lightning does the following in (pseudocode):
@@ -236,7 +236,7 @@ Without changing a SINGLE line of your code, you can now do the following with t
# train on TPUs using 16 bit precision with early stopping
# using only half the training data and checking validation every quarter of a training epoch
trainer = Trainer(
nb_tpu_cores=8,
tpu_cores=8,
precision=16,
early_stop_checkpoint=True,
train_percent_check=0.5,
+17 -46
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@@ -1,8 +1,8 @@
TPU support
===========
Lightning supports running on TPUs. At this moment, TPUs are only available
on Google Cloud (GCP). For more information on TPUs
Lightning supports running on TPUs. At this moment, TPUs are available
on Google Cloud (GCP), Google Colab and Kaggle Environments. For more information on TPUs
`watch this video <https://www.youtube.com/watch?v=kPMpmcl_Pyw>`_.
---------------
@@ -31,6 +31,7 @@ To access TPUs there are two main ways.
1. Using google colab.
2. Using Google Cloud (GCP).
3. Using Kaggle.
---------------
@@ -51,50 +52,10 @@ To get a TPU on colab, follow these steps:
4. Next, insert this code into the first cell and execute.
This will install the xla library that interfaces between PyTorch and the TPU.
.. code-block:: python
import collections
from datetime import datetime, timedelta
import os
import requests
import threading
_VersionConfig = collections.namedtuple('_VersionConfig', 'wheels,server')
VERSION = "xrt==1.15.0" #@param ["xrt==1.15.0", "torch_xla==nightly"]
CONFIG = {
'xrt==1.15.0': _VersionConfig('1.15', '1.15.0'),
'torch_xla==nightly': _VersionConfig('nightly', 'XRT-dev{}'.format(
(datetime.today() - timedelta(1)).strftime('%Y%m%d'))),
}[VERSION]
DIST_BUCKET = 'gs://tpu-pytorch/wheels'
TORCH_WHEEL = 'torch-{}-cp36-cp36m-linux_x86_64.whl'.format(CONFIG.wheels)
TORCH_XLA_WHEEL = 'torch_xla-{}-cp36-cp36m-linux_x86_64.whl'.format(CONFIG.wheels)
TORCHVISION_WHEEL = 'torchvision-{}-cp36-cp36m-linux_x86_64.whl'.format(CONFIG.wheels)
# Update TPU XRT version
def update_server_xrt():
print('Updating server-side XRT to {} ...'.format(CONFIG.server))
url = 'http://{TPU_ADDRESS}:8475/requestversion/{XRT_VERSION}'.format(
TPU_ADDRESS=os.environ['COLAB_TPU_ADDR'].split(':')[0],
XRT_VERSION=CONFIG.server,
)
print('Done updating server-side XRT: {}'.format(requests.post(url)))
update = threading.Thread(target=update_server_xrt)
update.start()
.. code-block::
# Install Colab TPU compat PyTorch/TPU wheels and dependencies
!pip uninstall -y torch torchvision
!gsutil cp "$DIST_BUCKET/$TORCH_WHEEL" .
!gsutil cp "$DIST_BUCKET/$TORCH_XLA_WHEEL" .
!gsutil cp "$DIST_BUCKET/$TORCHVISION_WHEEL" .
!pip install "$TORCH_WHEEL"
!pip install "$TORCH_XLA_WHEEL"
!pip install "$TORCHVISION_WHEEL"
!sudo apt-get install libomp5
update.join()
!curl https://raw.githubusercontent.com/pytorch/xla/master/contrib/scripts/env-setup.py -o pytorch-xla-env-setup.py
!python pytorch-xla-env-setup.py --version nightly --apt-packages libomp5 libopenblas-dev
5. Once the above is done, install PyTorch Lightning (v 0.7.0+).
@@ -156,13 +117,23 @@ To use a full TPU pod skip to the TPU pod section.
import pytorch_lightning as pl
my_model = MyLightningModule()
trainer = pl.Trainer(num_tpu_cores=8)
trainer = pl.Trainer(tpu_cores=8)
trainer.fit(my_model)
That's it! Your model will train on all 8 TPU cores.
---------------
Single TPU core training
----------------------------
Lightning supports training on a single TPU core. Just pass the TPU core ID [1-8] in a list.
.. code-block:: python
trainer = pl.Trainer(tpu_cores=[1])
---------------
Distributed Backend with TPU
----------------------------
The ```distributed_backend``` option used for GPUs does not apply to TPUs.
@@ -195,7 +166,7 @@ set the 16-bit flag.
import pytorch_lightning as pl
my_model = MyLightningModule()
trainer = pl.Trainer(num_tpu_cores=8, precision=16)
trainer = pl.Trainer(tpu_cores=8, precision=16)
trainer.fit(my_model)
Under the hood the xla library will use the `bfloat16 type <https://en.wikipedia.org/wiki/Bfloat16_floating-point_format>`_.
+23 -8
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@@ -598,7 +598,22 @@ nb_sanity_val_steps:
num_tpu_cores
^^^^^^^^^^^^^
How many TPU cores to train on (1 or 8).
.. warning:: .. deprecated:: 0.7.6
Use `tpu_cores` instead. Will remove 0.9.0.
Example::
python -m torch_xla.distributed.xla_dist
--tpu=$TPU_POD_NAME
--conda-env=torch-xla-nightly
--env=XLA_USE_BF16=1
-- python your_trainer_file.py
tpu_cores
^^^^^^^^^
- How many TPU cores to train on (1 or 8).
- Which TPU core to train on [1-8]
A single TPU v2 or v3 has 8 cores. A TPU pod has
up to 2048 cores. A slice of a POD means you get as many cores
@@ -615,21 +630,21 @@ Example::
# your_trainer_file.py
# default used by the Trainer (ie: train on CPU)
trainer = Trainer(num_tpu_cores=None)
trainer = Trainer(tpu_cores=None)
# int: train on a single core
trainer = Trainer(num_tpu_cores=1)
trainer = Trainer(tpu_cores=1)
# list: train on a single selected core
trainer = Trainer(tpu_cores=[2])
# int: train on all cores few cores
trainer = Trainer(num_tpu_cores=8)
trainer = Trainer(tpu_cores=8)
# for 8+ cores must submit via xla script with
# a max of 8 cores specified. The XLA script
# will duplicate script onto each TPU in the POD
trainer = Trainer(num_tpu_cores=8)
# -1: train on all available TPUs
trainer = Trainer(num_tpu_cores=-1)
trainer = Trainer(tpu_cores=8)
To train on more than 8 cores (ie: a POD),
submit this script using the xla_dist script.
@@ -135,3 +135,9 @@ class TrainerDeprecatedAPITillVer0_9(ABC):
rank_zero_warn("`training_tqdm_dict` was renamed to `progress_bar_dict` in v0.7.3"
" and this method will be removed in v0.9.0", DeprecationWarning)
return self.progress_bar_dict
@property
def num_tpu_cores(self):
"""Back compatibility, will be removed in v0.9.0"""
rank_zero_warn("Argument `num_tpu_cores` is now set by `tpu_cores` since v0.7.6"
" and this argument will be removed in v0.9.0", DeprecationWarning)
+5 -5
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@@ -389,7 +389,6 @@ class TrainerDPMixin(ABC):
root_gpu: ...
amp_level: str
precision: ...
current_tpu_idx: ...
proc_rank: int
tpu_local_core_rank: int
tpu_global_core_rank: int
@@ -398,6 +397,7 @@ class TrainerDPMixin(ABC):
data_parallel_device_ids: ...
logger: Union[LightningLoggerBase, bool]
progress_bar_callback: ...
tpu_id: int
@property
@abstractmethod
@@ -442,7 +442,8 @@ class TrainerDPMixin(ABC):
if device == 'tpu' and XLA_AVAILABLE:
# base case: object can be directly moved using `to`
if callable(getattr(batch, 'to', None)):
return batch.to(xm.xla_device())
xla_device = xm.xla_device(self.tpu_id) if self.tpu_id is not None else xm.xla_device()
return batch.to(xla_device)
if device == 'gpu':
# base case: object can be directly moved using `cuda` or `to`
@@ -501,7 +502,8 @@ class TrainerDPMixin(ABC):
def tpu_train(self, tpu_core_idx, model):
# put model on tpu
model.to(xm.xla_device())
self._device = xm.xla_device(self.tpu_id) if self.tpu_id is not None else xm.xla_device()
model.to(self._device)
# get the appropriate tpu ranks
self.tpu_local_core_rank = xm.get_local_ordinal()
@@ -511,8 +513,6 @@ class TrainerDPMixin(ABC):
if self.tpu_global_core_rank != 0 and self.progress_bar_callback is not None:
self.progress_bar_callback.disable()
# track current tpu
self.current_tpu_idx = tpu_core_idx
self.proc_rank = self.tpu_local_core_rank
rank_zero_only.rank = self.proc_rank
+2 -1
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@@ -174,6 +174,7 @@ class TrainerEvaluationLoopMixin(ABC):
val_dataloaders: DataLoader
use_tpu: bool
reload_dataloaders_every_epoch: ...
tpu_id: int
# Callback system
on_validation_batch_start: Callable
@@ -248,7 +249,7 @@ class TrainerEvaluationLoopMixin(ABC):
dl_outputs = []
# on TPU we have to wrap it under the ParallelLoader
if self.use_tpu:
if self.use_tpu and self.tpu_id is None:
device = xm.xla_device()
dataloader = xla_pl.ParallelLoader(dataloader, [device])
dataloader = dataloader.per_device_loader(device)
+25 -10
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@@ -35,7 +35,6 @@ from pytorch_lightning.trainer.lr_finder import TrainerLRFinderMixin
from pytorch_lightning.utilities.exceptions import MisconfigurationException
from pytorch_lightning.utilities import rank_zero_warn, parsing
try:
from apex import amp
except ImportError:
@@ -82,7 +81,7 @@ class Trainer(
'gradient_clip', 'nb_gpu_nodes', 'max_nb_epochs', 'min_nb_epochs',
'add_row_log_interval', 'nb_sanity_val_steps', 'tng_tqdm_dic',
)
DEPRECATED_IN_0_9 = ('use_amp', 'show_progress_bar', 'training_tqdm_dict')
DEPRECATED_IN_0_9 = ('use_amp', 'show_progress_bar', 'training_tqdm_dict', 'num_tpu_cores')
def __init__(
self,
@@ -97,7 +96,7 @@ class Trainer(
num_processes: int = 1,
gpus: Optional[Union[List[int], str, int]] = None,
auto_select_gpus: bool = False,
num_tpu_cores: Optional[int] = None,
tpu_cores: Optional[Union[List[int], int]] = None,
log_gpu_memory: Optional[str] = None,
progress_bar_refresh_rate: int = 1,
overfit_pct: float = 0.0,
@@ -133,6 +132,7 @@ class Trainer(
progress_bar_callback: Optional[Union[ProgressBarBase, bool]] = True,
terminate_on_nan: bool = False,
auto_scale_batch_size: Union[str, bool] = False,
num_tpu_cores: Optional[int] = None, # backward compatible, todo: remove in v0.9.0
amp_level: str = 'O1', # backward compatible, todo: remove in v0.8.0
default_save_path=None, # backward compatible, todo: remove in v0.8.0
gradient_clip=None, # backward compatible, todo: remove in v0.8.0
@@ -188,7 +188,10 @@ class Trainer(
GPUs are configured to be in "exclusive mode", such
that only one process at a time can access them.
num_tpu_cores: How many TPU cores to train on (1 or 8).
tpu_cores: How many TPU cores to train on (1 or 8) / Single TPU to train on [1]
num_tpu_cores: How many TPU cores to train on (1 or 8)
.. warning:: .. deprecated:: 0.7.6. Will remove 0.9.0.
log_gpu_memory: None, 'min_max', 'all'. Might slow performance
@@ -342,9 +345,19 @@ class Trainer(
self.on_gpu = True if (gpus and torch.cuda.is_available()) else False
# tpu config
self.on_tpu = num_tpu_cores is not None
self.num_tpu_cores = num_tpu_cores
assert num_tpu_cores in [1, 8, None], 'num_tpu_cores can only be 1 or 8'
if num_tpu_cores is not None:
rank_zero_warn("Argument `num_tpu_cores` is now set by `tpu_cores` since v0.7.6"
" and this argument will be removed in v0.9.0", DeprecationWarning)
if tpu_cores is None:
tpu_cores = num_tpu_cores
self.on_tpu = tpu_cores is not None
self.tpu_cores = tpu_cores
assert self.tpu_cores in (1, 8, None) or (
isinstance(self.tpu_cores, (list, tuple, set)) and len(self.tpu_cores) == 1
), '`tpu_cores` can only be 1, 8 or [<1-8>]'
self.tpu_id = tpu_cores[0] if isinstance(tpu_cores, list) else None
if num_processes != 1 and distributed_backend != "ddp_cpu":
rank_zero_warn("num_processes is only used for distributed_backend=\"ddp_cpu\". Ignoring it.")
@@ -477,7 +490,6 @@ class Trainer(
# override dist backend when using tpus
if self.on_tpu:
self.init_tpu()
self.current_tpu_idx = None
# init flags for SLURM+ddp to work
self.proc_rank = 0
@@ -858,7 +870,7 @@ class Trainer(
self.single_gpu_train(model)
elif self.use_tpu: # pragma: no-cover
log.info(f'training on {self.num_tpu_cores} TPU cores')
log.info(f'training on {self.tpu_cores} TPU cores')
# COLAB_GPU is an env var available by default in Colab environments.
start_method = 'fork' if self.on_colab_kaggle else 'spawn'
@@ -867,7 +879,10 @@ class Trainer(
self.model = model
# train
xmp.spawn(self.tpu_train, args=(model,), nprocs=self.num_tpu_cores, start_method=start_method)
if self.tpu_id is not None:
self.tpu_train(self.tpu_id, model)
else:
xmp.spawn(self.tpu_train, args=(model,), nprocs=self.tpu_cores, start_method=start_method)
# load weights if not interrupted
self.load_spawn_weights(model)
+2 -1
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@@ -231,6 +231,7 @@ class TrainerTrainLoopMixin(ABC):
total_batch_idx: int
checkpoint_callback: ...
terminate_on_nan: bool
tpu_id: int
# Callback system
callbacks: List[Callback]
@@ -393,7 +394,7 @@ class TrainerTrainLoopMixin(ABC):
train_dataloader = self.train_dataloader
# on TPU we have to wrap it under the ParallelLoader
if self.use_tpu:
if self.use_tpu and self.tpu_id is None:
device = xm.xla_device()
train_dataloader = xla_pl.ParallelLoader(train_dataloader, [device])
train_dataloader = train_dataloader.per_device_loader(device)
+3
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@@ -96,6 +96,9 @@ def test_tbd_remove_in_v0_9_0_trainer():
trainer = Trainer(progress_bar_refresh_rate=50, show_progress_bar=False)
assert getattr(trainer, 'show_progress_bar')
with pytest.deprecated_call(match='v0.9.0'):
_ = Trainer(num_tpu_cores=8)
def test_tbd_remove_in_v0_9_0_module_imports():
_soft_unimport_module("pytorch_lightning.core.decorators")