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This commit is contained in:
William Falcon
2020-06-01 11:00:32 -04:00
committed by GitHub
parent fd38f52e55
commit 82a20296e3
19 changed files with 283 additions and 174 deletions
+2 -2
View File
@@ -12,8 +12,8 @@ rm -rf ./tests/cometruns*
rm -rf ./tests/wandb*
rm -rf ./tests/tests/*
rm -rf ./lightning_logs
python -m coverage run --source pytorch_lightning -m py.test pytorch_lightning tests pl_examples -v --doctest-modules --flake8
python -m coverage run --source pytorch_lightning -m py.test pytorch_lightning tests pl_examples -v --doctest-modules --flake8 --durations=0
python -m coverage report -m
# specific file
# python -m coverage run --source pytorch_lightning -m py.test -k test_trainer.py --flake8
# python -m coverage run --source pytorch_lightning -m py.test -k test_trainer.py --flake8 --durations=0
+8 -9
View File
@@ -10,25 +10,23 @@ import torch
import pytorch_lightning as pl
from pl_examples.models.lightning_template import LightningTemplateModel
SEED = 2334
torch.manual_seed(SEED)
np.random.seed(SEED)
pl.seed_everything(234)
def main(hparams):
def main(args):
"""
Main training routine specific for this project
:param hparams:
:param args:
"""
# ------------------------
# 1 INIT LIGHTNING MODEL
# ------------------------
model = LightningTemplateModel(hparams)
model = LightningTemplateModel(**vars(args))
# ------------------------
# 2 INIT TRAINER
# ------------------------
trainer = pl.Trainer(max_epochs=hparams.epochs, overfit_pct=0.01, early_stop_callback=True)
trainer = pl.Trainer.from_argparse_args(args)
# ------------------------
# 3 START TRAINING
@@ -46,9 +44,10 @@ if __name__ == '__main__':
# each LightningModule defines arguments relevant to it
parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir)
hyperparams = parser.parse_args()
parser = pl.Trainer.add_argparse_args(parser)
args = parser.parse_args()
# ---------------------
# RUN TRAINING
# ---------------------
main(hyperparams)
main(args)
+1 -1
View File
@@ -957,7 +957,7 @@ class LightningModule(ABC, DeviceDtypeModuleMixin, GradInformation, ModelIO, Mod
f"is not equal to the computed world size ({world_size}). Ignored.")
torch_backend = "nccl" if self.trainer.on_gpu else "gloo"
log.info(f"initializing proc_rank {proc_rank} world {world_size}")
log.info(f"initializing ddp: LOCAL_RANK: {proc_rank}/{world_size - 1} WORLD_SIZE:{world_size}")
torch_distrib.init_process_group(torch_backend, rank=proc_rank, world_size=world_size)
def configure_apex(
@@ -117,6 +117,11 @@ import os
import re
from abc import ABC, abstractmethod
from typing import Union
import subprocess
import sys
from time import sleep
import numpy as np
from os.path import abspath
import torch
from pytorch_lightning import _logger as log
@@ -311,7 +316,7 @@ class TrainerDDPMixin(ABC):
os.environ["CUDA_DEVICE_ORDER"] = "PCI_BUS_ID"
# when slurm is managing the task it sets the visible devices
if not is_slurm_managing_tasks:
if not is_slurm_managing_tasks and 'CUDA_VISIBLE_DEVICES' not in os.environ:
if isinstance(data_parallel_device_ids, int):
id_str = ','.join(str(x) for x in list(range(data_parallel_device_ids)))
os.environ["CUDA_VISIBLE_DEVICES"] = id_str
@@ -322,7 +327,74 @@ class TrainerDDPMixin(ABC):
# don't make this debug... this is good UX
log.info(f'CUDA_VISIBLE_DEVICES: [{os.environ["CUDA_VISIBLE_DEVICES"]}]')
def ddp_train(self, process_idx, model):
def __set_random_port(self):
"""
When running DDP NOT managed by SLURM, the ports might collide
:return:
"""
try:
default_port = os.environ['MASTER_PORT']
except Exception:
import random
default_port = random.randint(10000, 19000)
os.environ['MASTER_PORT'] = str(default_port)
def spawn_ddp_children(self, model):
self.__set_random_port()
port = os.environ['MASTER_PORT']
master_address = '127.0.0.1' if 'MASTER_ADDR' not in os.environ else os.environ['MASTER_ADDR']
os.environ['MASTER_PORT'] = f'{port}'
os.environ['MASTER_ADDR'] = f'{master_address}'
# allow the user to pass the node rank
node_rank = '0'
if 'NODE_RANK' in os.environ:
node_rank = os.environ['NODE_RANK']
if 'GROUP_RANK' in os.environ:
node_rank = os.environ['GROUP_RANK']
os.environ['NODE_RANK'] = node_rank
os.environ['LOCAL_RANK'] = '0'
# pull out the commands used to run the script and resolve the abs file path
command = sys.argv
full_path = abspath(command[0])
command[0] = full_path
command = ['python'] + command
# since this script sets the visible devices we replace the gpus flag with a number
num_gpus = os.environ['CUDA_VISIBLE_DEVICES'].split(',').__len__()
# if script called without a flag, pass in a flag anyhow
if '--gpus' not in command:
arg_gpus = len(self.gpus) if isinstance(self.gpus, list) else self.gpus
command += ['--gpus', arg_gpus]
gpu_flag_idx = command.index('--gpus')
command[gpu_flag_idx + 1] = f'{num_gpus}'
os.environ['WORLD_SIZE'] = f'{num_gpus * self.num_nodes}'
self.interactive_ddp_procs = []
for local_rank in range(1, self.num_processes):
env_copy = os.environ.copy()
env_copy['LOCAL_RANK'] = f'{local_rank}'
# import pdb; pdb.set_trace()
# start process
proc = subprocess.Popen(command, env=env_copy)
self.interactive_ddp_procs.append(proc)
# starting all processes at once can cause issues
# with dataloaders delay between 1-10 seconds
delay = np.random.uniform(1, 5, 1)[0]
sleep(delay)
local_rank = 0
self.ddp_train(local_rank, model, is_master=True)
def ddp_train(self, process_idx, model, is_master=False):
"""
Entry point into a DP thread
:param gpu_idx:
@@ -359,7 +431,14 @@ class TrainerDDPMixin(ABC):
# MODEL
# copy model to each gpu
if self.on_gpu:
self.root_gpu = process_idx
gpu_idx = process_idx
if is_master:
# source of truth is cuda for gpu idx
gpus = os.environ['CUDA_VISIBLE_DEVICES'].split(',')
local_rank = int(os.environ['LOCAL_RANK'])
gpu_idx = int(gpus[local_rank])
self.root_gpu = gpu_idx
torch.cuda.set_device(self.root_gpu)
model.cuda(self.root_gpu)
@@ -388,9 +467,6 @@ class TrainerDDPMixin(ABC):
# continue training routine
self.run_pretrain_routine(model)
# when ddp ends, we save the model
self.save_spawn_weights(model)
def save_spawn_weights(self, model):
"""
Dump a temporary checkpoint after ddp ends to get weights out of the process
@@ -685,8 +685,18 @@ def sanitize_gpu_ids(gpus):
:return: unmodified gpus variable
"""
all_available_gpus = get_all_available_gpus()
misconfig = False
for gpu in gpus:
if gpu not in all_available_gpus:
misconfig = True
if misconfig:
# sometimes auto ddp might have different flags
# but this is not what the user intended
# correct for the user
if len(gpus) == len(all_available_gpus):
gpus = all_available_gpus
else:
raise MisconfigurationException(f"""
You requested GPUs: {gpus}
But your machine only has: {all_available_gpus}
+14 -24
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@@ -35,7 +35,6 @@ from pytorch_lightning.trainer.lr_finder import TrainerLRFinderMixin
from pytorch_lightning.utilities.exceptions import MisconfigurationException
from pytorch_lightning.utilities import rank_zero_warn, parsing
try:
from apex import amp
except ImportError:
@@ -119,7 +118,7 @@ class Trainer(
distributed_backend: Optional[str] = None,
precision: int = 32,
print_nan_grads: bool = False, # backward compatible, todo: remove in v0.9.0
weights_summary: Optional[str] = 'full',
weights_summary: Optional[str] = 'top',
weights_save_path: Optional[str] = None,
num_sanity_val_steps: int = 2,
truncated_bptt_steps: Optional[int] = None,
@@ -494,6 +493,7 @@ class Trainer(
# init flags for SLURM+ddp to work
self.proc_rank = 0
self.world_size = 1
self.interactive_ddp_procs = []
self.configure_slurm_ddp(self.num_nodes)
self.node_rank = self.determine_ddp_node_rank()
@@ -871,16 +871,12 @@ class Trainer(
task = int(os.environ['LOCAL_RANK'])
self.ddp_train(task, model)
else:
self.__set_random_port()
# track for predict
elif self.distributed_backend == 'cpu_ddp':
self.model = model
# train
mp.spawn(self.ddp_train, nprocs=self.num_processes, args=(model,))
# load weights if not interrupted
if self.on_colab_kaggle:
self.load_spawn_weights(model)
self.model = model
elif self.distributed_backend == 'ddp':
self.spawn_ddp_children(model)
# 1 gpu or dp option triggers training using DP module
# easier to avoid NCCL issues
@@ -928,18 +924,6 @@ class Trainer(
# used for testing or when we need to know that training succeeded
return 1
def __set_random_port(self):
"""
When running DDP NOT managed by SLURM, the ports might collide
:return:
"""
try:
default_port = os.environ['MASTER_PORT']
except Exception:
import random
default_port = random.randint(10000, 19000)
os.environ['MASTER_PORT'] = str(default_port)
def __attach_dataloaders(self, model, train_dataloader=None, val_dataloaders=None, test_dataloaders=None):
# when dataloader is passed via fit, patch the train_dataloader
# functions to overwrite with these implementations
@@ -1046,7 +1030,10 @@ class Trainer(
# clear cache before training
if self.on_gpu:
torch.cuda.empty_cache()
# use context because of:
# https://discuss.pytorch.org/t/out-of-memory-when-i-use-torch-cuda-empty-cache/57898
with torch.cuda.device(f'cuda:{self.root_gpu}'):
torch.cuda.empty_cache()
# CORE TRAINING LOOP
self.train()
@@ -1096,7 +1083,10 @@ class Trainer(
if model is not None:
self.model = model
self.fit(model)
elif self.use_ddp or self.use_tpu: # pragma: no-cover
# on tpu, .spawn means we don't have a trained model
# TODO: remove TPU spawn
elif self.use_tpu: # pragma: no-cover
# attempt to load weights from a spawn
path = os.path.join(self.default_root_dir, '__temp_weight_ddp_end.ckpt')
test_model = self.model
+19 -16
View File
@@ -158,6 +158,7 @@ from pytorch_lightning.loggers import LightningLoggerBase
from pytorch_lightning.trainer.supporters import TensorRunningAccum
from pytorch_lightning.utilities import rank_zero_warn
from pytorch_lightning.utilities.exceptions import MisconfigurationException
import subprocess
try:
from apex import amp
@@ -305,13 +306,13 @@ class TrainerTrainLoopMixin(ABC):
def train(self):
# add signal handlers for process kills
def _signal_kill_handler(*args):
return TrainerTrainLoopMixin.run_training_teardown(self)
orig_signal_handlers = {}
for sig_name in SIGNAL_TERMINATE:
orig_signal_handlers[sig_name] = signal.signal(getattr(signal, sig_name),
_signal_kill_handler)
# def _signal_kill_handler(*args):
# return TrainerTrainLoopMixin.run_training_teardown(self)
#
# orig_signal_handlers = {}
# for sig_name in SIGNAL_TERMINATE:
# orig_signal_handlers[sig_name] = signal.signal(getattr(signal, sig_name),
# _signal_kill_handler)
# get model
model = self.get_model()
@@ -384,15 +385,17 @@ class TrainerTrainLoopMixin(ABC):
self.run_training_teardown()
# reset signal handlers
for sig_name in SIGNAL_TERMINATE:
signal.signal(getattr(signal, sig_name), orig_signal_handlers[sig_name])
except KeyboardInterrupt:
if self.proc_rank == 0:
log.info('Detected KeyboardInterrupt, attempting graceful shutdown...')
self.interrupted = True
self.run_training_teardown()
rank_zero_warn('Detected KeyboardInterrupt, attempting graceful shutdown...')
# user could press ctrl+c many times... only shutdown once
if not self.interrupted:
self.interrupted = True
for proc in self.interactive_ddp_procs:
subprocess.Popen.kill(proc)
self.run_training_teardown()
def run_training_epoch(self):
@@ -678,7 +681,7 @@ class TrainerTrainLoopMixin(ABC):
opt_idx = np.argmax(optimizer_freq_cumsum > current_place_in_loop)
return [(opt_idx, self.optimizers[opt_idx])]
@atexit.register
# @atexit.register
def run_training_teardown(self):
if hasattr(self, '_teardown_already_run') and self._teardown_already_run:
return
+1 -1
View File
@@ -12,7 +12,7 @@ class ModelTemplateData:
loader = DataLoader(
dataset=dataset,
batch_size=self.batch_size,
# test and valid shall not be shuffled
num_workers=3,
shuffle=train,
)
return loader
+2 -2
View File
@@ -25,7 +25,7 @@ def assert_speed_parity(pl_times, pt_times, num_epochs):
f"lightning was slower than PT (threshold {max_diff_per_epoch})"
def run_model_test_without_loggers(trainer_options, model, min_acc=0.50):
def run_model_test_without_loggers(trainer_options, model, min_acc=0.30):
reset_seed()
# fit model
@@ -155,7 +155,7 @@ def load_model_from_checkpoint(root_weights_dir, module_class=EvalModelTemplate)
return trained_model
def run_prediction(dataloader, trained_model, dp=False, min_acc=0.5):
def run_prediction(dataloader, trained_model, dp=False, min_acc=0.3):
# run prediction on 1 batch
for batch in dataloader:
break
+3 -3
View File
@@ -220,7 +220,7 @@ def test_early_stopping_no_val_step(tmpdir):
default_root_dir=tmpdir,
early_stop_callback=stopping,
overfit_pct=0.20,
max_epochs=5,
max_epochs=2,
)
result = trainer.fit(model)
@@ -254,7 +254,7 @@ def test_model_checkpoint_with_non_string_input(tmpdir, save_top_k):
trainer = Trainer(default_root_dir=tmpdir,
checkpoint_callback=checkpoint,
overfit_pct=0.20,
max_epochs=5
max_epochs=2
)
trainer.fit(model)
@@ -275,7 +275,7 @@ def test_model_checkpoint_path(tmpdir, logger_version, expected):
trainer = Trainer(
default_root_dir=tmpdir,
overfit_pct=0.2,
max_epochs=5,
max_epochs=2,
logger=logger
)
trainer.fit(model)
+4 -4
View File
@@ -16,7 +16,7 @@ def test_lr_logger_single_lr(tmpdir):
lr_logger = LearningRateLogger()
trainer = Trainer(
default_root_dir=tmpdir,
max_epochs=5,
max_epochs=2,
val_percent_check=0.1,
train_percent_check=0.5,
callbacks=[lr_logger]
@@ -39,7 +39,7 @@ def test_lr_logger_no_lr(tmpdir):
lr_logger = LearningRateLogger()
trainer = Trainer(
default_root_dir=tmpdir,
max_epochs=5,
max_epochs=2,
val_percent_check=0.1,
train_percent_check=0.5,
callbacks=[lr_logger]
@@ -60,7 +60,7 @@ def test_lr_logger_multi_lrs(tmpdir):
lr_logger = LearningRateLogger()
trainer = Trainer(
default_root_dir=tmpdir,
max_epochs=10,
max_epochs=2,
val_percent_check=0.1,
train_percent_check=0.5,
callbacks=[lr_logger]
@@ -87,7 +87,7 @@ def test_lr_logger_param_groups(tmpdir):
lr_logger = LearningRateLogger()
trainer = Trainer(
default_root_dir=tmpdir,
max_epochs=5,
max_epochs=2,
val_percent_check=0.1,
train_percent_check=0.5,
callbacks=[lr_logger]
+1 -1
View File
@@ -100,7 +100,7 @@ def test_loggers_pickle(tmpdir, monkeypatch, logger_class):
@pytest.mark.parametrize("extra_params", [
pytest.param(dict(max_epochs=1, auto_scale_batch_size=True), id='Batch-size-Finder'),
pytest.param(dict(max_epochs=10, auto_lr_find=True), id='LR-Finder'),
pytest.param(dict(max_epochs=3, auto_lr_find=True), id='LR-Finder'),
])
def test_logger_reset_correctly(tmpdir, extra_params):
""" Test that the tuners do not alter the logger reference """
+1 -1
View File
@@ -143,7 +143,7 @@ def test_adding_step_key(tmpdir):
model.validation_epoch_end = _validation_epoch_end
model.training_epoch_end = _training_epoch_end
trainer = Trainer(
max_epochs=4,
max_epochs=3,
default_root_dir=tmpdir,
train_percent_check=0.001,
val_percent_check=0.01,
+79 -21
View File
@@ -1,3 +1,4 @@
import os
import platform
from collections import namedtuple
@@ -9,6 +10,77 @@ import tests.base.utils as tutils
from pytorch_lightning import Trainer
from pytorch_lightning.callbacks import EarlyStopping
from tests.base import EvalModelTemplate
from pytorch_lightning.callbacks import ModelCheckpoint
def test_cpu_slurm_save_load(tmpdir):
"""Verify model save/load/checkpoint on CPU."""
hparams = EvalModelTemplate.get_default_hparams()
model = EvalModelTemplate(**hparams)
# logger file to get meta
logger = tutils.get_default_logger(tmpdir)
version = logger.version
# fit model
trainer = Trainer(
max_epochs=1,
logger=logger,
train_percent_check=0.2,
val_percent_check=0.2,
checkpoint_callback=ModelCheckpoint(tmpdir)
)
result = trainer.fit(model)
real_global_step = trainer.global_step
# traning complete
assert result == 1, 'cpu model failed to complete'
# predict with trained model before saving
# make a prediction
dataloaders = model.test_dataloader()
if not isinstance(dataloaders, list):
dataloaders = [dataloaders]
for dataloader in dataloaders:
for batch in dataloader:
break
x, y = batch
x = x.view(x.size(0), -1)
model.eval()
pred_before_saving = model(x)
# test HPC saving
# simulate snapshot on slurm
saved_filepath = trainer.hpc_save(tmpdir, logger)
assert os.path.exists(saved_filepath)
# new logger file to get meta
logger = tutils.get_default_logger(tmpdir, version=version)
trainer = Trainer(
max_epochs=1,
logger=logger,
checkpoint_callback=ModelCheckpoint(tmpdir),
)
model = EvalModelTemplate(**hparams)
# set the epoch start hook so we can predict before the model does the full training
def assert_pred_same():
assert trainer.global_step == real_global_step and trainer.global_step > 0
# predict with loaded model to make sure answers are the same
trainer.model.eval()
new_pred = trainer.model(x)
assert torch.all(torch.eq(pred_before_saving, new_pred)).item() == 1
model.on_epoch_start = assert_pred_same
# by calling fit again, we trigger training, loading weights from the cluster
# and our hook to predict using current model before any more weight updates
trainer.fit(model)
def test_early_stopping_cpu_model(tmpdir):
@@ -17,6 +89,7 @@ def test_early_stopping_cpu_model(tmpdir):
trainer_options = dict(
default_root_dir=tmpdir,
early_stop_callback=stopping,
max_epochs=2,
gradient_clip_val=1.0,
overfit_pct=0.20,
track_grad_norm=2,
@@ -39,6 +112,7 @@ def test_early_stopping_cpu_model(tmpdir):
version_parse(torch.__version__) < version_parse("1.3.0")),
reason="Distributed training is not supported on MacOS before Torch 1.3.0")
def test_multi_cpu_model_ddp(tmpdir):
print('in ddp test')
"""Make sure DDP works."""
tutils.set_random_master_port()
@@ -61,19 +135,19 @@ def test_lbfgs_cpu_model(tmpdir):
"""Test each of the trainer options."""
trainer_options = dict(
default_root_dir=tmpdir,
max_epochs=2,
max_epochs=1,
progress_bar_refresh_rate=0,
weights_summary='top',
train_percent_check=1.0,
train_percent_check=0.2,
val_percent_check=0.2,
)
hparams = EvalModelTemplate.get_default_hparams()
hparams.update(optimizer_name='lbfgs',
learning_rate=0.002)
learning_rate=0.004)
model = EvalModelTemplate(**hparams)
model.configure_optimizers = model.configure_optimizers__lbfgs
tutils.run_model_test_without_loggers(trainer_options, model, min_acc=0.5)
tutils.run_model_test_without_loggers(trainer_options, model, min_acc=0.25)
def test_default_logger_callbacks_cpu_model(tmpdir):
@@ -110,7 +184,7 @@ def test_running_test_after_fitting(tmpdir):
trainer = Trainer(
default_root_dir=tmpdir,
progress_bar_refresh_rate=0,
max_epochs=8,
max_epochs=2,
train_percent_check=0.4,
val_percent_check=0.2,
test_percent_check=0.2,
@@ -324,19 +398,3 @@ def test_tbptt_cpu_model(tmpdir):
result = trainer.fit(model)
assert result == 1, 'training failed to complete'
@pytest.mark.skipif(not torch.cuda.is_available(), reason="test requires GPU machine")
def test_single_gpu_model(tmpdir):
"""Make sure single GPU works (DP mode)."""
trainer_options = dict(
default_root_dir=tmpdir,
progress_bar_refresh_rate=0,
max_epochs=1,
train_percent_check=0.1,
val_percent_check=0.1,
gpus=1
)
model = EvalModelTemplate()
tutils.run_model_test(trainer_options, model)
+20 -71
View File
@@ -5,7 +5,6 @@ import torch
import tests.base.utils as tutils
from pytorch_lightning import Trainer
from pytorch_lightning.callbacks import ModelCheckpoint
from pytorch_lightning.core import memory
from pytorch_lightning.trainer.distrib_parts import parse_gpu_ids, determine_root_gpu_device
from pytorch_lightning.utilities.exceptions import MisconfigurationException
@@ -14,6 +13,23 @@ from tests.base import EvalModelTemplate
PRETEND_N_OF_GPUS = 16
@pytest.mark.skipif(not torch.cuda.is_available(), reason="test requires GPU machine")
@pytest.mark.parametrize('gpus', [1, [0], [1]])
def test_single_gpu_model(tmpdir, gpus):
"""Make sure single GPU works (DP mode)."""
trainer_options = dict(
default_root_dir=tmpdir,
progress_bar_refresh_rate=0,
max_epochs=1,
train_percent_check=0.1,
val_percent_check=0.1,
gpus=gpus
)
model = EvalModelTemplate()
tutils.run_model_test(trainer_options, model)
@pytest.mark.spawn
@pytest.mark.parametrize("backend", ['dp', 'ddp', 'ddp2'])
@pytest.mark.skipif(torch.cuda.device_count() < 2, reason="test requires multi-GPU machine")
@@ -40,6 +56,7 @@ def test_multi_gpu_model(tmpdir, backend):
memory.get_memory_profile('min_max')
@pytest.mark.spawn
@pytest.mark.skipif(torch.cuda.device_count() < 2, reason="test requires multi-GPU machine")
def test_ddp_all_dataloaders_passed_to_fit(tmpdir):
"""Make sure DDP works with dataloaders passed to fit()"""
@@ -48,8 +65,8 @@ def test_ddp_all_dataloaders_passed_to_fit(tmpdir):
trainer_options = dict(default_root_dir=tmpdir,
progress_bar_refresh_rate=0,
max_epochs=1,
train_percent_check=0.4,
val_percent_check=0.2,
train_percent_check=0.1,
val_percent_check=0.1,
gpus=[0, 1],
distributed_backend='ddp')
@@ -62,74 +79,6 @@ def test_ddp_all_dataloaders_passed_to_fit(tmpdir):
assert result == 1, "DDP doesn't work with dataloaders passed to fit()."
def test_cpu_slurm_save_load(tmpdir):
"""Verify model save/load/checkpoint on CPU."""
hparams = EvalModelTemplate.get_default_hparams()
model = EvalModelTemplate(**hparams)
# logger file to get meta
logger = tutils.get_default_logger(tmpdir)
version = logger.version
# fit model
trainer = Trainer(
max_epochs=1,
logger=logger,
checkpoint_callback=ModelCheckpoint(tmpdir)
)
result = trainer.fit(model)
real_global_step = trainer.global_step
# traning complete
assert result == 1, 'cpu model failed to complete'
# predict with trained model before saving
# make a prediction
dataloaders = model.test_dataloader()
if not isinstance(dataloaders, list):
dataloaders = [dataloaders]
for dataloader in dataloaders:
for batch in dataloader:
break
x, y = batch
x = x.view(x.size(0), -1)
model.eval()
pred_before_saving = model(x)
# test HPC saving
# simulate snapshot on slurm
saved_filepath = trainer.hpc_save(tmpdir, logger)
assert os.path.exists(saved_filepath)
# new logger file to get meta
logger = tutils.get_default_logger(tmpdir, version=version)
trainer = Trainer(
max_epochs=1,
logger=logger,
checkpoint_callback=ModelCheckpoint(tmpdir),
)
model = EvalModelTemplate(**hparams)
# set the epoch start hook so we can predict before the model does the full training
def assert_pred_same():
assert trainer.global_step == real_global_step and trainer.global_step > 0
# predict with loaded model to make sure answers are the same
trainer.model.eval()
new_pred = trainer.model(x)
assert torch.all(torch.eq(pred_before_saving, new_pred)).item() == 1
model.on_epoch_start = assert_pred_same
# by calling fit again, we trigger training, loading weights from the cluster
# and our hook to predict using current model before any more weight updates
trainer.fit(model)
@pytest.mark.spawn
@pytest.mark.skipif(torch.cuda.device_count() < 2, reason="test requires multi-GPU machine")
def test_multi_gpu_none_backend(tmpdir):
+1 -1
View File
@@ -76,7 +76,7 @@ def test_running_test_pretrained_model_cpu(tmpdir):
trainer_options = dict(
progress_bar_refresh_rate=0,
max_epochs=4,
max_epochs=3,
train_percent_check=0.4,
val_percent_check=0.2,
checkpoint_callback=checkpoint,
+26 -4
View File
@@ -249,6 +249,8 @@ def test_mixing_of_dataloader_options(tmpdir):
def test_train_inf_dataloader_error(tmpdir):
pytest.skip('TODO: fix speed of this test')
"""Test inf train data loader (e.g. IterableDataset)"""
model = EvalModelTemplate()
model.train_dataloader = model.train_dataloader__infinite
@@ -260,6 +262,8 @@ def test_train_inf_dataloader_error(tmpdir):
def test_val_inf_dataloader_error(tmpdir):
pytest.skip('TODO: fix speed of this test')
"""Test inf train data loader (e.g. IterableDataset)"""
model = EvalModelTemplate()
model.val_dataloader = model.val_dataloader__infinite
@@ -271,6 +275,8 @@ def test_val_inf_dataloader_error(tmpdir):
def test_test_inf_dataloader_error(tmpdir):
pytest.skip('TODO: fix speed of this test')
"""Test inf train data loader (e.g. IterableDataset)"""
model = EvalModelTemplate()
model.test_dataloader = model.test_dataloader__infinite
@@ -283,6 +289,8 @@ def test_test_inf_dataloader_error(tmpdir):
@pytest.mark.parametrize('check_interval', [50, 1.0])
def test_inf_train_dataloader(tmpdir, check_interval):
pytest.skip('TODO: fix speed of this test')
"""Test inf train data loader (e.g. IterableDataset)"""
model = EvalModelTemplate()
@@ -300,6 +308,8 @@ def test_inf_train_dataloader(tmpdir, check_interval):
@pytest.mark.parametrize('check_interval', [1.0])
def test_inf_val_dataloader(tmpdir, check_interval):
pytest.skip('TODO: fix speed of this test')
"""Test inf val data loader (e.g. IterableDataset)"""
model = EvalModelTemplate()
@@ -328,7 +338,9 @@ def test_error_on_zero_len_dataloader(tmpdir):
trainer = Trainer(
default_root_dir=tmpdir,
max_epochs=1,
test_percent_check=0.5
train_percent_check=0.1,
val_percent_check=0.1,
test_percent_check=0.1
)
trainer.fit(model)
@@ -347,9 +359,18 @@ def test_warning_with_few_workers(tmpdir):
train_percent_check=0.2
)
fit_options = dict(train_dataloader=model.dataloader(train=True),
val_dataloaders=model.dataloader(train=False))
test_options = dict(test_dataloaders=model.dataloader(train=False))
train_dl = model.dataloader(train=True)
train_dl.num_workers = 0
val_dl = model.dataloader(train=False)
val_dl.num_workers = 0
train_dl = model.dataloader(train=False)
train_dl.num_workers = 0
fit_options = dict(train_dataloader=train_dl,
val_dataloaders=val_dl)
test_options = dict(test_dataloaders=train_dl)
trainer = Trainer(**trainer_options)
@@ -436,6 +457,7 @@ def test_batch_size_smaller_than_num_gpus():
trainer = Trainer(
max_epochs=1,
train_percent_check=0.1,
val_percent_check=0,
gpus=num_gpus,
)
+8 -6
View File
@@ -83,7 +83,7 @@ def test_trainer_arg_bool(tmpdir):
# logger file to get meta
trainer = Trainer(
default_save_path=tmpdir,
max_epochs=5,
max_epochs=2,
auto_lr_find=True
)
@@ -102,7 +102,7 @@ def test_trainer_arg_str(tmpdir):
# logger file to get meta
trainer = Trainer(
default_save_path=tmpdir,
max_epochs=5,
max_epochs=2,
auto_lr_find='my_fancy_lr'
)
@@ -122,7 +122,7 @@ def test_call_to_trainer_method(tmpdir):
# logger file to get meta
trainer = Trainer(
default_save_path=tmpdir,
max_epochs=5,
max_epochs=2,
)
lrfinder = trainer.lr_find(model, mode='linear')
@@ -135,6 +135,8 @@ def test_call_to_trainer_method(tmpdir):
def test_accumulation_and_early_stopping(tmpdir):
pytest.skip('TODO: speed up this test')
""" Test that early stopping of learning rate finder works, and that
accumulation also works for this feature """
@@ -145,7 +147,7 @@ def test_accumulation_and_early_stopping(tmpdir):
# logger file to get meta
trainer = Trainer(
default_save_path=tmpdir,
accumulate_grad_batches=2
accumulate_grad_batches=2,
)
lrfinder = trainer.lr_find(model, early_stop_threshold=None)
@@ -168,7 +170,7 @@ def test_suggestion_parameters_work(tmpdir):
# logger file to get meta
trainer = Trainer(
default_save_path=tmpdir,
max_epochs=10,
max_epochs=3,
)
lrfinder = trainer.lr_find(model)
@@ -188,7 +190,7 @@ def test_suggestion_with_non_finite_values(tmpdir):
# logger file to get meta
trainer = Trainer(
default_save_path=tmpdir,
max_epochs=10
max_epochs=3
)
lrfinder = trainer.lr_find(model)
+1 -1
View File
@@ -445,7 +445,7 @@ def test_trainer_min_steps_and_epochs(tmpdir):
early_stop_callback=EarlyStopping(monitor='val_loss', min_delta=1.0),
val_check_interval=2,
min_epochs=1,
max_epochs=5
max_epochs=2
)
# define less min steps than 1 epoch