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+4
-2
@@ -1,4 +1,7 @@
|
||||
#see https://github.com/codecov/support/wiki/Codecov-Yaml
|
||||
# see https://docs.codecov.io/docs/codecov-yaml
|
||||
# Validation check:
|
||||
# $ curl --data-binary @.codecov.yml https://codecov.io/validate
|
||||
|
||||
codecov:
|
||||
notify:
|
||||
require_ci_to_pass: yes
|
||||
@@ -41,4 +44,3 @@ comment:
|
||||
behavior: default # update if exists else create new
|
||||
# branches: *
|
||||
|
||||
|
||||
|
||||
@@ -1,5 +1,10 @@
|
||||
# Contributing
|
||||
Welcome to the PyTorch Lightning community! We're building the most advanced research platform on the planet to implement the latest, best practices that the amazing PyTorch team rolls out!
|
||||
Welcome to the PyTorch Lightning community! We're building the most advanced research platform on the planet to implement the latest, best practices that the amazing PyTorch team rolls out!
|
||||
|
||||
## One less thing to remember
|
||||
Simplify the API as much as possible from the user perspective. Any additions or improvements should minimize things the user needs to remember.
|
||||
|
||||
For example: One benefit of the validation_step is that the user doesn't have to remember to set the model to .eval(). This avoids all sorts of subtle errors the user could make.
|
||||
|
||||
## Lightning Design Principles
|
||||
We encourage all sorts of contributions you're interested in adding! When coding for lightning, please follow these principles.
|
||||
@@ -0,0 +1,16 @@
|
||||
# Before submitting
|
||||
|
||||
- Was this discussed/approved via a Github issue? (no need for typos, doc improvements)
|
||||
- Did you read the [contributor guideline](https://github.com/williamFalcon/pytorch-lightning/blob/master/.github/CONTRIBUTING.md)?
|
||||
- Did you make sure to update the docs?
|
||||
- Did you write any new necessary tests?
|
||||
|
||||
## What does this PR do?
|
||||
Fixes # (issue).
|
||||
|
||||
## PR review
|
||||
Anyone in the community is free to review the PR once the tests have passed.
|
||||
If we didn't discuss your PR in Github issues there's a high chance it will not be merged.
|
||||
|
||||
## Did you have fun?
|
||||
Make sure you had fun coding 🙃
|
||||
@@ -11,6 +11,7 @@ pip-wheel-metadata/
|
||||
test_tube_exp/
|
||||
tests/tests_tt_dir/
|
||||
tests/save_dir
|
||||
default/
|
||||
|
||||
# Byte-compiled / optimized / DLL files
|
||||
__pycache__/
|
||||
|
||||
+28
-4
@@ -8,8 +8,6 @@
|
||||
# this file is *not* meant to cover or endorse the use of travis, but rather to
|
||||
# help confirm pull requests to this project.
|
||||
|
||||
dist: xenial # Ubuntu 16.04
|
||||
|
||||
env:
|
||||
global:
|
||||
- DISPLAY=""
|
||||
@@ -18,10 +16,36 @@ language: python
|
||||
|
||||
matrix:
|
||||
include:
|
||||
- python: 3.6
|
||||
- os: linux
|
||||
dist: xenial # Ubuntu 16.04
|
||||
python: 3.6
|
||||
env: TOXENV=py36
|
||||
- python: 3.7
|
||||
- os: linux
|
||||
dist: bionic # Ubuntu 18.04
|
||||
python: 3.6
|
||||
env: TOXENV=py36
|
||||
- os: linux
|
||||
dist: bionic # Ubuntu 18.04
|
||||
python: 3.7
|
||||
env: TOXENV=py37
|
||||
- os: osx
|
||||
osx_image: xcode9.4
|
||||
language: generic
|
||||
env: TOXENV=py36
|
||||
addons:
|
||||
homebrew:
|
||||
# update: true
|
||||
packages: python3
|
||||
before_install:
|
||||
- pip3 install virtualenv
|
||||
- virtualenv -p python3 ~/venv
|
||||
- source ~/venv/bin/activate
|
||||
# - os: windows
|
||||
# language: minimal
|
||||
# before_install:
|
||||
# - choco install python3
|
||||
# - export PATH="/c/Python37:/c/Python37/Scripts:$PATH"
|
||||
# env: TOXENV=py37
|
||||
|
||||
# See http://docs.travis-ci.com/user/caching/#pip-cache
|
||||
cache: pip
|
||||
|
||||
+6
-1
@@ -13,11 +13,16 @@ include LICENSE
|
||||
exclude *.sh
|
||||
exclude *.toml
|
||||
exclude *.svg
|
||||
recursive-include examples *.py
|
||||
recursive-include pytorch_lightning *.py
|
||||
|
||||
# include examples
|
||||
recursive-include examples *.py
|
||||
recursive-include examples *.md
|
||||
recursive-include examples *.sh
|
||||
|
||||
# exclude tests from package
|
||||
recursive-exclude tests *
|
||||
recursive-exclude site *
|
||||
exclude tests
|
||||
|
||||
# Exclude the documentation files
|
||||
|
||||
@@ -4,23 +4,23 @@
|
||||
|
||||
# PyTorch Lightning
|
||||
|
||||
**The PyTorch Keras for ML researchers. More control. Less boilerplate.**
|
||||
**The lightweight PyTorch wrapper for ML researchers. Scale your models. Write less boilerplate.**
|
||||
|
||||
|
||||
[](https://badge.fury.io/py/pytorch-lightning)
|
||||
[](https://pepy.tech/project/pytorch-lightning)
|
||||
[](https://travis-ci.org/williamFalcon/pytorch-lightning)
|
||||
<!--
|
||||
removed until windows install issues resolved.
|
||||
[](https://ci.appveyor.com/project/Borda/pytorch-lightning) -->
|
||||
[](https://ci.appveyor.com/project/Borda/pytorch-lightning)
|
||||
[](https://github.com/williamFalcon/pytorch-lightning/tree/master/tests#running-coverage)
|
||||
[](https://www.codefactor.io/repository/github/borda/pytorch-lightning)
|
||||
|
||||
[](https://pytorch-lightning.readthedocs.io/en/latest)
|
||||
[](https://gitter.im/PyTorch-Lightning/community?utm_source=badge&utm_medium=badge&utm_campaign=pr-badge)
|
||||
[](https://github.com/williamFalcon/pytorch-lightning/blob/master/LICENSE)
|
||||
<!--
|
||||
removed until codecov badge isn't empy. likely a config error showing nothing on master.
|
||||
[](https://codecov.io/gh/Borda/pytorch-lightning)
|
||||
-->
|
||||
[](https://github.com/williamFalcon/pytorch-lightning/tree/master/tests#running-coverage)
|
||||
[](https://www.codefactor.io/repository/github/borda/pytorch-lightning)
|
||||
[](https://pytorch-lightning.readthedocs.io/en/latest)
|
||||
[](https://github.com/williamFalcon/pytorch-lightning/blob/master/LICENSE)
|
||||
|
||||
</div>
|
||||
|
||||
@@ -33,17 +33,18 @@ pip install pytorch-lightning
|
||||
**[View the docs here](https://williamfalcon.github.io/pytorch-lightning/)**
|
||||
|
||||
## What is it?
|
||||
Lightning is a very lightweight wrapper on PyTorch. This means you don't have to learn a new library. It defers core training and validation logic to you and automates the rest. It guarantees tested, correct, modern best practices for the automated parts.
|
||||
Lightning is a very lightweight wrapper on PyTorch. This means you don't have to learn a new library. To use Lightning, simply refactor your research code into the [LightningModule](https://github.com/williamFalcon/pytorch-lightning#how-do-i-do-use-it) format and Lightning will automate the rest. Lightning guarantees tested, correct, modern best practices for the automated parts.
|
||||
|
||||
## Starting a new project?
|
||||
[Use our seed-project aimed at reproducibility!](https://github.com/williamFalcon/pytorch-lightning-conference-seed)
|
||||
|
||||
## Why do I want to use lightning?
|
||||
When starting a new project the last thing you want to do is recode a training loop, multi-cluster training, 16-bit precision, early-stopping, model loading/saving, when to validate, etc... You're likely to spend a long time ironing out all the bugs without even getting to the core of your research.
|
||||
Every research project starts the same, a model, a training loop, validation loop, etc. As your research advances, you're likely to need distributed training, 16-bit precision, checkpointing, gradient accumulation, etc.
|
||||
|
||||
With lightning, you guarantee those parts of your code work so you can focus on what the meat of the research: The data and the training/validation loop logic.
|
||||
Lightning sets up all the boilerplate state-of-the-art training for you so you can focus on the research.
|
||||
|
||||
Don't worry about training on multiple gpus or speeding up your code, lightning will do that for you!
|
||||
|
||||
---
|
||||
---
|
||||
|
||||
## README Table of Contents
|
||||
- [How do I use it](https://github.com/williamFalcon/pytorch-lightning#how-do-i-do-use-it)
|
||||
- [What lightning automates](https://github.com/williamFalcon/pytorch-lightning#what-does-lightning-control-for-me)
|
||||
@@ -53,14 +54,19 @@ Don't worry about training on multiple gpus or speeding up your code, lightning
|
||||
- [Tutorials](https://github.com/williamFalcon/pytorch-lightning#tutorials)
|
||||
- [Contributing](https://github.com/williamFalcon/pytorch-lightning/blob/master/CONTRIBUTING.md)
|
||||
- [Bleeding edge install](https://github.com/williamFalcon/pytorch-lightning#bleeding-edge)
|
||||
- [Lightning Design Principles](https://github.com/williamFalcon/pytorch-lightning#lightning-design-principles)
|
||||
- [Lightning Design Principles](https://github.com/williamFalcon/pytorch-lightning#lightning-design-principles)
|
||||
- [Asking for help](https://github.com/williamFalcon/pytorch-lightning#asking-for-help)
|
||||
- [FAQ](https://github.com/williamFalcon/pytorch-lightning#faq)
|
||||
|
||||
---
|
||||
---
|
||||
|
||||
## How do I do use it?
|
||||
Think about Lightning as refactoring your research code instead of using a new framework. The research code goes into a [LightningModule]((https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/)) which you fit using a Trainer.
|
||||
|
||||
The LightningModule defines a *system* such as seq-2-seq, GAN, etc... It can ALSO define a simple classifier such as the example below.
|
||||
|
||||
To use lightning do 2 things:
|
||||
1. [Define a LightningModel](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/)
|
||||
1. [Define a LightningModule](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/)
|
||||
```python
|
||||
import os
|
||||
import torch
|
||||
@@ -71,10 +77,10 @@ import torchvision.transforms as transforms
|
||||
|
||||
import pytorch_lightning as pl
|
||||
|
||||
class CoolModel(pl.LightningModule):
|
||||
class CoolSystem(pl.LightningModule):
|
||||
|
||||
def __init__(self):
|
||||
super(CoolModel, self).__init__()
|
||||
super(CoolSystem, self).__init__()
|
||||
# not the best model...
|
||||
self.l1 = torch.nn.Linear(28 * 28, 10)
|
||||
|
||||
@@ -100,7 +106,8 @@ class CoolModel(pl.LightningModule):
|
||||
|
||||
def configure_optimizers(self):
|
||||
# REQUIRED
|
||||
return [torch.optim.Adam(self.parameters(), lr=0.02)]
|
||||
# can return multiple optimizers and learning_rate schedulers
|
||||
return torch.optim.Adam(self.parameters(), lr=0.02)
|
||||
|
||||
@pl.data_loader
|
||||
def tng_dataloader(self):
|
||||
@@ -117,19 +124,18 @@ class CoolModel(pl.LightningModule):
|
||||
# OPTIONAL
|
||||
return DataLoader(MNIST(os.getcwd(), train=True, download=True, transform=transforms.ToTensor()), batch_size=32)
|
||||
```
|
||||
|
||||
2. Fit with a [trainer](https://williamfalcon.github.io/pytorch-lightning/Trainer/)
|
||||
```python
|
||||
from pytorch_lightning import Trainer
|
||||
|
||||
model = CoolModel()
|
||||
model = CoolSystem()
|
||||
|
||||
# most basic trainer, uses good defaults
|
||||
trainer = Trainer()
|
||||
trainer.fit(model)
|
||||
```
|
||||
|
||||
Or with tensorboard logger and some options turned on such as multi-gpu, etc...
|
||||
Or with tensorboard logger and some options turned on such as multi-gpu, etc...
|
||||
```python
|
||||
from test_tube import Experiment
|
||||
|
||||
@@ -154,6 +160,11 @@ print('View tensorboard logs by running\ntensorboard --logdir %s' % os.getcwd())
|
||||
print('and going to http://localhost:6006 on your browser')
|
||||
```
|
||||
|
||||
When you're all done you can even run the test set separately.
|
||||
```python
|
||||
trainer.test()
|
||||
```
|
||||
|
||||
## What does lightning control for me?
|
||||
|
||||
Everything in gray!
|
||||
@@ -161,7 +172,7 @@ You define the blue parts using the LightningModule interface:
|
||||
|
||||

|
||||
|
||||
```{.python}
|
||||
```python
|
||||
# what to do in the training loop
|
||||
def training_step(self, data_batch, batch_nb):
|
||||
|
||||
@@ -247,10 +258,10 @@ Lightning also adds a text column with all the hyperparameters for this experime
|
||||
|
||||

|
||||
|
||||
Simply note the path you set for the Experiment
|
||||
``` {.python}
|
||||
Simply note the path you set for the [Experiment](https://williamfalcon.github.io/test-tube/experiment_tracking/experiment/) from [test_tube](https://github.com/williamFalcon/test-tube)
|
||||
```python
|
||||
from test_tube import Experiment
|
||||
from pytorch-lightning import Trainer
|
||||
from pytorch_lightning import Trainer
|
||||
|
||||
exp = Experiment(save_dir='/some/path')
|
||||
trainer = Trainer(experiment=exp)
|
||||
@@ -265,18 +276,18 @@ tensorboard --logdir /some/path
|
||||
## Lightning automates all of the following ([each is also configurable](https://williamfalcon.github.io/pytorch-lightning/Trainer/)):
|
||||
|
||||
|
||||
###### Checkpointing
|
||||
#### Checkpointing
|
||||
|
||||
- [Model saving](https://williamfalcon.github.io/pytorch-lightning/Trainer/Checkpointing/#model-saving)
|
||||
- [Model loading](https://williamfalcon.github.io/pytorch-lightning/LightningModule/methods/#load-from-metrics)
|
||||
- [Restoring training session](https://williamfalcon.github.io/pytorch-lightning/Trainer/Checkpointing/#restoring-training-session)
|
||||
|
||||
###### Computing cluster (SLURM)
|
||||
#### Computing cluster (SLURM)
|
||||
|
||||
- [Running grid search on a cluster](https://williamfalcon.github.io/pytorch-lightning/Trainer/SLURM%20Managed%20Cluster#running-grid-search-on-a-cluster)
|
||||
- [Walltime auto-resubmit](https://williamfalcon.github.io/pytorch-lightning/Trainer/SLURM%20Managed%20Cluster#walltime-auto-resubmit)
|
||||
|
||||
###### Debugging
|
||||
#### Debugging
|
||||
|
||||
- [Fast dev run](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#fast-dev-run)
|
||||
- [Inspect gradient norms](https://williamfalcon.github.io/pytorch-lightning/Trainer/debugging/#inspect-gradient-norms)
|
||||
@@ -287,7 +298,7 @@ tensorboard --logdir /some/path
|
||||
- [Print input and output size of every module in system](https://williamfalcon.github.io/pytorch-lightning/LightningModule/properties/#example_input_array)
|
||||
|
||||
|
||||
###### Distributed training
|
||||
#### Distributed training
|
||||
|
||||
- [16-bit mixed precision](https://williamfalcon.github.io/pytorch-lightning/Trainer/Distributed%20training/#16-bit-mixed-precision)
|
||||
- [Multi-GPU](https://williamfalcon.github.io/pytorch-lightning/Trainer/Distributed%20training/#Multi-GPU)
|
||||
@@ -296,7 +307,7 @@ tensorboard --logdir /some/path
|
||||
- [Self-balancing architecture](https://williamfalcon.github.io/pytorch-lightning/Trainer/Distributed%20training/#self-balancing-architecture)
|
||||
|
||||
|
||||
###### Experiment Logging
|
||||
#### Experiment Logging
|
||||
|
||||
- [Display metrics in progress bar](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#display-metrics-in-progress-bar)
|
||||
- [Log metric row every k batches](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#log-metric-row-every-k-batches)
|
||||
@@ -306,7 +317,7 @@ tensorboard --logdir /some/path
|
||||
- [Snapshot code for a training run](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#snapshot-code-for-a-training-run)
|
||||
- [Write logs file to csv every k batches](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#write-logs-file-to-csv-every-k-batches)
|
||||
|
||||
###### Training loop
|
||||
#### Training loop
|
||||
|
||||
- [Accumulate gradients](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#accumulated-gradients)
|
||||
- [Force training for min or max epochs](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#force-training-for-min-or-max-epochs)
|
||||
@@ -316,8 +327,9 @@ tensorboard --logdir /some/path
|
||||
- [Learning rate scheduling](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#configure_optimizers)
|
||||
- [Use multiple optimizers (like GANs)](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#configure_optimizers)
|
||||
- [Set how much of the training set to check (1-100%)](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#set-how-much-of-the-training-set-to-check)
|
||||
- [Step optimizers at arbitrary intervals](https://williamfalcon.github.io/pytorch-lightning/Trainer/hooks/#optimizer_step)
|
||||
|
||||
###### Validation loop
|
||||
#### Validation loop
|
||||
|
||||
- [Check validation every n epochs](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#check-validation-every-n-epochs)
|
||||
- [Hooks](https://williamfalcon.github.io/pytorch-lightning/Trainer/hooks/)
|
||||
@@ -326,11 +338,13 @@ tensorboard --logdir /some/path
|
||||
- [Set validation check frequency within 1 training epoch](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-validation-check-frequency-within-1-training-epoch)
|
||||
- [Set the number of validation sanity steps](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-the-number-of-validation-sanity-steps)
|
||||
|
||||
#### Testing loop
|
||||
- [Run test set](https://williamfalcon.github.io/pytorch-lightning/Trainer/Testing%20loop/)
|
||||
|
||||
## Demo
|
||||
```bash
|
||||
# install lightning
|
||||
pip install pytorch-lightning
|
||||
pip install pytorch_lightning
|
||||
|
||||
# clone lightning for the demo
|
||||
git clone https://github.com/williamFalcon/pytorch-lightning.git
|
||||
@@ -354,8 +368,24 @@ python multi_node_cluster_template.py --nb_gpu_nodes 4 --gpus '0,1,2,3,4,5,6,7'
|
||||
- [9 key speed features in Pytorch-Lightning](https://towardsdatascience.com/9-tips-for-training-lightning-fast-neural-networks-in-pytorch-8e63a502f565)
|
||||
- [SLURM, multi-node training with Lightning](https://towardsdatascience.com/trivial-multi-node-training-with-pytorch-lightning-ff75dfb809bd)
|
||||
|
||||
---
|
||||
## Asking for help
|
||||
Welcome to the Lightning community!
|
||||
|
||||
If you have any questions, feel free to:
|
||||
1. [read the docs](https://williamfalcon.github.io/pytorch-lightning/).
|
||||
2. [Search through the issues](https://github.com/williamFalcon/pytorch-lightning/issues?utf8=%E2%9C%93&q=my++question).
|
||||
3. [Ask on stackoverflow](https://stackoverflow.com/questions/ask?guided=false) with the tag pytorch-lightning.
|
||||
|
||||
If no one replies to you quickly enough, feel free to post the stackoverflow link to our Gitter chat!
|
||||
|
||||
To chat with the rest of us visit our [gitter channel](https://gitter.im/PyTorch-Lightning/community)!
|
||||
|
||||
---
|
||||
## FAQ
|
||||
**How do I use Lightning for rapid research?**
|
||||
[Here's a walk-through](https://williamfalcon.github.io/pytorch-lightning/)
|
||||
|
||||
**Why was Lightning created?**
|
||||
Lightning has 3 goals in mind:
|
||||
1. Maximal flexibility while abstracting out the common boilerplate across research projects.
|
||||
@@ -375,11 +405,36 @@ Nope.
|
||||
Nope. Please use anaconda or miniconda.
|
||||
|
||||
**Which PyTorch versions do you support?**
|
||||
Lightning 0.4.2+ supports PyTorch 1.2.0.
|
||||
For PyTorch 1.1.0 install Lightning 0.4.0 with test-tube=0.6.7.6.
|
||||
- **PyTorch 1.1.0**
|
||||
```bash
|
||||
# install pytorch 1.1.0 using the official instructions
|
||||
|
||||
# install test-tube 0.6.7.6 which supports 1.1.0
|
||||
pip install test-tube==0.6.7.6
|
||||
|
||||
# install latest Lightning version without upgrading deps
|
||||
pip install -U --no-deps pytorch-lightning
|
||||
```
|
||||
- **PyTorch 1.2.0**
|
||||
Install via pip as normal
|
||||
|
||||
## Bleeding edge
|
||||
If you can't wait for the next release, install the most up to date code with:
|
||||
## Custom installation
|
||||
|
||||
### Bleeding edge
|
||||
|
||||
If you can't wait for the next release, install the most up to date code with:
|
||||
* using GIT (locally clone whole repo with full history)
|
||||
```bash
|
||||
pip install git+https://github.com/williamFalcon/pytorch-lightning.git@master --upgrade
|
||||
```
|
||||
* using instant zip (last state of the repo without git history)
|
||||
```bash
|
||||
pip install https://github.com/williamFalcon/pytorch-lightning/archive/master.zip --upgrade
|
||||
```
|
||||
|
||||
### Any release installation
|
||||
|
||||
You can also install any past release from this repository:
|
||||
```bash
|
||||
pip install git+https://github.com/williamFalcon/pytorch-lightning.git@master --upgrade
|
||||
pip install https://github.com/williamFalcon/pytorch-lightning/archive/0.4.4.zip --upgrade
|
||||
```
|
||||
|
||||
+1
-3
@@ -45,9 +45,7 @@ install:
|
||||
# directly to master instead of just PR builds (or the converse).
|
||||
- SET PATH=%PYTHON%;%PYTHON%\\Scripts;%path%
|
||||
- pip install -U --user pip
|
||||
- pip install "https://download.pytorch.org/whl/cu90/torch-1.1.0-cp%PIP_PYVER%-cp%PIP_PYVER%m-win_amd%PYTHON_ARCH%.whl"
|
||||
pip install "https://download.pytorch.org/whl/cu90/torchvision-0.3.0-cp%PIP_PYVER%-cp%PIP_PYVER%m-win_amd%PYTHON_ARCH%.whl"
|
||||
- pip install -r requirements.txt
|
||||
- pip install -r requirements.txt -f https://download.pytorch.org/whl/torch_stable.html
|
||||
- pip install -r ./tests/requirements.txt
|
||||
|
||||
# scripts to run before tests (working directory and environment changes are persisted from the previous steps such as "before_build")
|
||||
|
||||
@@ -9,20 +9,22 @@ Otherwise, to Define a Lightning Module, implement the following methods:
|
||||
|
||||
**Required**:
|
||||
|
||||
- [training_step](RequiredTrainerInterface.md#training_step)
|
||||
- [tng_dataloader](RequiredTrainerInterface.md#tng_dataloader)
|
||||
- [configure_optimizers](RequiredTrainerInterface.md#configure_optimizers)
|
||||
- [training_step](RequiredTrainerInterface.md#training_step)
|
||||
- [tng_dataloader](RequiredTrainerInterface.md#tng_dataloader)
|
||||
- [configure_optimizers](RequiredTrainerInterface.md#configure_optimizers)
|
||||
|
||||
**Optional**:
|
||||
- [validation_step](RequiredTrainerInterface.md#validation_step)
|
||||
- [validation_end](RequiredTrainerInterface.md#validation_end)
|
||||
- [val_dataloader](RequiredTrainerInterface.md#val_dataloader)
|
||||
- [test_dataloader](RequiredTrainerInterface.md#test_dataloader)
|
||||
|
||||
- [on_save_checkpoint](RequiredTrainerInterface.md#on_save_checkpoint)
|
||||
- [on_load_checkpoint](RequiredTrainerInterface.md#on_load_checkpoint)
|
||||
- [update_tng_log_metrics](RequiredTrainerInterface.md#update_tng_log_metrics)
|
||||
- [add_model_specific_args](RequiredTrainerInterface.md#add_model_specific_args)
|
||||
- [validation_step](RequiredTrainerInterface.md#validation_step)
|
||||
- [validation_end](RequiredTrainerInterface.md#validation_end)
|
||||
- [test_step](RequiredTrainerInterface.md#test_step)
|
||||
- [test_end](RequiredTrainerInterface.md#test_end)
|
||||
- [val_dataloader](RequiredTrainerInterface.md#val_dataloader)
|
||||
- [test_dataloader](RequiredTrainerInterface.md#test_dataloader)
|
||||
- [on_save_checkpoint](RequiredTrainerInterface.md#on_save_checkpoint)
|
||||
- [on_load_checkpoint](RequiredTrainerInterface.md#on_load_checkpoint)
|
||||
- [update_tng_log_metrics](RequiredTrainerInterface.md#update_tng_log_metrics)
|
||||
- [add_model_specific_args](RequiredTrainerInterface.md#add_model_specific_args)
|
||||
|
||||
---
|
||||
### Minimal example
|
||||
@@ -50,19 +52,30 @@ class CoolModel(pl.LightningModule):
|
||||
# REQUIRED
|
||||
x, y = batch
|
||||
y_hat = self.forward(x)
|
||||
return {'loss': F.cross_entropy(y_hat, y)(y_hat, y)}
|
||||
return {'loss': F.cross_entropy(y_hat, y)}
|
||||
|
||||
def validation_step(self, batch, batch_nb):
|
||||
# OPTIONAL
|
||||
x, y = batch
|
||||
y_hat = self.forward(x)
|
||||
return {'val_loss': F.cross_entropy(y_hat, y)(y_hat, y)}
|
||||
return {'val_loss': F.cross_entropy(y_hat, y)}
|
||||
|
||||
def validation_end(self, outputs):
|
||||
# OPTIONAL
|
||||
avg_loss = torch.stack([x['val_loss'] for x in outputs]).mean()
|
||||
return {'avg_val_loss': avg_loss}
|
||||
|
||||
def test_step(self, batch, batch_nb):
|
||||
# OPTIONAL
|
||||
x, y = batch
|
||||
y_hat = self.forward(x)
|
||||
return {'test_loss': F.cross_entropy(y_hat, y)}
|
||||
|
||||
def test_end(self, outputs):
|
||||
# OPTIONAL
|
||||
avg_loss = torch.stack([x['test_loss'] for x in outputs]).mean()
|
||||
return {'avg_test_loss': avg_loss}
|
||||
|
||||
def configure_optimizers(self):
|
||||
# REQUIRED
|
||||
return [torch.optim.Adam(self.parameters(), lr=0.02)]
|
||||
@@ -80,7 +93,8 @@ class CoolModel(pl.LightningModule):
|
||||
@pl.data_loader
|
||||
def test_dataloader(self):
|
||||
# OPTIONAL
|
||||
return DataLoader(MNIST(os.getcwd(), train=True, download=True, transform=transforms.ToTensor()), batch_size=32)
|
||||
# can also return a list of test dataloaders
|
||||
return DataLoader(MNIST(os.getcwd(), train=False, download=True, transform=transforms.ToTensor()), batch_size=32)
|
||||
```
|
||||
---
|
||||
### How do these methods fit into the broader training?
|
||||
@@ -136,7 +150,17 @@ def training_step(self, data_batch, batch_nb):
|
||||
|
||||
# return a dict
|
||||
return output
|
||||
```
|
||||
```
|
||||
|
||||
If you define multiple optimizers, this step will also be called with an additional ```optimizer_idx``` param.
|
||||
``` {.python}
|
||||
# Multiple optimizers (ie: GANs)
|
||||
def training_step(self, data_batch, batch_nb, optimizer_idx):
|
||||
if optimizer_idx == 0:
|
||||
# do training_step with encoder
|
||||
if optimizer_idx == 1:
|
||||
# do training_step with decoder
|
||||
```
|
||||
|
||||
---
|
||||
### tng_dataloader
|
||||
@@ -175,9 +199,15 @@ def configure_optimizers(self)
|
||||
Set up as many optimizers and (optionally) learning rate schedulers as you need. Normally you'd need one. But in the case of GANs or something more esoteric you might have multiple.
|
||||
Lightning will call .backward() and .step() on each one in every epoch. If you use 16 bit precision it will also handle that.
|
||||
|
||||
**Note:** If you use multiple optimizers, training_step will have an additional ```optimizer_idx``` parameter.
|
||||
|
||||
##### Return
|
||||
List or Tuple - List of optimizers with an optional second list of learning-rate schedulers
|
||||
|
||||
|
||||
##### Return
|
||||
Return any of these 3 options:
|
||||
Single optimizer
|
||||
List or Tuple - List of optimizers
|
||||
Two lists - The first list has multiple optimizers, the second a list of learning-rate schedulers
|
||||
|
||||
**Example**
|
||||
|
||||
@@ -185,29 +215,42 @@ List or Tuple - List of optimizers with an optional second list of learning-rate
|
||||
# most cases
|
||||
def configure_optimizers(self):
|
||||
opt = Adam(self.parameters(), lr=0.01)
|
||||
return [opt]
|
||||
return opt
|
||||
|
||||
# multiple optimizer case (eg: GAN)
|
||||
def configure_optimizers(self):
|
||||
generator_opt = Adam(self.model_gen.parameters(), lr=0.01)
|
||||
disriminator_opt = Adam(self.model_disc.parameters(), lr=0.02)
|
||||
return generator_opt, disriminator_opt
|
||||
|
||||
# gan example, with scheduler for discriminator
|
||||
# example with learning_rate schedulers
|
||||
def configure_optimizers(self):
|
||||
generator_opt = Adam(self.model_gen.parameters(), lr=0.01)
|
||||
disriminator_opt = Adam(self.model_disc.parameters(), lr=0.02)
|
||||
discriminator_sched = CosineAnnealing(discriminator_opt, T_max=10)
|
||||
return [generator_opt, disriminator_opt], [discriminator_sched]
|
||||
```
|
||||
```
|
||||
|
||||
If you need to control how often those optimizers step or override the default .step() schedule, override
|
||||
the [optimizer_step](https://williamfalcon.github.io/pytorch-lightning/Trainer/hooks/#optimizer_step) hook.
|
||||
|
||||
## Optional Methods
|
||||
|
||||
### validation_step
|
||||
|
||||
``` {.python}
|
||||
def validation_step(self, data_batch, batch_nb, dataloader_i)
|
||||
# if you have one val dataloader:
|
||||
def validation_step(self, data_batch, batch_nb)
|
||||
|
||||
# if you have multiple val dataloaders:
|
||||
def validation_step(self, data_batch, batch_nb, dataloader_idx)
|
||||
```
|
||||
**OPTIONAL**
|
||||
If you don't need to validate you don't need to implement this method.
|
||||
If you don't need to validate you don't need to implement this method. In this step you'd normally generate examples or calculate anything of interest such as accuracy.
|
||||
|
||||
In this step you'd normally do the forward pass and calculate the loss for a batch. You can also do fancier things like multiple forward passes, calculate accuracy, or save example outputs (using self.experiment or whatever you want). Really, anything you want.
|
||||
When the validation_step is called, the model has been put in eval mode and PyTorch gradients have been disabled. At the end of validation, model goes back to training mode and gradients are enabled.
|
||||
|
||||
This is most likely the same as your training_step. But unlike training step, the outputs from here will go to validation_end for collation.
|
||||
The dict you return here will be available in the `validation_end` method.
|
||||
|
||||
**Params**
|
||||
|
||||
@@ -221,18 +264,24 @@ This is most likely the same as your training_step. But unlike training step, th
|
||||
|
||||
| Return | description | optional |
|
||||
|---|---|---|
|
||||
| dict | Dict of OrderedDict with metrics to display in progress bar. All keys must be tensors. | Y |
|
||||
| dict | Dict or OrderedDict with metrics to display in progress bar. All keys must be tensors. | Y |
|
||||
|
||||
**Example**
|
||||
|
||||
``` {.python}
|
||||
# CASE 1: A single validation dataset
|
||||
def validation_step(self, data_batch, batch_nb):
|
||||
x, y, z = data_batch
|
||||
x, y = data_batch
|
||||
|
||||
# implement your own
|
||||
out = self.forward(x)
|
||||
loss = self.loss(out, x)
|
||||
loss = self.loss(out, y)
|
||||
|
||||
# log 6 example images
|
||||
# or generated text... or whatever
|
||||
sample_imgs = x[:6]
|
||||
grid = torchvision.utils.make_grid(sample_imgs)
|
||||
self.experiment.add_image('example_images', grid, 0)
|
||||
|
||||
# calculate acc
|
||||
labels_hat = torch.argmax(out, dim=1)
|
||||
@@ -267,7 +316,7 @@ def validation_end(self, outputs)
|
||||
```
|
||||
If you didn't define a validation_step, this won't be called.
|
||||
|
||||
Called at the end of the validation loop with the output of each validation_step. Called once per validation dataset.
|
||||
Called at the end of the validation loop with the outputs of validation_step.
|
||||
|
||||
The outputs here are strictly for the progress bar. If you don't need to display anything, don't return anything.
|
||||
|
||||
@@ -275,7 +324,7 @@ The outputs here are strictly for the progress bar. If you don't need to display
|
||||
|
||||
| Param | description |
|
||||
|---|---|
|
||||
| outputs | List of outputs you defined in validation_step |
|
||||
| outputs | List of outputs you defined in validation_step, or if there are multiple dataloaders, a list containing a list of outputs for each dataloader |
|
||||
|
||||
**Return**
|
||||
|
||||
@@ -285,6 +334,8 @@ The outputs here are strictly for the progress bar. If you don't need to display
|
||||
|
||||
**Example**
|
||||
|
||||
With a single dataloader
|
||||
|
||||
``` {.python}
|
||||
def validation_end(self, outputs):
|
||||
"""
|
||||
@@ -304,6 +355,171 @@ def validation_end(self, outputs):
|
||||
return tqdm_dic
|
||||
```
|
||||
|
||||
With multiple dataloaders, `outputs` will be a list of lists. The outer list contains
|
||||
one entry per dataloader, while the inner list contains the individual outputs of
|
||||
each validation step for that dataloader.
|
||||
|
||||
``` {.python}
|
||||
def validation_end(self, outputs):
|
||||
"""
|
||||
Called at the end of validation to aggregate outputs
|
||||
:param outputs: list of list of individual outputs of each validation step
|
||||
:return:
|
||||
"""
|
||||
val_loss_mean = 0
|
||||
val_acc_mean = 0
|
||||
i = 0
|
||||
for dataloader_outputs in outputs:
|
||||
for output in dataloader_outputs:
|
||||
val_loss_mean += output['val_loss']
|
||||
val_acc_mean += output['val_acc']
|
||||
i += 1
|
||||
|
||||
val_loss_mean /= i
|
||||
val_acc_mean /= i
|
||||
tqdm_dic = {'val_loss': val_loss_mean.item(), 'val_acc': val_acc_mean.item()}
|
||||
return tqdm_dic
|
||||
```
|
||||
|
||||
### test_step
|
||||
|
||||
``` {.python}
|
||||
# if you have one test dataloader:
|
||||
def test_step(self, data_batch, batch_nb)
|
||||
|
||||
# if you have multiple test dataloaders:
|
||||
def test_step(self, data_batch, batch_nb, dataloader_idx)
|
||||
```
|
||||
**OPTIONAL**
|
||||
If you don't need to test you don't need to implement this method. In this step you'd normally generate examples or calculate anything of interest such as accuracy.
|
||||
|
||||
When the validation_step is called, the model has been put in eval mode and PyTorch gradients have been disabled. At the end of validation, model goes back to training mode and gradients are enabled.
|
||||
|
||||
The dict you return here will be available in the `test_end` method.
|
||||
|
||||
This function is used when you execute `trainer.test()`.
|
||||
|
||||
**Params**
|
||||
|
||||
| Param | description |
|
||||
|---|---|
|
||||
| data_batch | The output of your dataloader. A tensor, tuple or list |
|
||||
| batch_nb | Integer displaying which batch this is |
|
||||
| dataloader_i | Integer displaying which dataloader this is (only if multiple test datasets used) |
|
||||
|
||||
**Return**
|
||||
|
||||
| Return | description | optional |
|
||||
|---|---|---|
|
||||
| dict | Dict or OrderedDict with metrics to display in progress bar. All keys must be tensors. | Y |
|
||||
|
||||
**Example**
|
||||
|
||||
``` {.python}
|
||||
# CASE 1: A single test dataset
|
||||
def test_step(self, data_batch, batch_nb):
|
||||
x, y = data_batch
|
||||
|
||||
# implement your own
|
||||
out = self.forward(x)
|
||||
loss = self.loss(out, y)
|
||||
|
||||
# calculate acc
|
||||
labels_hat = torch.argmax(out, dim=1)
|
||||
test_acc = torch.sum(y == labels_hat).item() / (len(y) * 1.0)
|
||||
|
||||
# all optional...
|
||||
# return whatever you need for the collation function test_end
|
||||
output = OrderedDict({
|
||||
'test_loss': loss_test,
|
||||
'test_acc': torch.tensor(test_acc), # everything must be a tensor
|
||||
})
|
||||
|
||||
# return an optional dict
|
||||
return output
|
||||
```
|
||||
|
||||
If you pass in multiple test datasets, test_step will have an additional argument.
|
||||
|
||||
```python
|
||||
# CASE 2: multiple test datasets
|
||||
def test_step(self, data_batch, batch_nb, dataset_idx):
|
||||
# dataset_idx tells you which dataset this is.
|
||||
```
|
||||
|
||||
The ```dataset_idx``` corresponds to the order of datasets returned in ```test_dataloader```.
|
||||
|
||||
---
|
||||
### test_end
|
||||
|
||||
``` {.python}
|
||||
def test_end(self, outputs)
|
||||
```
|
||||
If you didn't define a test_step, this won't be called.
|
||||
|
||||
Called at the end of the test step with the output of each test_step.
|
||||
|
||||
The outputs here are strictly for the progress bar. If you don't need to display anything, don't return anything.
|
||||
|
||||
**Params**
|
||||
|
||||
| Param | description |
|
||||
|---|---|
|
||||
| outputs | List of outputs you defined in test_step, or if there are multiple dataloaders, a list containing a list of outputs for each dataloader |
|
||||
|
||||
**Return**
|
||||
|
||||
| Return | description | optional |
|
||||
|---|---|---|
|
||||
| dict | Dict of OrderedDict with metrics to display in progress bar | Y |
|
||||
|
||||
**Example**
|
||||
|
||||
``` {.python}
|
||||
def test_end(self, outputs):
|
||||
"""
|
||||
Called at the end of test to aggregate outputs
|
||||
:param outputs: list of individual outputs of each test step
|
||||
:return:
|
||||
"""
|
||||
test_loss_mean = 0
|
||||
test_acc_mean = 0
|
||||
for output in outputs:
|
||||
test_loss_mean += output['test_loss']
|
||||
test_acc_mean += output['test_acc']
|
||||
|
||||
test_loss_mean /= len(outputs)
|
||||
test_acc_mean /= len(outputs)
|
||||
tqdm_dic = {'test_loss': test_loss_mean.item(), 'test_acc': test_acc_mean.item()}
|
||||
return tqdm_dic
|
||||
```
|
||||
|
||||
With multiple dataloaders, `outputs` will be a list of lists. The outer list contains
|
||||
one entry per dataloader, while the inner list contains the individual outputs of
|
||||
each validation step for that dataloader.
|
||||
|
||||
``` {.python}
|
||||
def test_end(self, outputs):
|
||||
"""
|
||||
Called at the end of test to aggregate outputs
|
||||
:param outputs: list of individual outputs of each test step
|
||||
:return:
|
||||
"""
|
||||
test_loss_mean = 0
|
||||
test_acc_mean = 0
|
||||
i = 0
|
||||
for dataloader_outputs in outputs:
|
||||
for output in dataloader_outputs:
|
||||
test_loss_mean += output['test_loss']
|
||||
test_acc_mean += output['test_acc']
|
||||
i += 1
|
||||
|
||||
test_loss_mean /= i
|
||||
test_acc_mean /= i
|
||||
tqdm_dic = {'test_loss': test_loss_mean.item(), 'test_acc': test_acc_mean.item()}
|
||||
return tqdm_dic
|
||||
```
|
||||
|
||||
---
|
||||
### on_save_checkpoint
|
||||
|
||||
@@ -351,7 +567,7 @@ def on_load_checkpoint(self, checkpoint):
|
||||
|
||||
``` {.python}
|
||||
@pl.data_loader
|
||||
def tng_dataloader(self)
|
||||
def val_dataloader(self)
|
||||
```
|
||||
**OPTIONAL**
|
||||
If you don't need a validation dataset and a validation_step, you don't need to implement this method.
|
||||
@@ -423,7 +639,7 @@ def test_dataloader(self):
|
||||
def update_tng_log_metrics(self, logs)
|
||||
```
|
||||
Called by lightning right before it logs metrics for this batch.
|
||||
This is a chance to ammend or add to the metrics about to be logged.
|
||||
This is a chance to amend or add to the metrics about to be logged.
|
||||
|
||||
##### Return
|
||||
Dict
|
||||
|
||||
@@ -10,7 +10,7 @@ Current dtype
|
||||
|
||||
---
|
||||
#### experiment
|
||||
An instance of test-tube Experiment which you can use to log anything for tensorboarX.
|
||||
An instance of test-tube Experiment which you can use to log anything for tensorboard (subclass of [PyTorch SummaryWriter](https://pytorch.org/docs/stable/tensorboard.html)).
|
||||
```{.python}
|
||||
self.experiment.add_embedding(...)
|
||||
self.experiment.log({'val_loss': 0.9})
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
i Lightning can automate saving and loading checkpoints.
|
||||
Lightning can automate saving and loading checkpoints.
|
||||
|
||||
---
|
||||
### Model saving
|
||||
@@ -38,6 +38,7 @@ trainer.fit(model)
|
||||
```
|
||||
|
||||
The trainer restores:
|
||||
|
||||
- global_step
|
||||
- current_epoch
|
||||
- All optimizers
|
||||
|
||||
@@ -10,10 +10,13 @@ For multi-node training you must use DistributedDataParallel.
|
||||
|
||||
You can toggle between each mode by setting this flag.
|
||||
``` {.python}
|
||||
# DEFAULT uses DataParallel
|
||||
# DEFAULT (when using single GPU or no GPUs)
|
||||
trainer = Trainer(distributed_backend=None)
|
||||
|
||||
# Change to DataParallel (gpus > 1)
|
||||
trainer = Trainer(distributed_backend='dp')
|
||||
|
||||
# change to distributed data parallel
|
||||
# change to distributed data parallel (gpus > 1)
|
||||
trainer = Trainer(distributed_backend='ddp')
|
||||
```
|
||||
|
||||
@@ -32,12 +35,24 @@ Below are the possible configurations we support.
|
||||
|
||||
| 1 GPU | 1+ GPUs | DP | DDP | 16-bit | command |
|
||||
|---|---|---|---|---|---|
|
||||
| Y | | | | | ```Trainer(gpus=[0])``` |
|
||||
| Y | | | | Y | ```Trainer(gpus=[0], use_amp=True)``` |
|
||||
| | Y | Y | | | ```Trainer(gpus=[0, ...])``` |
|
||||
| | Y | | Y | | ```Trainer(gpus=[0, ...], distributed_backend='ddp')``` |
|
||||
| | Y | | Y | Y | ```Trainer(gpus=[0, ...], distributed_backend='ddp', use_amp=True)``` |
|
||||
| Y | | | | | ```Trainer(gpus=1)``` |
|
||||
| Y | | | | Y | ```Trainer(gpus=1, use_amp=True)``` |
|
||||
| | Y | Y | | | ```Trainer(gpus=k)``` |
|
||||
| | Y | | Y | | ```Trainer(gpus=k, distributed_backend='ddp')``` |
|
||||
| | Y | | Y | Y | ```Trainer(gpus=k, distributed_backend='ddp', use_amp=True)``` |
|
||||
|
||||
You also have the option of specifying which GPUs to use by passing a list:
|
||||
|
||||
```python
|
||||
# DEFAULT (int)
|
||||
Trainer(gpus=k)
|
||||
|
||||
# You specify which GPUs (don't use if running on cluster)
|
||||
Trainer(gpus=[0, 1])
|
||||
|
||||
# can also be a string
|
||||
Trainer(gpus='0, 1')
|
||||
```
|
||||
|
||||
---
|
||||
#### CUDA flags
|
||||
@@ -49,6 +64,9 @@ Lightning sets these for you automatically, there's NO NEED to do this yourself.
|
||||
# os.environ["CUDA_VISIBLE_DEVICES"] = "0"
|
||||
```
|
||||
|
||||
However, when using a cluster, Lightning will NOT set these flags (and you should not either).
|
||||
SLURM will set these for you.
|
||||
|
||||
---
|
||||
#### 16-bit mixed precision
|
||||
16 bit precision can cut your memory footprint by half. If using volta architecture GPUs it can give a dramatic training speed-up as well.
|
||||
@@ -70,7 +88,7 @@ trainer = Trainer(amp_level='O2', use_amp=False)
|
||||
Make sure you're on a GPU machine.
|
||||
```python
|
||||
# DEFAULT
|
||||
trainer = Trainer(gpus=[0])
|
||||
trainer = Trainer(gpus=1)
|
||||
```
|
||||
|
||||
---
|
||||
@@ -78,11 +96,11 @@ trainer = Trainer(gpus=[0])
|
||||
Make sure you're on a GPU machine. You can set as many GPUs as you want.
|
||||
In this setting, the model will run on all 8 GPUs at once using DataParallel under the hood.
|
||||
```python
|
||||
# to use DataParallel (default)
|
||||
trainer = Trainer(gpus=[0,1,2,3,4,5,6,7], distributed_backend='dp')
|
||||
# to use DataParallel
|
||||
trainer = Trainer(gpus=8, distributed_backend='dp')
|
||||
|
||||
# RECOMMENDED use DistributedDataParallel
|
||||
trainer = Trainer(gpus=[0,1,2,3,4,5,6,7], distributed_backend='ddp')
|
||||
trainer = Trainer(gpus=8, distributed_backend='ddp')
|
||||
```
|
||||
|
||||
---
|
||||
@@ -90,7 +108,7 @@ trainer = Trainer(gpus=[0,1,2,3,4,5,6,7], distributed_backend='ddp')
|
||||
Multi-node training is easily done by specifying these flags.
|
||||
```python
|
||||
# train on 12*8 GPUs
|
||||
trainer = Trainer(gpus=[0,1,2,3,4,5,6,7], nb_gpu_nodes=12)
|
||||
trainer = Trainer(gpus=8, nb_gpu_nodes=12)
|
||||
```
|
||||
|
||||
In addition, make sure to set up your SLURM job correctly via the [SlurmClusterObject](https://williamfalcon.github.io/test-tube/hpc/SlurmCluster/). In particular, specify the number of tasks per node correctly.
|
||||
|
||||
@@ -5,7 +5,7 @@ Lighting offers a few options for logging information about model, gpu usage, et
|
||||
#### Display metrics in progress bar
|
||||
``` {.python}
|
||||
# DEFAULT
|
||||
trainer = Trainer(progress_bar=True)
|
||||
trainer = Trainer(show_progress_bar=True)
|
||||
```
|
||||
|
||||
---
|
||||
@@ -14,6 +14,14 @@ Every k batches lightning will make an entry in the metrics log
|
||||
``` {.python}
|
||||
# DEFAULT (ie: save a .csv log file every 10 batches)
|
||||
trainer = Trainer(add_log_row_interval=10)
|
||||
```
|
||||
|
||||
---
|
||||
#### Log metric row every k batches
|
||||
Logs GPU memory when metrics are logged.
|
||||
``` {.python}
|
||||
# DEFAULT
|
||||
trainer = Trainer(log_gpu_memory=False)
|
||||
```
|
||||
|
||||
---
|
||||
|
||||
@@ -1,8 +1,10 @@
|
||||
Lightning supports model training on a cluster managed by SLURM in the following cases:
|
||||
|
||||
1. Training on single or multi-cpus only.
|
||||
2. Training on single or multi-gpus on the same node.
|
||||
3. Coming SOON: Training across multiple nodes.
|
||||
1. Training on a single cpu or single GPU.
|
||||
2. Train on multiple GPUs on the same node using DataParallel or DistributedDataParallel
|
||||
3. Training across multiple GPUs on multiple different nodes via DistributedDataParallel.
|
||||
|
||||
**Note: A node means a machine with multiple GPUs**
|
||||
|
||||
---
|
||||
#### Running grid search on a cluster
|
||||
@@ -55,8 +57,8 @@ cluster.memory_mb_per_node = 10000
|
||||
cluster.job_time = '10:00'
|
||||
```
|
||||
|
||||
(3). Give trainer the cluster_manager in your main function:
|
||||
|
||||
(3). Make a main function with your model and trainer. Each job will call this function with a particular
|
||||
hparams configuration.
|
||||
```{.python}
|
||||
from pytorch_lightning import Trainer
|
||||
|
||||
@@ -66,12 +68,12 @@ def train_fx(trial_hparams, cluster_manager, _):
|
||||
my_model = MyLightningModel()
|
||||
|
||||
# give the trainer the cluster object
|
||||
trainer = Trainer(cluster=cluster_manager)
|
||||
trainer = Trainer()
|
||||
trainer.fit(my_model)
|
||||
|
||||
```
|
||||
|
||||
(4). Start the grid search
|
||||
(3). Start the grid/random search
|
||||
```{.python}
|
||||
# run the models on the cluster
|
||||
cluster.optimize_parallel_cluster_gpu(
|
||||
@@ -81,24 +83,22 @@ cluster.optimize_parallel_cluster_gpu(
|
||||
job_display_name='my_exp')
|
||||
```
|
||||
|
||||
That's it! The SlurmCluster object will automatically checkpoint the lightning model and resubmit if it runs into the walltime!
|
||||
|
||||
|
||||
---
|
||||
#### Walltime auto-resubmit
|
||||
Lightning automatically resubmits jobs when they reach the walltime. You get this behavior for free if you give lightning
|
||||
a slurm cluster object.
|
||||
Lightning automatically resubmits jobs when they reach the walltime. Make sure to set the SIGUSR1 signal in
|
||||
your SLURM script.
|
||||
|
||||
```{.python}
|
||||
def my_main_fx(hparams, slurm_manager, _):
|
||||
trainer = Trainer(cluster=slurm_manager)
|
||||
```bash
|
||||
# 90 seconds before training ends
|
||||
#SBATCH --signal=SIGUSR1@90
|
||||
```
|
||||
|
||||
(See the grid search example above for cluster configuration).
|
||||
With this feature lightning will:
|
||||
When lightning receives the SIGUSR1 signal it will:
|
||||
1. save a checkpoint with 'hpc_ckpt' in the name.
|
||||
2. resubmit the job using the SLURM_JOB_ID
|
||||
|
||||
When the script starts again, Lightning will:
|
||||
1. search for a 'hpc_ckpt' checkpoint.
|
||||
2. restore the model, optimizers, schedulers, epoch, etc...
|
||||
|
||||
1. automatically checkpoint the model
|
||||
2. checkpoint the trainer session
|
||||
3. resubmit a continuation job.
|
||||
4. load the checkpoint and trainer session in the new model
|
||||
|
||||
|
||||
@@ -0,0 +1,31 @@
|
||||
To ensure you don't accidentally use test data to guide training decisions Lightning makes running the test set deliberate.
|
||||
|
||||
---
|
||||
#### test
|
||||
You have two options to run the test set.
|
||||
First case is where you test right after a full training routine.
|
||||
``` {.python}
|
||||
# run full training
|
||||
trainer.fit(model)
|
||||
|
||||
# run test set
|
||||
trainer.test()
|
||||
```
|
||||
|
||||
Second case is where you load a model and run the test set
|
||||
```{.python}
|
||||
model = MyLightningModule.load_from_metrics(
|
||||
weights_path='/path/to/pytorch_checkpoint.ckpt',
|
||||
tags_csv='/path/to/test_tube/experiment/version/meta_tags.csv',
|
||||
on_gpu=True,
|
||||
map_location=None
|
||||
)
|
||||
|
||||
# init trainer with whatever options
|
||||
trainer = Trainer(...)
|
||||
|
||||
# test (pass in the model)
|
||||
trainer.test(model)
|
||||
```
|
||||
In this second case, the options you pass to trainer will be used when running the test set (ie: 16-bit, dp, ddp, etc...)
|
||||
|
||||
@@ -54,7 +54,10 @@ trainer = Trainer(track_grad_norm=2)
|
||||
|
||||
---
|
||||
#### Set how much of the training set to check
|
||||
If you don't want to check 100% of the training set (for debugging or if it's huge), set this flag
|
||||
If you don't want to check 100% of the training set (for debugging or if it's huge), set this flag.
|
||||
|
||||
train_percent_check will be overwritten by overfit_pct if `overfit_pct > 0`
|
||||
|
||||
``` {.python}
|
||||
# DEFAULT
|
||||
trainer = Trainer(train_percent_check=1.0)
|
||||
|
||||
@@ -5,8 +5,6 @@ Below are all the things lightning automates for you in the validation loop.
|
||||
Lightning will run 5 steps of validation in the beginning of training as a sanity check so you don't have to wait until a full epoch to catch possible validation issues.
|
||||
|
||||
|
||||
|
||||
|
||||
---
|
||||
#### Check validation every n epochs
|
||||
If you have a small dataset you might want to check validation every n epochs
|
||||
@@ -18,6 +16,9 @@ trainer = Trainer(check_val_every_n_epoch=1)
|
||||
---
|
||||
#### Set how much of the validation set to check
|
||||
If you don't want to check 100% of the validation set (for debugging or if it's huge), set this flag
|
||||
|
||||
val_percent_check will be overwritten by overfit_pct if `overfit_pct > 0`
|
||||
|
||||
``` {.python}
|
||||
# DEFAULT
|
||||
trainer = Trainer(val_percent_check=1.0)
|
||||
@@ -29,6 +30,9 @@ trainer = Trainer(val_percent_check=0.1)
|
||||
---
|
||||
#### Set how much of the test set to check
|
||||
If you don't want to check 100% of the test set (for debugging or if it's huge), set this flag
|
||||
|
||||
test_percent_check will be overwritten by overfit_pct if `overfit_pct > 0`
|
||||
|
||||
``` {.python}
|
||||
# DEFAULT
|
||||
trainer = Trainer(test_percent_check=1.0)
|
||||
@@ -54,4 +58,6 @@ Lightning runs a few steps of validation in the beginning of training. This avoi
|
||||
``` {.python}
|
||||
# DEFAULT
|
||||
trainer = Trainer(nb_sanity_val_steps=5)
|
||||
```
|
||||
```
|
||||
|
||||
You can use `Trainer(nb_sanity_val_steps=0)` to skip the sanity check.
|
||||
|
||||
@@ -23,6 +23,9 @@ trainer = Trainer(track_grad_norm=2)
|
||||
---
|
||||
#### Make model overfit on subset of data
|
||||
A useful debugging trick is to make your model overfit a tiny fraction of the data.
|
||||
|
||||
setting `overfit_pct > 0` will overwrite train_percent_check, val_percent_check, test_percent_check
|
||||
|
||||
``` {.python}
|
||||
# DEFAULT don't overfit (ie: normal training)
|
||||
trainer = Trainer(overfit_pct=0.0)
|
||||
|
||||
@@ -92,8 +92,28 @@ def optimizer_step(self, current_epoch, batch_nb, optimizer, optimizer_i):
|
||||
if batch_nb % 4 == 0 :
|
||||
optimizer.step()
|
||||
optimizer.zero_grad()
|
||||
|
||||
# ...
|
||||
# add as many optimizers as you want
|
||||
```
|
||||
|
||||
This step allows you to do a lot of non-standard training tricks such as learning-rate warm-up:
|
||||
|
||||
```python
|
||||
# learning rate warm-up
|
||||
def optimizer_step(self, current_epoch, batch_nb, optimizer, optimizer_i):
|
||||
# warm up lr
|
||||
if self.trainer.global_step < 500:
|
||||
lr_scale = min(1., float(self.trainer.global_step + 1) / 500.)
|
||||
for pg in optimizer.param_groups:
|
||||
pg['lr'] = lr_scale * self.hparams.learning_rate
|
||||
|
||||
# update params
|
||||
optimizer.step()
|
||||
optimizer.zero_grad()
|
||||
```
|
||||
|
||||
|
||||
---
|
||||
#### on_before_zero_grad
|
||||
Called in the training loop after taking an optimizer step and before zeroing grads.
|
||||
|
||||
@@ -68,6 +68,7 @@ But of course the fun is in all the advanced things it can do:
|
||||
- [Learning rate scheduling](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#configure_optimizers)
|
||||
- [Use multiple optimizers (like GANs)](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#configure_optimizers)
|
||||
- [Set how much of the training set to check (1-100%)](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#set-how-much-of-the-training-set-to-check)
|
||||
- [Step optimizers at arbitrary intervals](https://williamfalcon.github.io/pytorch-lightning/Trainer/hooks/#optimizer_step)
|
||||
|
||||
**Validation loop**
|
||||
|
||||
@@ -77,3 +78,8 @@ But of course the fun is in all the advanced things it can do:
|
||||
- [Set how much of the test set to check](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-how-much-of-the-test-set-to-check)
|
||||
- [Set validation check frequency within 1 training epoch](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-validation-check-frequency-within-1-training-epoch)
|
||||
- [Set the number of validation sanity steps](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-the-number-of-validation-sanity-steps)
|
||||
|
||||
|
||||
**Testing loop**
|
||||
|
||||
- [Run test set](https://williamfalcon.github.io/pytorch-lightning/Trainer/Testing%20loop/)
|
||||
@@ -40,7 +40,7 @@ The main function should have 3 arguments:
|
||||
- slurm_manager: Slurm cluster manager object (can be None)
|
||||
- dict: for you to return any values you want (useful in meta-learning, otherwise set to _)
|
||||
|
||||
```{}
|
||||
```python
|
||||
def main(hparams, cluster, results_dict):
|
||||
"""
|
||||
Main training routine specific for this project
|
||||
|
||||
+59
-5
@@ -1,12 +1,63 @@
|
||||
###### New project Quick Start
|
||||
To start a new project you define two files, a LightningModule and a Trainer file.
|
||||
To start a new project define two files, a LightningModule and a Trainer file.
|
||||
To illustrate Lightning power and simplicity, here's an example of a typical research flow.
|
||||
|
||||
A separate trainer file allows to run many LightningModules. Each LightningModule has the core
|
||||
logic to a particular research project.
|
||||
###### Case 1: BERT
|
||||
Let's say you're working on something like BERT but want to try different ways of training or even different networks.
|
||||
You would define a single LightningModule and use flags to switch between your different ideas.
|
||||
```python
|
||||
class BERT(pl.LightningModule):
|
||||
def __init__(self, model_name, task):
|
||||
self.task = task
|
||||
|
||||
if model_name == 'transformer':
|
||||
self.net = Transformer()
|
||||
elif model_name == 'my_cool_version':
|
||||
self.net = MyCoolVersion()
|
||||
|
||||
def training_step(self, batch, batch_nb):
|
||||
if self.task == 'standard_bert':
|
||||
# do standard bert training with self.net...
|
||||
# return loss
|
||||
|
||||
if self.task == 'my_cool_task':
|
||||
# do my own version with self.net
|
||||
# return loss
|
||||
```
|
||||
|
||||
For example, one lightningModule could be an image classifier, the other
|
||||
one could be a seq-2-seq model, both (optionally) ran by the same trainer file.
|
||||
###### Case 2: COOLER NOT BERT
|
||||
But if you wanted to try something **completely** different, you'd define a new module for that.
|
||||
```python
|
||||
|
||||
class CoolerNotBERT(pl.LightningModule):
|
||||
def __init__(self):
|
||||
self.net = ...
|
||||
|
||||
def training_step(self, batch, batch_nb):
|
||||
# do some other cool task
|
||||
# return loss
|
||||
```
|
||||
|
||||
###### Rapid research flow
|
||||
Then you could do rapid research by switching between these two and using the same trainer.
|
||||
```python
|
||||
|
||||
if use_bert:
|
||||
model = BERT()
|
||||
else:
|
||||
model = CoolerNotBERT()
|
||||
|
||||
trainer = Trainer(gpus=[0, 1, 2, 3], use_amp=True)
|
||||
trainer.fit(model)
|
||||
```
|
||||
|
||||
Notice a few things about this flow:
|
||||
1. You're writing pure PyTorch... no unnecessary abstractions or new libraries to learn.
|
||||
2. You get free GPU and 16-bit support without writing any of that code in your model.
|
||||
3. You also get all of the capabilities below (without coding or testing yourself).
|
||||
|
||||
---
|
||||
###### Templates
|
||||
1. [MNIST LightningModule](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#minimal-example)
|
||||
2. [Trainer](https://williamfalcon.github.io/pytorch-lightning/Trainer/)
|
||||
- [Basic CPU Trainer Template](https://github.com/williamFalcon/pytorch-lightning/blob/master/examples/new_project_templates/single_cpu_template.py)
|
||||
@@ -75,6 +126,7 @@ one could be a seq-2-seq model, both (optionally) ran by the same trainer file.
|
||||
- [Learning rate scheduling](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#configure_optimizers)
|
||||
- [Use multiple optimizers (like GANs)](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#configure_optimizers)
|
||||
- [Set how much of the training set to check (1-100%)](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#set-how-much-of-the-training-set-to-check)
|
||||
- [Step optimizers at arbitrary intervals](https://williamfalcon.github.io/pytorch-lightning/Trainer/hooks/#optimizer_step)
|
||||
|
||||
###### Validation loop
|
||||
|
||||
@@ -85,3 +137,5 @@ one could be a seq-2-seq model, both (optionally) ran by the same trainer file.
|
||||
- [Set validation check frequency within 1 training epoch](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-validation-check-frequency-within-1-training-epoch)
|
||||
- [Set the number of validation sanity steps](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-the-number-of-validation-sanity-steps)
|
||||
|
||||
###### Testing loop
|
||||
- [Run test set](https://williamfalcon.github.io/pytorch-lightning/Trainer/Testing%20loop/)
|
||||
|
||||
@@ -161,9 +161,9 @@ class LightningTemplateModel(LightningModule):
|
||||
# reduce manually when using dp
|
||||
val_acc = output['val_acc']
|
||||
if self.trainer.use_dp:
|
||||
val_acc_mean = torch.mean(val_acc)
|
||||
val_acc = torch.mean(val_acc)
|
||||
|
||||
val_acc_mean += val_acc_mean
|
||||
val_acc_mean += val_acc
|
||||
|
||||
val_loss_mean /= len(outputs)
|
||||
val_acc_mean /= len(outputs)
|
||||
@@ -189,16 +189,13 @@ class LightningTemplateModel(LightningModule):
|
||||
dataset = MNIST(root=self.hparams.data_root, train=train,
|
||||
transform=transform, download=True)
|
||||
|
||||
# when using multi-node we need to add the datasampler
|
||||
# when using multi-node (ddp) we need to add the datasampler
|
||||
train_sampler = None
|
||||
batch_size = self.hparams.batch_size
|
||||
|
||||
try:
|
||||
if self.on_gpu:
|
||||
train_sampler = DistributedSampler(dataset, rank=self.trainer.proc_rank)
|
||||
batch_size = batch_size // self.trainer.world_size # scale batch size
|
||||
except Exception:
|
||||
pass
|
||||
if self.use_ddp:
|
||||
train_sampler = DistributedSampler(dataset, rank=self.trainer.proc_rank)
|
||||
batch_size = batch_size // self.trainer.world_size # scale batch size
|
||||
|
||||
should_shuffle = train_sampler is None
|
||||
loader = DataLoader(
|
||||
@@ -243,15 +240,15 @@ class LightningTemplateModel(LightningModule):
|
||||
parser.add_argument('--out_features', default=10, type=int)
|
||||
# use 500 for CPU, 50000 for GPU to see speed difference
|
||||
parser.add_argument('--hidden_dim', default=50000, type=int)
|
||||
parser.opt_list('--drop_prob', default=0.2, options=[0.2, 0.5], type=float, tunable=False)
|
||||
parser.opt_list('--drop_prob', default=0.2, options=[0.2, 0.5], type=float, tunable=True)
|
||||
parser.opt_list('--learning_rate', default=0.001 * 8, type=float,
|
||||
options=[0.0001, 0.0005, 0.001],
|
||||
tunable=True)
|
||||
|
||||
# data
|
||||
parser.add_argument('--data_root', default=os.path.join(root_dir, 'mnist'), type=str)
|
||||
|
||||
# training params (opt)
|
||||
parser.opt_list('--learning_rate', default=0.001 * 8, type=float,
|
||||
options=[0.0001, 0.0005, 0.001, 0.005],
|
||||
tunable=False)
|
||||
parser.opt_list('--optimizer_name', default='adam', type=str,
|
||||
options=['adam'], tunable=False)
|
||||
|
||||
|
||||
@@ -0,0 +1,107 @@
|
||||
# Multi-node examples
|
||||
Use these templates for multi-node training.
|
||||
The main complexity around cluster training is how you submit the SLURM jobs.
|
||||
|
||||
## Test-tube
|
||||
Lightning uses test-tube to submit SLURM jobs and to run hyperparameter searches on a cluster.
|
||||
|
||||
To run a hyperparameter search, we normally add the values to search to the Hyperparameter optimizer
|
||||
```python
|
||||
from test_tube import HyperOptArgumentParser
|
||||
|
||||
parser = HyperOptArgumentParser(strategy='grid_search')
|
||||
parser.opt_list('--drop_prob', default=0.2, options=[0.2, 0.5], type=float, tunable=True)
|
||||
parser.opt_list('--learning_rate', default=0.001, type=float,
|
||||
options=[0.0001, 0.0005, 0.001],
|
||||
tunable=True)
|
||||
|
||||
# give your model a chance to add its own parameters
|
||||
parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir)
|
||||
|
||||
# parse args
|
||||
hyperparams = parser.parse_args()
|
||||
```
|
||||
|
||||
The above sets up a grid search on learning rate and drop probability. You can now add this object to the
|
||||
cluster object to perform the grid search:
|
||||
```python
|
||||
cluster = SlurmCluster(
|
||||
hyperparam_optimizer=hyperparams,
|
||||
log_path='/path/to/log/slurm/files',
|
||||
)
|
||||
|
||||
# ... configure cluster options
|
||||
|
||||
# run grid search on cluster
|
||||
nb_trials = 6 # (2 drop probs * 3 lrs)
|
||||
cluster.optimize_parallel_cluster_gpu(
|
||||
YourMainFunction,
|
||||
nb_trials=nb_trials,
|
||||
job_name=hyperparams.experiment_name
|
||||
)
|
||||
```
|
||||
|
||||
Running the above will launch 6 jobs, each with a different drop prob and learning rate combination.
|
||||
The ```tunable``` parameter must be set to True to add that argument to the space of options, otherwise
|
||||
Test-Tube will use the ```default=value```.
|
||||
|
||||
|
||||
## SLURM Flags
|
||||
However you decide to submit your jobs, debugging requires a few flags. Without these flags, you'll
|
||||
see a nccl error instead of the actual error which caused the bug.
|
||||
|
||||
```sh
|
||||
export NCCL_DEBUG=INFO
|
||||
export PYTHONFAULTHANDLER=1
|
||||
```
|
||||
|
||||
On some clusters you might need to set the network interface with this flag.
|
||||
```sh
|
||||
export NCCL_SOCKET_IFNAME=^docker0,lo
|
||||
```
|
||||
|
||||
You might also need to load the latest version of NCCL
|
||||
```sh
|
||||
module load NCCL/2.4.7-1-cuda.10.0
|
||||
```
|
||||
|
||||
Finally, you must set the master port (usually a random number between 12k and 20k).
|
||||
```sh
|
||||
# random port between 12k and 20k
|
||||
export MASTER_PORT=$((12000 + RANDOM % 20000))$
|
||||
```
|
||||
|
||||
## Simplest example.
|
||||
1. Modify this script with your CoolModel file.
|
||||
2. Update and submit [this bash script](https://github.com/williamFalcon/pytorch-lightning/blob/master/examples/new_project_templates/multi_node_examples/minimal_multi_node_demo_script.sh)
|
||||
```bash
|
||||
squeue minimal_multi_node_demo_script.sh
|
||||
```
|
||||
|
||||
## Grid search on a cluster
|
||||
|
||||
#### Option 1: Run on cluster using your own SLURM script
|
||||
The trainer and model will work on a cluster if you configure your SLURM script correctly.
|
||||
|
||||
1. Update [this demo slurm script](https://github.com/williamFalcon/pytorch-lightning/blob/master/examples/new_project_templates/multi_node_examples/demo_script.sh).
|
||||
2. Submit the script
|
||||
```bash
|
||||
$ squeue demo_script.sh
|
||||
```
|
||||
|
||||
Most people have some way they automatically generate their own scripts.
|
||||
To run a grid search this way, you'd need a way to automatically generate scripts using all the combinations of
|
||||
hyperparameters to search over.
|
||||
|
||||
#### Option 2: Use test-tube for SLURM script
|
||||
With test tube we can automatically generate slurm scripts for different hyperparameter options.
|
||||
|
||||
To run this demo:
|
||||
```bash
|
||||
source activate YourCondaEnv
|
||||
|
||||
python multi_node_cluster_auto_slurm.py --email your@email.com --gpu_partition your_partition --conda_env YourCondaEnv
|
||||
```
|
||||
|
||||
That will submit 6 jobs. Each job will have a specific combination of hyperparams. Each job will also run on 2 nodes
|
||||
where each node has 8 gpus.
|
||||
@@ -0,0 +1,66 @@
|
||||
#!/bin/bash
|
||||
#
|
||||
# Auto-generated by test-tube (https://github.com/williamFalcon/test-tube)
|
||||
#################
|
||||
|
||||
# set a job name
|
||||
#SBATCH --job-name=lightning_test
|
||||
#################
|
||||
|
||||
# a file for job output, you can check job progress
|
||||
#SBATCH --output=/slurm_output_%j.out
|
||||
#################
|
||||
|
||||
# a file for errors
|
||||
#SBATCH --error=/slurm_output_%j.err
|
||||
#################
|
||||
|
||||
# time needed for job
|
||||
#SBATCH --time=01:00:00
|
||||
#################
|
||||
|
||||
# gpus per node
|
||||
#SBATCH --gres=gpu:8
|
||||
#################
|
||||
|
||||
# cpus per job
|
||||
#SBATCH --cpus-per-task=10
|
||||
#################
|
||||
|
||||
# number of requested nodes
|
||||
#SBATCH --nodes=2
|
||||
#################
|
||||
|
||||
# memory per node (0 means all)
|
||||
#SBATCH --mem=0
|
||||
#################
|
||||
|
||||
# slurm will send a signal this far out before it kills the job
|
||||
#SBATCH --signal=USR1@300
|
||||
#################
|
||||
|
||||
# comment
|
||||
#SBATCH --comment=lightning_demo
|
||||
#################
|
||||
|
||||
# 1 task per gpu
|
||||
#SBATCH --ntasks-per-node=8
|
||||
#################
|
||||
|
||||
source activate YourEnv
|
||||
|
||||
# debugging flags (optional)
|
||||
export NCCL_DEBUG=INFO
|
||||
export PYTHONFAULTHANDLER=1
|
||||
|
||||
# on your cluster you might need these:
|
||||
# set the network interface
|
||||
export NCCL_SOCKET_IFNAME=^docker0,lo
|
||||
|
||||
# might need the latest cuda
|
||||
module load NCCL/2.4.7-1-cuda.10.0
|
||||
|
||||
# random port between 12k and 20k
|
||||
export MASTER_PORT=$((12000 + RANDOM % 20000))$
|
||||
|
||||
srun python multi_node_own_slurm_script.py
|
||||
@@ -0,0 +1,24 @@
|
||||
from pytorch_lightning import Trainer
|
||||
from test_tube import Experiment
|
||||
import os
|
||||
|
||||
|
||||
def main():
|
||||
# use the cool model from the main README.md
|
||||
model = CoolModel() # noqa: F821
|
||||
exp = Experiment(save_dir=os.getcwd())
|
||||
|
||||
# train on 4 GPUs across 4 nodes
|
||||
trainer = Trainer(
|
||||
experiment=exp,
|
||||
distributed_backend='ddp',
|
||||
max_nb_epochs=10,
|
||||
gpus=4,
|
||||
nb_gpu_nodes=4
|
||||
)
|
||||
|
||||
trainer.fit(model)
|
||||
|
||||
|
||||
if __name__ == '__main__':
|
||||
main()
|
||||
+30
@@ -0,0 +1,30 @@
|
||||
#!/bin/bash -l
|
||||
|
||||
# SLURM SUBMIT SCRIPT
|
||||
#SBATCH --nodes=4
|
||||
#SBATCH --gres=gpu:4
|
||||
#SBATCH --ntasks-per-node=4
|
||||
#SBATCH --mem=0
|
||||
#SBATCH --time=0-02:00:00
|
||||
|
||||
# activate conda env
|
||||
conda activate my_env
|
||||
|
||||
# -------------------------
|
||||
# debugging flags (optional)
|
||||
# export NCCL_DEBUG=INFO
|
||||
# export PYTHONFAULTHANDLER=1
|
||||
|
||||
# on your cluster you might need these:
|
||||
# set the network interface
|
||||
# export NCCL_SOCKET_IFNAME=^docker0,lo
|
||||
|
||||
# might need the latest cuda
|
||||
# module load NCCL/2.4.7-1-cuda.10.0
|
||||
# -------------------------
|
||||
|
||||
# random port between 12k and 20k
|
||||
export MASTER_PORT=$((12000 + RANDOM % 20000))
|
||||
|
||||
# run script from above
|
||||
python minimal_multi_node_demo.py
|
||||
+34
-15
@@ -7,11 +7,12 @@ from time import sleep
|
||||
import torch
|
||||
|
||||
from test_tube import HyperOptArgumentParser, Experiment, SlurmCluster
|
||||
from pytorch_lightning.models.trainer import Trainer
|
||||
from pytorch_lightning import Trainer
|
||||
from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint
|
||||
|
||||
from examples.new_project_templates.lightning_module_template import LightningTemplateModel
|
||||
|
||||
PORT = np.random.randint(12000, 20000, 1)[0]
|
||||
SEED = 2334
|
||||
torch.manual_seed(SEED)
|
||||
np.random.seed(SEED)
|
||||
@@ -21,7 +22,7 @@ def main_local(hparams):
|
||||
main(hparams, None, None)
|
||||
|
||||
|
||||
def main(hparams, cluster, results_dict):
|
||||
def main(hparams, cluster):
|
||||
"""
|
||||
Main training routine specific for this project
|
||||
:param hparams:
|
||||
@@ -47,6 +48,7 @@ def main(hparams, cluster, results_dict):
|
||||
name=hyperparams.experiment_name,
|
||||
save_dir=hyperparams.test_tube_save_path,
|
||||
autosave=False,
|
||||
version=hparams.hpc_exp_number, # match the slurm job version number
|
||||
description='test demo'
|
||||
)
|
||||
|
||||
@@ -77,10 +79,9 @@ def main(hparams, cluster, results_dict):
|
||||
# ------------------------
|
||||
trainer = Trainer(
|
||||
experiment=exp,
|
||||
cluster=cluster,
|
||||
checkpoint_callback=checkpoint,
|
||||
early_stop_callback=early_stop,
|
||||
gpus=hparams.gpus,
|
||||
gpus=hparams.per_experiment_nb_gpus,
|
||||
nb_gpu_nodes=hyperparams.nb_gpu_nodes
|
||||
)
|
||||
|
||||
@@ -99,7 +100,7 @@ def optimize_on_cluster(hyperparams):
|
||||
)
|
||||
|
||||
# email for cluster coms
|
||||
cluster.notify_job_status(email='add_email_here', on_done=True, on_fail=True)
|
||||
cluster.notify_job_status(email=hyperparams.email, on_done=True, on_fail=True)
|
||||
|
||||
# configure cluster
|
||||
cluster.per_experiment_nb_gpus = hyperparams.per_experiment_nb_gpus
|
||||
@@ -109,7 +110,24 @@ def optimize_on_cluster(hyperparams):
|
||||
cluster.memory_mb_per_node = 0
|
||||
|
||||
# any modules for code to run in env
|
||||
cluster.add_command('source activate lightning')
|
||||
cluster.add_command(f'source activate {hyperparams.conda_env}')
|
||||
|
||||
# set DDP master port
|
||||
cluster.add_command(f'export MASTER_PORT={PORT}')
|
||||
|
||||
# OPTIONAL for debugging
|
||||
# without these flags errors in your code will
|
||||
# appear to be nccl errors
|
||||
cluster.add_command('export NCCL_DEBUG=INFO')
|
||||
cluster.add_command('export PYTHONFAULTHANDLER=1')
|
||||
|
||||
# depending on your cluster config, you probably want
|
||||
# to limit the wired connection device
|
||||
# cluster.add_command('export NCCL_SOCKET_IFNAME=^docker0,lo')
|
||||
|
||||
# depending on your cluster, you might need to load
|
||||
# the latest NCCL version
|
||||
# cluster.load_modules(['NCCL/2.4.7-1-cuda.10.0'])
|
||||
|
||||
# run only on 32GB voltas
|
||||
cluster.add_slurm_cmd(cmd='constraint', value='volta32gb',
|
||||
@@ -121,7 +139,7 @@ def optimize_on_cluster(hyperparams):
|
||||
# creates and submits jobs to slurm
|
||||
cluster.optimize_parallel_cluster_gpu(
|
||||
main,
|
||||
nb_trials=hyperparams.nb_hopt_trials,
|
||||
nb_trials=hyperparams.num_hyperparam_trials,
|
||||
job_name=hyperparams.experiment_name
|
||||
)
|
||||
|
||||
@@ -139,15 +157,10 @@ if __name__ == '__main__':
|
||||
parent_parser = HyperOptArgumentParser(strategy='grid_search', add_help=False)
|
||||
|
||||
# cluster args not defined inside the model
|
||||
parent_parser.add_argument('--gpu_partition', type=str, help='consult your cluster manual')
|
||||
|
||||
# TODO: make 1 param
|
||||
parent_parser.add_argument('--per_experiment_nb_gpus', type=int,
|
||||
help='how many gpus to use in a node')
|
||||
parent_parser.add_argument('--gpus', type=str, default='-1',
|
||||
help='how many gpus to use in the node')
|
||||
|
||||
parent_parser.add_argument('--nb_gpu_nodes', type=int, default=1,
|
||||
default=8, help='how many gpus to use in a node')
|
||||
parent_parser.add_argument('--nb_gpu_nodes', type=int, default=2,
|
||||
help='how many nodes to use in a cluster')
|
||||
parent_parser.add_argument('--test_tube_save_path', type=str, default=test_tube_dir,
|
||||
help='where to save logs')
|
||||
@@ -157,9 +170,15 @@ if __name__ == '__main__':
|
||||
help='where to save model')
|
||||
parent_parser.add_argument('--experiment_name', type=str, default='pt_lightning_exp_a',
|
||||
help='test tube exp name')
|
||||
parent_parser.add_argument('--nb_hopt_trials', type=int, default=1,
|
||||
parent_parser.add_argument('--num_hyperparam_trials', type=int, default=6,
|
||||
help='how many grid search trials to run')
|
||||
|
||||
parent_parser.add_argument('--email', type=str, default='add@email.com',
|
||||
help='email for jobs')
|
||||
parent_parser.add_argument('--conda_env', type=str, default='base',
|
||||
help='email for jobs')
|
||||
parent_parser.add_argument('--gpu_partition', type=str, help='consult your cluster manual')
|
||||
|
||||
# allow model to overwrite or extend args
|
||||
parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir)
|
||||
hyperparams = parser.parse_args()
|
||||
@@ -0,0 +1,70 @@
|
||||
"""
|
||||
Multi-node example (GPU)
|
||||
"""
|
||||
import os
|
||||
import numpy as np
|
||||
import torch
|
||||
|
||||
from test_tube import HyperOptArgumentParser, Experiment
|
||||
from pytorch_lightning import Trainer
|
||||
from examples.new_project_templates.lightning_module_template import LightningTemplateModel
|
||||
|
||||
SEED = 2334
|
||||
torch.manual_seed(SEED)
|
||||
np.random.seed(SEED)
|
||||
|
||||
|
||||
def main(hparams):
|
||||
"""
|
||||
Main training routine specific for this project
|
||||
:param hparams:
|
||||
:return:
|
||||
"""
|
||||
# ------------------------
|
||||
# 1 INIT LIGHTNING MODEL
|
||||
# ------------------------
|
||||
model = LightningTemplateModel(hparams)
|
||||
|
||||
# ------------------------
|
||||
# 2 INIT TEST TUBE EXP
|
||||
# ------------------------
|
||||
# init experiment
|
||||
exp = Experiment(
|
||||
name='test_exp',
|
||||
save_dir=hyperparams.log_dir,
|
||||
autosave=False,
|
||||
description='test demo'
|
||||
)
|
||||
|
||||
# ------------------------
|
||||
# 2 INIT TRAINER
|
||||
# ------------------------
|
||||
trainer = Trainer(
|
||||
experiment=exp,
|
||||
gpus=8,
|
||||
nb_gpu_nodes=2
|
||||
)
|
||||
|
||||
# ------------------------
|
||||
# 5 START TRAINING
|
||||
# ------------------------
|
||||
trainer.fit(model)
|
||||
|
||||
|
||||
if __name__ == '__main__':
|
||||
# use current dir for logging
|
||||
root_dir = os.path.dirname(os.path.realpath(__file__))
|
||||
log_dir = os.path.join(root_dir, 'pt_lightning_demo_logs')
|
||||
|
||||
parent_parser = HyperOptArgumentParser(strategy='grid_search', add_help=False)
|
||||
parent_parser.add_argument('--log_dir', type=str, default=log_dir,
|
||||
help='where to save logs')
|
||||
|
||||
# allow model to overwrite or extend args
|
||||
parser = LightningTemplateModel.add_model_specific_args(parent_parser, root_dir)
|
||||
hyperparams = parser.parse_args()
|
||||
|
||||
# ---------------------
|
||||
# RUN TRAINING
|
||||
# ---------------------
|
||||
main(hyperparams)
|
||||
@@ -6,7 +6,7 @@ import numpy as np
|
||||
import torch
|
||||
|
||||
from test_tube import HyperOptArgumentParser, Experiment
|
||||
from pytorch_lightning.models.trainer import Trainer
|
||||
from pytorch_lightning import Trainer
|
||||
from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint
|
||||
|
||||
from examples.new_project_templates.lightning_module_template import LightningTemplateModel
|
||||
@@ -25,14 +25,11 @@ def main(hparams):
|
||||
# ------------------------
|
||||
# 1 INIT LIGHTNING MODEL
|
||||
# ------------------------
|
||||
print('loading model...')
|
||||
model = LightningTemplateModel(hparams)
|
||||
print('model built')
|
||||
|
||||
# ------------------------
|
||||
# 2 INIT TEST TUBE EXP
|
||||
# 2 INIT EXP
|
||||
# ------------------------
|
||||
|
||||
# init experiment
|
||||
exp = Experiment(
|
||||
name=hyperparams.experiment_name,
|
||||
|
||||
@@ -6,7 +6,7 @@ import numpy as np
|
||||
import torch
|
||||
|
||||
from test_tube import HyperOptArgumentParser, Experiment
|
||||
from pytorch_lightning.models.trainer import Trainer
|
||||
from pytorch_lightning import Trainer
|
||||
from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint
|
||||
|
||||
from examples.new_project_templates.lightning_module_template import LightningTemplateModel
|
||||
@@ -110,5 +110,5 @@ if __name__ == '__main__':
|
||||
# RUN TRAINING
|
||||
# ---------------------
|
||||
# run on HPC cluster
|
||||
print('RUNNING INTERACTIVE MODE ON GPUS. gpu ids: %i' % hyperparams.gpus)
|
||||
print(f'RUNNING INTERACTIVE MODE ON GPUS. gpu ids: {hyperparams.gpus}')
|
||||
main(hyperparams)
|
||||
|
||||
@@ -6,7 +6,7 @@ import numpy as np
|
||||
import torch
|
||||
|
||||
from test_tube import HyperOptArgumentParser, Experiment
|
||||
from pytorch_lightning.models.trainer import Trainer
|
||||
from pytorch_lightning import Trainer
|
||||
from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint
|
||||
|
||||
from examples.new_project_templates.lightning_module_template import LightningTemplateModel
|
||||
@@ -110,5 +110,5 @@ if __name__ == '__main__':
|
||||
# RUN TRAINING
|
||||
# ---------------------
|
||||
# run on HPC cluster
|
||||
print('RUNNING INTERACTIVE MODE ON GPUS. gpu ids: %i' % hyperparams.gpus)
|
||||
print(f'RUNNING INTERACTIVE MODE ON GPUS. gpu ids: {hyperparams.gpus}')
|
||||
main(hyperparams)
|
||||
|
||||
@@ -6,7 +6,7 @@ import numpy as np
|
||||
import torch
|
||||
|
||||
from test_tube import HyperOptArgumentParser, Experiment
|
||||
from pytorch_lightning.models.trainer import Trainer
|
||||
from pytorch_lightning import Trainer
|
||||
from pytorch_lightning.callbacks import EarlyStopping, ModelCheckpoint
|
||||
|
||||
from examples.new_project_templates.lightning_module_template import LightningTemplateModel
|
||||
@@ -109,5 +109,5 @@ if __name__ == '__main__':
|
||||
# RUN TRAINING
|
||||
# ---------------------
|
||||
# run on HPC cluster
|
||||
print('RUNNING INTERACTIVE MODE ON GPUS. gpu ids: %i' % hyperparams.gpus)
|
||||
print(f'RUNNING INTERACTIVE MODE ON GPUS. gpu ids: {hyperparams.gpus}')
|
||||
main(hyperparams)
|
||||
|
||||
@@ -2,7 +2,7 @@ import os
|
||||
import sys
|
||||
|
||||
from test_tube import HyperOptArgumentParser, Experiment
|
||||
from pytorch_lightning.models.trainer import Trainer
|
||||
from pytorch_lightning import Trainer
|
||||
from pytorch_lightning.utilities.arg_parse import add_default_args
|
||||
from pytorch_lightning.callbacks.pt_callbacks import EarlyStopping, ModelCheckpoint
|
||||
|
||||
|
||||
@@ -0,0 +1,178 @@
|
||||
"""
|
||||
To run this template just do:
|
||||
python gan.py
|
||||
|
||||
After a few epochs, launch tensorboard to see the images being generated at every batch.
|
||||
|
||||
tensorboard --logdir default
|
||||
"""
|
||||
from argparse import ArgumentParser
|
||||
import os
|
||||
import numpy as np
|
||||
|
||||
import torchvision
|
||||
import torchvision.transforms as transforms
|
||||
from torchvision.datasets import MNIST
|
||||
|
||||
from torch.utils.data import DataLoader
|
||||
|
||||
import torch.nn as nn
|
||||
import torch.nn.functional as F
|
||||
import torch
|
||||
|
||||
import pytorch_lightning as pl
|
||||
from test_tube import Experiment
|
||||
|
||||
|
||||
class Generator(nn.Module):
|
||||
def __init__(self, latent_dim, img_shape):
|
||||
super(Generator, self).__init__()
|
||||
self.img_shape = img_shape
|
||||
|
||||
def block(in_feat, out_feat, normalize=True):
|
||||
layers = [nn.Linear(in_feat, out_feat)]
|
||||
if normalize:
|
||||
layers.append(nn.BatchNorm1d(out_feat, 0.8))
|
||||
layers.append(nn.LeakyReLU(0.2, inplace=True))
|
||||
return layers
|
||||
|
||||
self.model = nn.Sequential(
|
||||
*block(latent_dim, 128, normalize=False),
|
||||
*block(128, 256),
|
||||
*block(256, 512),
|
||||
*block(512, 1024),
|
||||
nn.Linear(1024, int(np.prod(img_shape))),
|
||||
nn.Tanh()
|
||||
)
|
||||
|
||||
def forward(self, z):
|
||||
img = self.model(z)
|
||||
img = img.view(img.size(0), *self.img_shape)
|
||||
return img
|
||||
|
||||
|
||||
class Discriminator(nn.Module):
|
||||
def __init__(self, img_shape):
|
||||
super(Discriminator, self).__init__()
|
||||
|
||||
self.model = nn.Sequential(
|
||||
nn.Linear(int(np.prod(img_shape)), 512),
|
||||
nn.LeakyReLU(0.2, inplace=True),
|
||||
nn.Linear(512, 256),
|
||||
nn.LeakyReLU(0.2, inplace=True),
|
||||
nn.Linear(256, 1),
|
||||
nn.Sigmoid(),
|
||||
)
|
||||
|
||||
def forward(self, img):
|
||||
img_flat = img.view(img.size(0), -1)
|
||||
validity = self.model(img_flat)
|
||||
|
||||
return validity
|
||||
|
||||
|
||||
class GAN(pl.LightningModule):
|
||||
|
||||
def __init__(self, hparams):
|
||||
super(GAN, self).__init__()
|
||||
self.hparams = hparams
|
||||
|
||||
# networks
|
||||
mnist_shape = (1, 28, 28)
|
||||
self.generator = Generator(latent_dim=hparams.latent_dim, img_shape=mnist_shape)
|
||||
self.discriminator = Discriminator(img_shape=mnist_shape)
|
||||
|
||||
# cache for generated images
|
||||
self.generated_imgs = None
|
||||
|
||||
def forward(self, z):
|
||||
return self.generator(z)
|
||||
|
||||
def adversarial_loss(self, y_hat, y):
|
||||
return F.binary_cross_entropy(y_hat, y)
|
||||
|
||||
def training_step(self, batch, batch_nb, optimizer_i):
|
||||
imgs, _ = batch
|
||||
|
||||
# train generator
|
||||
if optimizer_i == 0:
|
||||
# sample noise
|
||||
z = torch.randn(imgs.shape[0], self.hparams.latent_dim)
|
||||
|
||||
# match gpu device (or keep as cpu)
|
||||
if self.on_gpu:
|
||||
z = z.cuda(imgs.device.index)
|
||||
|
||||
# generate images
|
||||
self.generated_imgs = self.forward(z)
|
||||
|
||||
# log sampled images
|
||||
sample_imgs = self.generated_imgs[:6]
|
||||
grid = torchvision.utils.make_grid(sample_imgs)
|
||||
self.experiment.add_image('generated_images', grid, 0)
|
||||
|
||||
# ground truth result (ie: all fake)
|
||||
valid = torch.ones(imgs.size(0), 1)
|
||||
|
||||
# adversarial loss is binary cross-entropy
|
||||
g_loss = self.adversarial_loss(self.discriminator(self.generated_imgs), valid)
|
||||
|
||||
return g_loss
|
||||
|
||||
# train discriminator
|
||||
if optimizer_i == 1:
|
||||
# Measure discriminator's ability to classify real from generated samples
|
||||
|
||||
# how well can it label as real?
|
||||
valid = torch.ones(imgs.size(0), 1)
|
||||
real_loss = self.adversarial_loss(self.discriminator(imgs), valid)
|
||||
|
||||
# how well can it label as fake?
|
||||
fake = torch.zeros(imgs.size(0), 1)
|
||||
fake_loss = self.adversarial_loss(self.discriminator(self.generated_imgs.detach()), fake)
|
||||
|
||||
# discriminator loss is the average of these
|
||||
d_loss = (real_loss + fake_loss) / 2
|
||||
|
||||
return d_loss
|
||||
|
||||
def configure_optimizers(self):
|
||||
lr = self.hparams.lr
|
||||
b1 = self.hparams.b1
|
||||
b2 = self.hparams.b2
|
||||
|
||||
opt_g = torch.optim.Adam(self.generator.parameters(), lr=lr, betas=(b1, b2))
|
||||
opt_d = torch.optim.Adam(self.discriminator.parameters(), lr=lr, betas=(b1, b2))
|
||||
return [opt_g, opt_d], []
|
||||
|
||||
@pl.data_loader
|
||||
def tng_dataloader(self):
|
||||
transform = transforms.Compose([transforms.ToTensor(),
|
||||
transforms.Normalize([0.5], [0.5])])
|
||||
dataset = MNIST(os.getcwd(), train=True, download=True, transform=transform)
|
||||
return DataLoader(dataset, batch_size=self.hparams.batch_size)
|
||||
|
||||
|
||||
def main(hparams):
|
||||
# save tensorboard logs
|
||||
exp = Experiment(save_dir=os.getcwd())
|
||||
|
||||
# init model
|
||||
model = GAN(hparams)
|
||||
|
||||
# fit trainer on CPU
|
||||
trainer = pl.Trainer(experiment=exp, max_nb_epochs=200)
|
||||
trainer.fit(model)
|
||||
|
||||
|
||||
if __name__ == '__main__':
|
||||
parser = ArgumentParser()
|
||||
parser.add_argument("--batch_size", type=int, default=64, help="size of the batches")
|
||||
parser.add_argument("--lr", type=float, default=0.0002, help="adam: learning rate")
|
||||
parser.add_argument("--b1", type=float, default=0.5, help="adam: decay of first order momentum of gradient")
|
||||
parser.add_argument("--b2", type=float, default=0.999, help="adam: decay of first order momentum of gradient")
|
||||
parser.add_argument("--latent_dim", type=int, default=100, help="dimensionality of the latent space")
|
||||
|
||||
hparams = parser.parse_args()
|
||||
|
||||
main(hparams)
|
||||
@@ -2,9 +2,15 @@ site_name: PyTorch lightning Documentation
|
||||
theme:
|
||||
name: 'material'
|
||||
docs_dir: docs
|
||||
repo_name: 'williamFalcon/pytorch-lightning'
|
||||
repo_url: https://github.com/williamFalcon/pytorch-lightning
|
||||
site_dir: 'site'
|
||||
site_description: 'Documentation for PyTorch LightningModule, the researcher version of keras.'
|
||||
|
||||
dev_addr: '0.0.0.0:8000'
|
||||
#google_analytics: ['UA-aasd', 'sitename']
|
||||
|
||||
markdown_extensions:
|
||||
- codehilite:
|
||||
guess_lang: false
|
||||
linenums: true
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
from .models.trainer import Trainer
|
||||
from .trainer.trainer import Trainer
|
||||
from .root_module.root_module import LightningModule
|
||||
from .root_module.decorators import data_loader
|
||||
|
||||
|
||||
@@ -1,6 +1,7 @@
|
||||
from .pt_callbacks import EarlyStopping, ModelCheckpoint
|
||||
from .pt_callbacks import EarlyStopping, ModelCheckpoint, GradientAccumulationScheduler
|
||||
|
||||
__all__ = [
|
||||
'EarlyStopping',
|
||||
'ModelCheckpoint',
|
||||
'GradientAccumulationScheduler',
|
||||
]
|
||||
|
||||
@@ -1,5 +1,6 @@
|
||||
import os
|
||||
import shutil
|
||||
import warnings
|
||||
|
||||
import numpy as np
|
||||
|
||||
@@ -11,7 +12,6 @@ class Callback(object):
|
||||
# Properties
|
||||
params: dict. Training parameters
|
||||
(eg. verbosity, batch size, number of epochs...).
|
||||
model: instance of `keras.models.Model`.
|
||||
Reference of the model being trained.
|
||||
The `logs` dictionary that callback methods
|
||||
take as argument will contain keys for quantities relevant to
|
||||
@@ -254,6 +254,37 @@ class ModelCheckpoint(Callback):
|
||||
self.save_model(filepath, overwrite=False)
|
||||
|
||||
|
||||
class GradientAccumulationScheduler(Callback):
|
||||
"""Change gradient accumulation factor according to scheduling.
|
||||
# Arguments
|
||||
scheduling: dict, scheduling in format {epoch: accumulation_factor}
|
||||
"""
|
||||
def __init__(self, scheduling: dict):
|
||||
if scheduling == {}: # empty dict error
|
||||
raise TypeError("Empty dict cannot be interpreted correct")
|
||||
|
||||
for key in scheduling.keys():
|
||||
if not isinstance(key, int) or not isinstance(scheduling[key], int):
|
||||
raise TypeError("All epoches and accumulation factor must be integers")
|
||||
|
||||
minimal_epoch = min(scheduling.keys())
|
||||
if minimal_epoch < 1:
|
||||
msg = f"Epochs indexing from 1, epoch {minimal_epoch} cannot be interpreted correct"
|
||||
raise IndexError(msg)
|
||||
elif minimal_epoch != 1: # if user didnt define first epoch accumulation factor
|
||||
scheduling.update({1: 1})
|
||||
|
||||
self.scheduling = scheduling
|
||||
self.epochs = sorted(scheduling.keys())
|
||||
|
||||
def on_epoch_begin(self, epoch, trainer):
|
||||
epoch += 1 # indexing epochs from 1
|
||||
for i in reversed(range(len(self.epochs))):
|
||||
if epoch >= self.epochs[i]:
|
||||
trainer.accumulate_grad_batches = self.scheduling.get(self.epochs[i])
|
||||
break
|
||||
|
||||
|
||||
if __name__ == '__main__':
|
||||
c = EarlyStopping(min_delta=0.9, patience=2, verbose=True)
|
||||
losses = [10, 9, 8, 8, 6, 4.3, 5, 4.4, 2.8, 2.5]
|
||||
|
||||
@@ -56,6 +56,8 @@ class LightningDataParallel(DataParallel):
|
||||
# lightning
|
||||
if self.module.training:
|
||||
return self.module.training_step(*inputs[0], **kwargs[0])
|
||||
elif self.module.testing:
|
||||
return self.module.test_step(*inputs[0], **kwargs[0])
|
||||
else:
|
||||
return self.module.validation_step(*inputs[0], **kwargs[0])
|
||||
|
||||
@@ -89,6 +91,8 @@ class LightningDistributedDataParallel(DistributedDataParallel):
|
||||
# lightning
|
||||
if self.module.training:
|
||||
output = self.module.training_step(*inputs[0], **kwargs[0])
|
||||
elif self.module.testing:
|
||||
output = self.module.test_step(*inputs[0], **kwargs[0])
|
||||
else:
|
||||
output = self.module.validation_step(*inputs[0], **kwargs[0])
|
||||
else:
|
||||
@@ -153,6 +157,10 @@ def parallel_apply(modules, inputs, kwargs_tup=None, devices=None): # pragma: n
|
||||
# CHANGE
|
||||
if module.training:
|
||||
output = module.training_step(*input, **kwargs)
|
||||
|
||||
elif module.testing:
|
||||
output = module.test_step(*input, **kwargs)
|
||||
|
||||
else:
|
||||
output = module.validation_step(*input, **kwargs)
|
||||
# ---------------
|
||||
|
||||
@@ -1,3 +1,5 @@
|
||||
import traceback
|
||||
|
||||
|
||||
def data_loader(fn):
|
||||
"""
|
||||
@@ -10,8 +12,17 @@ def data_loader(fn):
|
||||
|
||||
@property
|
||||
def _data_loader(self):
|
||||
if not hasattr(self, attr_name):
|
||||
setattr(self, attr_name, fn(self))
|
||||
return getattr(self, attr_name)
|
||||
try:
|
||||
value = getattr(self, attr_name)
|
||||
except AttributeError:
|
||||
try:
|
||||
value = fn(self) # Lazy evaluation, done only once.
|
||||
except AttributeError as e:
|
||||
# Guard against AttributeError suppression. (Issue #142)
|
||||
traceback.print_exc()
|
||||
error = f'{fn.__name__}: An AttributeError was encountered: ' + str(e)
|
||||
raise RuntimeError(error) from e
|
||||
setattr(self, attr_name, value) # Memoize evaluation.
|
||||
return value
|
||||
|
||||
return _data_loader
|
||||
|
||||
@@ -5,7 +5,7 @@ class ModelHooks(torch.nn.Module):
|
||||
|
||||
def on_sanity_check_start(self):
|
||||
"""
|
||||
Called before starting validate
|
||||
Called before starting evaluate
|
||||
:return:
|
||||
"""
|
||||
pass
|
||||
|
||||
@@ -1,12 +1,3 @@
|
||||
import os
|
||||
import re
|
||||
|
||||
import torch
|
||||
|
||||
from pytorch_lightning.pt_overrides.override_data_parallel import (
|
||||
LightningDistributedDataParallel, LightningDataParallel)
|
||||
|
||||
|
||||
class ModelIO(object):
|
||||
|
||||
def on_load_checkpoint(self, checkpoint):
|
||||
@@ -41,221 +32,3 @@ class ModelIO(object):
|
||||
:return:
|
||||
"""
|
||||
pass
|
||||
|
||||
|
||||
class TrainerIO(object):
|
||||
|
||||
def __get_model(self):
|
||||
is_dp_module = isinstance(self.model, (LightningDistributedDataParallel,
|
||||
LightningDataParallel))
|
||||
model = self.model.module if is_dp_module else self.model
|
||||
return model
|
||||
|
||||
# --------------------
|
||||
# MODEL SAVE CHECKPOINT
|
||||
# --------------------
|
||||
def save_checkpoint(self, filepath):
|
||||
checkpoint = self.dump_checkpoint()
|
||||
|
||||
# do the actual save
|
||||
torch.save(checkpoint, filepath)
|
||||
|
||||
def restore(self, checkpoint_path, on_gpu):
|
||||
|
||||
if on_gpu:
|
||||
checkpoint = torch.load(checkpoint_path)
|
||||
else:
|
||||
checkpoint = torch.load(checkpoint_path, map_location=lambda storage, loc: storage)
|
||||
|
||||
# load training state (affects trainer only)
|
||||
self.restore_training_state(checkpoint)
|
||||
|
||||
# load model state
|
||||
model = self.__get_model()
|
||||
|
||||
# load the state_dict on the model automatically
|
||||
model.load_state_dict(checkpoint['state_dict'])
|
||||
|
||||
def dump_checkpoint(self):
|
||||
|
||||
checkpoint = {
|
||||
'epoch': self.current_epoch,
|
||||
'global_step': self.global_step
|
||||
}
|
||||
|
||||
if self.checkpoint_callback is not None:
|
||||
checkpoint['checkpoint_callback_best'] = self.checkpoint_callback.best
|
||||
|
||||
if self.early_stop_callback is not None:
|
||||
checkpoint['early_stop_callback_wait'] = self.early_stop_callback.wait
|
||||
checkpoint['early_stop_callback_patience'] = self.early_stop_callback.patience
|
||||
|
||||
# save optimizers
|
||||
optimizer_states = []
|
||||
for i, optimizer in enumerate(self.optimizers):
|
||||
optimizer_states.append(optimizer.state_dict())
|
||||
|
||||
checkpoint['optimizer_states'] = optimizer_states
|
||||
|
||||
# save lr schedulers
|
||||
lr_schedulers = []
|
||||
for i, scheduler in enumerate(self.lr_schedulers):
|
||||
lr_schedulers.append(scheduler.state_dict())
|
||||
|
||||
checkpoint['lr_schedulers'] = lr_schedulers
|
||||
|
||||
# add the state_dict from the model
|
||||
model = self.__get_model()
|
||||
checkpoint['state_dict'] = model.state_dict()
|
||||
|
||||
# give the model a chance to add a few things
|
||||
model.on_save_checkpoint(checkpoint)
|
||||
|
||||
return checkpoint
|
||||
|
||||
# --------------------
|
||||
# HPC IO
|
||||
# --------------------
|
||||
def enable_auto_hpc_walltime_manager(self):
|
||||
if self.cluster is None:
|
||||
return
|
||||
|
||||
# allow test tube to handle model check pointing automatically
|
||||
# only if proc 0 so we don't trigger world_size resubmits
|
||||
if self.proc_rank == 0:
|
||||
self.cluster.set_checkpoint_save_function(
|
||||
self.hpc_save,
|
||||
kwargs={
|
||||
'folderpath': self.checkpoint_callback.filepath,
|
||||
'experiment': self.experiment
|
||||
}
|
||||
)
|
||||
|
||||
self.cluster.set_checkpoint_load_function(
|
||||
self.hpc_load,
|
||||
kwargs={
|
||||
'folderpath': self.checkpoint_callback.filepath,
|
||||
'on_gpu': self.on_gpu
|
||||
}
|
||||
)
|
||||
|
||||
def restore_training_state(self, checkpoint):
|
||||
"""
|
||||
Restore trainer state.
|
||||
Model will get its change to update
|
||||
:param checkpoint:
|
||||
:return:
|
||||
"""
|
||||
if self.checkpoint_callback is not None:
|
||||
self.checkpoint_callback.best = checkpoint['checkpoint_callback_best']
|
||||
|
||||
if self.early_stop_callback is not None:
|
||||
self.early_stop_callback.wait = checkpoint['early_stop_callback_wait']
|
||||
self.early_stop_callback.patience = checkpoint['early_stop_callback_patience']
|
||||
|
||||
self.global_step = checkpoint['global_step']
|
||||
self.current_epoch = checkpoint['epoch']
|
||||
|
||||
# restore the optimizers
|
||||
optimizer_states = checkpoint['optimizer_states']
|
||||
for optimizer, opt_state in zip(self.optimizers, optimizer_states):
|
||||
optimizer.load_state_dict(opt_state)
|
||||
|
||||
# restore the lr schedulers
|
||||
lr_schedulers = checkpoint['lr_schedulers']
|
||||
for scheduler, lrs_state in zip(self.lr_schedulers, lr_schedulers):
|
||||
scheduler.load_state_dict(lrs_state)
|
||||
|
||||
# ----------------------------------
|
||||
# PRIVATE OPS
|
||||
# ----------------------------------
|
||||
def hpc_save(self, folderpath, experiment):
|
||||
# make sure the checkpoint folder exists
|
||||
os.makedirs(folderpath, exist_ok=True)
|
||||
|
||||
# save exp to make sure we get all the metrics
|
||||
experiment.save()
|
||||
|
||||
# close experiment to avoid issues
|
||||
experiment.close()
|
||||
|
||||
ckpt_number = self.max_ckpt_in_folder(folderpath) + 1
|
||||
|
||||
if not os.path.exists(folderpath):
|
||||
os.makedirs(folderpath, exist_ok=True)
|
||||
filepath = '{}/hpc_ckpt_{}.ckpt'.format(folderpath, ckpt_number)
|
||||
|
||||
# give model a chance to do something on hpc_save
|
||||
model = self.__get_model()
|
||||
checkpoint = self.dump_checkpoint()
|
||||
|
||||
model.on_hpc_save(checkpoint)
|
||||
|
||||
# do the actual save
|
||||
torch.save(checkpoint, filepath)
|
||||
|
||||
return filepath
|
||||
|
||||
def hpc_load(self, folderpath, on_gpu):
|
||||
filepath = '{}/hpc_ckpt_{}.ckpt'.format(folderpath, self.max_ckpt_in_folder(folderpath))
|
||||
|
||||
if on_gpu:
|
||||
checkpoint = torch.load(filepath)
|
||||
else:
|
||||
checkpoint = torch.load(filepath, map_location=lambda storage, loc: storage)
|
||||
|
||||
# load training state (affects trainer only)
|
||||
self.restore_training_state(checkpoint)
|
||||
|
||||
# load model state
|
||||
model = self.__get_model()
|
||||
|
||||
# load the state_dict on the model automatically
|
||||
model.load_state_dict(checkpoint['state_dict'])
|
||||
|
||||
# call model hook
|
||||
model.on_hpc_load(checkpoint)
|
||||
|
||||
def max_ckpt_in_folder(self, path, name_key='ckpt_'):
|
||||
files = os.listdir(path)
|
||||
files = [x for x in files if name_key in x]
|
||||
if len(files) == 0:
|
||||
return 0
|
||||
|
||||
ckpt_vs = []
|
||||
for name in files:
|
||||
name = name.split(name_key)[-1]
|
||||
name = re.sub('[^0-9]', '', name)
|
||||
ckpt_vs.append(int(name))
|
||||
|
||||
return max(ckpt_vs)
|
||||
|
||||
|
||||
def load_hparams_from_tags_csv(tags_csv):
|
||||
from argparse import Namespace
|
||||
import pandas as pd
|
||||
|
||||
tags_df = pd.read_csv(tags_csv)
|
||||
dic = tags_df.to_dict(orient='records')
|
||||
|
||||
ns_dict = {row['key']: convert(row['value']) for row in dic}
|
||||
|
||||
ns = Namespace(**ns_dict)
|
||||
return ns
|
||||
|
||||
|
||||
def convert(val):
|
||||
constructors = [int, float, str]
|
||||
|
||||
if type(val) is str:
|
||||
if val.lower() == 'true':
|
||||
return True
|
||||
if val.lower() == 'false':
|
||||
return False
|
||||
|
||||
for c in constructors:
|
||||
try:
|
||||
return c(val)
|
||||
except ValueError:
|
||||
pass
|
||||
return val
|
||||
|
||||
@@ -2,7 +2,8 @@ import torch
|
||||
|
||||
from pytorch_lightning.root_module.memory import ModelSummary
|
||||
from pytorch_lightning.root_module.grads import GradInformation
|
||||
from pytorch_lightning.root_module.model_saving import ModelIO, load_hparams_from_tags_csv
|
||||
from pytorch_lightning.trainer.trainer_io import load_hparams_from_tags_csv
|
||||
from pytorch_lightning.root_module.model_saving import ModelIO
|
||||
from pytorch_lightning.root_module.hooks import ModelHooks
|
||||
from pytorch_lightning.root_module.decorators import data_loader
|
||||
|
||||
@@ -23,6 +24,9 @@ class LightningModule(GradInformation, ModelIO, ModelHooks):
|
||||
|
||||
# track if gpu was requested for checkpointing
|
||||
self.on_gpu = False
|
||||
self.use_dp = False
|
||||
self.use_ddp = False
|
||||
self.use_amp = False
|
||||
|
||||
def forward(self, *args, **kwargs):
|
||||
"""
|
||||
@@ -52,6 +56,16 @@ class LightningModule(GradInformation, ModelIO, ModelHooks):
|
||||
"""
|
||||
pass
|
||||
|
||||
def test_step(self, *args, **kwargs):
|
||||
"""
|
||||
return whatever outputs will need to be aggregated in test_end
|
||||
OPTIONAL
|
||||
:param called with batch, batch_nb
|
||||
additional: dataset_i if multiple val datasets used
|
||||
:return:
|
||||
"""
|
||||
pass
|
||||
|
||||
def validation_end(self, outputs):
|
||||
"""
|
||||
Outputs has the appended output after each validation step
|
||||
@@ -61,6 +75,15 @@ class LightningModule(GradInformation, ModelIO, ModelHooks):
|
||||
"""
|
||||
pass
|
||||
|
||||
def test_end(self, outputs):
|
||||
"""
|
||||
Outputs has the appended output after each test step
|
||||
OPTIONAL
|
||||
:param outputs:
|
||||
:return: dic_with_metrics for tqdm
|
||||
"""
|
||||
pass
|
||||
|
||||
def configure_optimizers(self):
|
||||
"""
|
||||
Return a list of optimizers and a list of schedulers (could be empty)
|
||||
@@ -107,7 +130,7 @@ class LightningModule(GradInformation, ModelIO, ModelHooks):
|
||||
return None
|
||||
|
||||
@classmethod
|
||||
def load_from_metrics(cls, weights_path, tags_csv, on_gpu, map_location=None):
|
||||
def load_from_metrics(cls, weights_path, tags_csv, on_gpu):
|
||||
"""
|
||||
Primary way of loading model from csv weights path
|
||||
:param weights_path:
|
||||
@@ -119,13 +142,9 @@ class LightningModule(GradInformation, ModelIO, ModelHooks):
|
||||
hparams = load_hparams_from_tags_csv(tags_csv)
|
||||
hparams.__setattr__('on_gpu', on_gpu)
|
||||
|
||||
if on_gpu:
|
||||
if map_location is not None:
|
||||
checkpoint = torch.load(weights_path, map_location=map_location)
|
||||
else:
|
||||
checkpoint = torch.load(weights_path)
|
||||
else:
|
||||
checkpoint = torch.load(weights_path, map_location=lambda storage, loc: storage)
|
||||
# load on CPU only to avoid OOM issues
|
||||
# then its up to user to put back on GPUs
|
||||
checkpoint = torch.load(weights_path, map_location=lambda storage, loc: storage)
|
||||
|
||||
# load the state_dict on the model automatically
|
||||
model = cls(hparams)
|
||||
|
||||
@@ -1,3 +1,12 @@
|
||||
from .lm_test_module import LightningTestModel
|
||||
from .no_val_end_module import NoValEndTestModel
|
||||
from .no_val_module import NoValModel
|
||||
from .lm_test_module_base import LightningTestModelBase
|
||||
from .lm_test_module_mixins import (
|
||||
LightningValidationStepMixin,
|
||||
LightningValidationMixin,
|
||||
LightningValidationStepMultipleDataloadersMixin,
|
||||
LightningValidationMultipleDataloadersMixin,
|
||||
LightningTestStepMixin,
|
||||
LightningTestMixin,
|
||||
LightningTestStepMultipleDataloadersMixin,
|
||||
LightningTestMultipleDataloadersMixin,
|
||||
)
|
||||
|
||||
@@ -14,262 +14,14 @@ from test_tube import HyperOptArgumentParser
|
||||
from pytorch_lightning.root_module.root_module import LightningModule
|
||||
from pytorch_lightning import data_loader
|
||||
|
||||
from .lm_test_module_base import LightningTestModelBase
|
||||
from .lm_test_module_mixins import LightningValidationMixin, LightningTestMixin
|
||||
|
||||
class LightningTestModel(LightningModule):
|
||||
|
||||
class LightningTestModel(LightningValidationMixin, LightningTestMixin, LightningTestModelBase):
|
||||
"""
|
||||
Sample model to show how to define a template
|
||||
Most common test case. Validation and test dataloaders
|
||||
"""
|
||||
|
||||
def __init__(self, hparams, force_remove_distributed_sampler=False):
|
||||
"""
|
||||
Pass in parsed HyperOptArgumentParser to the model
|
||||
:param hparams:
|
||||
"""
|
||||
# init superclass
|
||||
super(LightningTestModel, self).__init__()
|
||||
self.hparams = hparams
|
||||
|
||||
self.batch_size = hparams.batch_size
|
||||
|
||||
# if you specify an example input, the summary will show input/output for each layer
|
||||
self.example_input_array = torch.rand(5, 28 * 28)
|
||||
|
||||
# remove to test warning for dist sampler
|
||||
self.force_remove_distributed_sampler = force_remove_distributed_sampler
|
||||
|
||||
# build model
|
||||
self.__build_model()
|
||||
|
||||
# ---------------------
|
||||
# MODEL SETUP
|
||||
# ---------------------
|
||||
def __build_model(self):
|
||||
"""
|
||||
Layout model
|
||||
:return:
|
||||
"""
|
||||
self.c_d1 = nn.Linear(in_features=self.hparams.in_features,
|
||||
out_features=self.hparams.hidden_dim)
|
||||
self.c_d1_bn = nn.BatchNorm1d(self.hparams.hidden_dim)
|
||||
self.c_d1_drop = nn.Dropout(self.hparams.drop_prob)
|
||||
|
||||
self.c_d2 = nn.Linear(in_features=self.hparams.hidden_dim,
|
||||
out_features=self.hparams.out_features)
|
||||
|
||||
# ---------------------
|
||||
# TRAINING
|
||||
# ---------------------
|
||||
def forward(self, x):
|
||||
"""
|
||||
No special modification required for lightning, define as you normally would
|
||||
:param x:
|
||||
:return:
|
||||
"""
|
||||
|
||||
x = self.c_d1(x)
|
||||
x = torch.tanh(x)
|
||||
x = self.c_d1_bn(x)
|
||||
x = self.c_d1_drop(x)
|
||||
|
||||
x = self.c_d2(x)
|
||||
logits = F.log_softmax(x, dim=1)
|
||||
|
||||
return logits
|
||||
|
||||
def loss(self, labels, logits):
|
||||
nll = F.nll_loss(logits, labels)
|
||||
return nll
|
||||
|
||||
def training_step(self, data_batch, batch_i):
|
||||
"""
|
||||
Lightning calls this inside the training loop
|
||||
:param data_batch:
|
||||
:return:
|
||||
"""
|
||||
# forward pass
|
||||
x, y = data_batch
|
||||
x = x.view(x.size(0), -1)
|
||||
|
||||
y_hat = self.forward(x)
|
||||
|
||||
# calculate loss
|
||||
loss_val = self.loss(y, y_hat)
|
||||
|
||||
# in DP mode (default) make sure if result is scalar, there's another dim in the beginning
|
||||
if self.trainer.use_dp:
|
||||
loss_val = loss_val.unsqueeze(0)
|
||||
|
||||
# alternate possible outputs to test
|
||||
if self.trainer.batch_nb % 1 == 0:
|
||||
output = OrderedDict({
|
||||
'loss': loss_val,
|
||||
'prog': {'some_val': loss_val * loss_val}
|
||||
})
|
||||
return output
|
||||
if self.trainer.batch_nb % 2 == 0:
|
||||
return loss_val
|
||||
|
||||
def validation_step(self, data_batch, batch_i, dataloader_i):
|
||||
"""
|
||||
Lightning calls this inside the validation loop
|
||||
:param data_batch:
|
||||
:return:
|
||||
"""
|
||||
x, y = data_batch
|
||||
x = x.view(x.size(0), -1)
|
||||
y_hat = self.forward(x)
|
||||
|
||||
loss_val = self.loss(y, y_hat)
|
||||
|
||||
# acc
|
||||
labels_hat = torch.argmax(y_hat, dim=1)
|
||||
val_acc = torch.sum(y == labels_hat).item() / (len(y) * 1.0)
|
||||
val_acc = torch.tensor(val_acc)
|
||||
|
||||
if self.on_gpu:
|
||||
val_acc = val_acc.cuda(loss_val.device.index)
|
||||
|
||||
# in DP mode (default) make sure if result is scalar, there's another dim in the beginning
|
||||
if self.trainer.use_dp:
|
||||
loss_val = loss_val.unsqueeze(0)
|
||||
val_acc = val_acc.unsqueeze(0)
|
||||
|
||||
# alternate possible outputs to test
|
||||
if batch_i % 1 == 0:
|
||||
output = OrderedDict({
|
||||
'val_loss': loss_val,
|
||||
'val_acc': val_acc,
|
||||
})
|
||||
return output
|
||||
if batch_i % 2 == 0:
|
||||
return val_acc
|
||||
|
||||
if batch_i % 3 == 0:
|
||||
output = OrderedDict({
|
||||
'val_loss': loss_val,
|
||||
'val_acc': val_acc,
|
||||
'test_dic': {'val_loss_a': loss_val}
|
||||
})
|
||||
return output
|
||||
if batch_i % 5 == 0:
|
||||
output = OrderedDict({
|
||||
f'val_loss_{dataloader_i}': loss_val,
|
||||
f'val_acc_{dataloader_i}': val_acc,
|
||||
})
|
||||
return output
|
||||
|
||||
def validation_end(self, outputs):
|
||||
"""
|
||||
Called at the end of validation to aggregate outputs
|
||||
:param outputs: list of individual outputs of each validation step
|
||||
:return:
|
||||
"""
|
||||
# if returned a scalar from validation_step, outputs is a list of tensor scalars
|
||||
# we return just the average in this case (if we want)
|
||||
# return torch.stack(outputs).mean()
|
||||
|
||||
val_loss_mean = 0
|
||||
val_acc_mean = 0
|
||||
for output in outputs:
|
||||
val_loss_mean += output['val_loss']
|
||||
val_acc_mean += output['val_acc']
|
||||
|
||||
val_loss_mean /= len(outputs)
|
||||
val_acc_mean /= len(outputs)
|
||||
|
||||
tqdm_dic = {'val_loss': val_loss_mean.item(), 'val_acc': val_acc_mean.item()}
|
||||
return tqdm_dic
|
||||
|
||||
def on_tng_metrics(self, logs):
|
||||
logs['some_tensor_to_test'] = torch.rand(1)
|
||||
|
||||
# ---------------------
|
||||
# TRAINING SETUP
|
||||
# ---------------------
|
||||
def configure_optimizers(self):
|
||||
"""
|
||||
return whatever optimizers we want here
|
||||
:return: list of optimizers
|
||||
"""
|
||||
# try no scheduler for this model (testing purposes)
|
||||
optimizer = optim.Adam(self.parameters(), lr=self.hparams.learning_rate)
|
||||
|
||||
# test returning only 1 list instead of 2
|
||||
return [optimizer]
|
||||
|
||||
def __dataloader(self, train):
|
||||
# init data generators
|
||||
transform = transforms.Compose([transforms.ToTensor(),
|
||||
transforms.Normalize((0.5,), (1.0,))])
|
||||
dataset = MNIST(root=self.hparams.data_root, train=train,
|
||||
transform=transform, download=True)
|
||||
|
||||
# when using multi-node we need to add the datasampler
|
||||
train_sampler = None
|
||||
batch_size = self.hparams.batch_size
|
||||
|
||||
try:
|
||||
if self.on_gpu and not self.force_remove_distributed_sampler:
|
||||
train_sampler = DistributedSampler(dataset, rank=self.trainer.proc_rank)
|
||||
batch_size = batch_size // self.trainer.world_size # scale batch size
|
||||
except Exception:
|
||||
pass
|
||||
|
||||
should_shuffle = train_sampler is None
|
||||
loader = DataLoader(
|
||||
dataset=dataset,
|
||||
batch_size=batch_size,
|
||||
shuffle=should_shuffle,
|
||||
sampler=train_sampler
|
||||
)
|
||||
|
||||
return loader
|
||||
|
||||
@data_loader
|
||||
def tng_dataloader(self):
|
||||
return self.__dataloader(train=True)
|
||||
|
||||
@data_loader
|
||||
def val_dataloader(self):
|
||||
return [self.__dataloader(train=False), self.__dataloader(train=False)]
|
||||
|
||||
@data_loader
|
||||
def test_dataloader(self):
|
||||
return self.__dataloader(train=False)
|
||||
|
||||
@staticmethod
|
||||
def add_model_specific_args(parent_parser, root_dir): # pragma: no cover
|
||||
"""
|
||||
Parameters you define here will be available to your model through self.hparams
|
||||
:param parent_parser:
|
||||
:param root_dir:
|
||||
:return:
|
||||
"""
|
||||
parser = HyperOptArgumentParser(strategy=parent_parser.strategy, parents=[parent_parser])
|
||||
|
||||
# param overwrites
|
||||
# parser.set_defaults(gradient_clip=5.0)
|
||||
|
||||
# network params
|
||||
parser.opt_list('--drop_prob', default=0.2, options=[0.2, 0.5], type=float, tunable=False)
|
||||
parser.add_argument('--in_features', default=28 * 28, type=int)
|
||||
parser.add_argument('--out_features', default=10, type=int)
|
||||
# use 500 for CPU, 50000 for GPU to see speed difference
|
||||
parser.add_argument('--hidden_dim', default=50000, type=int)
|
||||
|
||||
# data
|
||||
parser.add_argument('--data_root', default=os.path.join(root_dir, 'mnist'), type=str)
|
||||
|
||||
# training params (opt)
|
||||
parser.opt_list('--learning_rate', default=0.001 * 8, type=float,
|
||||
options=[0.0001, 0.0005, 0.001, 0.005],
|
||||
tunable=False)
|
||||
parser.opt_list('--optimizer_name', default='adam', type=str,
|
||||
options=['adam'], tunable=False)
|
||||
|
||||
# if using 2 nodes with 4 gpus each the batch size here
|
||||
# (256) will be 256 / (2*8) = 16 per gpu
|
||||
parser.opt_list('--batch_size', default=256 * 8, type=int,
|
||||
options=[32, 64, 128, 256], tunable=False,
|
||||
help='batch size will be divided over all gpus being used across all nodes')
|
||||
return parser
|
||||
|
||||
+8
-10
@@ -15,9 +15,10 @@ from pytorch_lightning.root_module.root_module import LightningModule
|
||||
from pytorch_lightning import data_loader
|
||||
|
||||
|
||||
class NoValModel(LightningModule):
|
||||
class LightningTestModelBase(LightningModule):
|
||||
"""
|
||||
Sample model to show how to define a template
|
||||
Base LightningModule for testing. Implements only the required
|
||||
interface
|
||||
"""
|
||||
|
||||
def __init__(self, hparams, force_remove_distributed_sampler=False):
|
||||
@@ -26,7 +27,7 @@ class NoValModel(LightningModule):
|
||||
:param hparams:
|
||||
"""
|
||||
# init superclass
|
||||
super(NoValModel, self).__init__()
|
||||
super(LightningTestModelBase, self).__init__()
|
||||
self.hparams = hparams
|
||||
|
||||
self.batch_size = hparams.batch_size
|
||||
@@ -109,9 +110,6 @@ class NoValModel(LightningModule):
|
||||
if self.trainer.batch_nb % 2 == 0:
|
||||
return loss_val
|
||||
|
||||
def on_tng_metrics(self, logs):
|
||||
logs['some_tensor_to_test'] = torch.rand(1)
|
||||
|
||||
# ---------------------
|
||||
# TRAINING SETUP
|
||||
# ---------------------
|
||||
@@ -124,9 +122,9 @@ class NoValModel(LightningModule):
|
||||
optimizer = optim.Adam(self.parameters(), lr=self.hparams.learning_rate)
|
||||
|
||||
# test returning only 1 list instead of 2
|
||||
return [optimizer]
|
||||
return optimizer
|
||||
|
||||
def __dataloader(self, train):
|
||||
def _dataloader(self, train):
|
||||
# init data generators
|
||||
transform = transforms.Compose([transforms.ToTensor(),
|
||||
transforms.Normalize((0.5,), (1.0,))])
|
||||
@@ -138,7 +136,7 @@ class NoValModel(LightningModule):
|
||||
batch_size = self.hparams.batch_size
|
||||
|
||||
try:
|
||||
if self.on_gpu and not self.force_remove_distributed_sampler:
|
||||
if self.use_ddp and not self.force_remove_distributed_sampler:
|
||||
train_sampler = DistributedSampler(dataset, rank=self.trainer.proc_rank)
|
||||
batch_size = batch_size // self.trainer.world_size # scale batch size
|
||||
except Exception:
|
||||
@@ -156,7 +154,7 @@ class NoValModel(LightningModule):
|
||||
|
||||
@data_loader
|
||||
def tng_dataloader(self):
|
||||
return self.__dataloader(train=True)
|
||||
return self._dataloader(train=True)
|
||||
|
||||
@staticmethod
|
||||
def add_model_specific_args(parent_parser, root_dir): # pragma: no cover
|
||||
@@ -0,0 +1,387 @@
|
||||
import os
|
||||
from collections import OrderedDict
|
||||
|
||||
import torch
|
||||
import torch.nn as nn
|
||||
import torch.nn.functional as F
|
||||
from torch import optim
|
||||
from torch.utils.data import DataLoader
|
||||
from torch.utils.data.distributed import DistributedSampler
|
||||
from torchvision.datasets import MNIST
|
||||
from torchvision import transforms
|
||||
from test_tube import HyperOptArgumentParser
|
||||
|
||||
from pytorch_lightning.root_module.root_module import LightningModule
|
||||
from pytorch_lightning import data_loader
|
||||
|
||||
|
||||
class LightningValidationStepMixin:
|
||||
"""
|
||||
Add val_dataloader and validation_step methods for the case
|
||||
when val_dataloader returns a single dataloader
|
||||
"""
|
||||
|
||||
@data_loader
|
||||
def val_dataloader(self):
|
||||
return self._dataloader(train=False)
|
||||
|
||||
def validation_step(self, data_batch, batch_i):
|
||||
"""
|
||||
Lightning calls this inside the validation loop
|
||||
:param data_batch:
|
||||
:return:
|
||||
"""
|
||||
x, y = data_batch
|
||||
x = x.view(x.size(0), -1)
|
||||
y_hat = self.forward(x)
|
||||
|
||||
loss_val = self.loss(y, y_hat)
|
||||
|
||||
# acc
|
||||
labels_hat = torch.argmax(y_hat, dim=1)
|
||||
val_acc = torch.sum(y == labels_hat).item() / (len(y) * 1.0)
|
||||
val_acc = torch.tensor(val_acc)
|
||||
|
||||
if self.on_gpu:
|
||||
val_acc = val_acc.cuda(loss_val.device.index)
|
||||
|
||||
# in DP mode (default) make sure if result is scalar, there's another dim in the beginning
|
||||
if self.trainer.use_dp:
|
||||
loss_val = loss_val.unsqueeze(0)
|
||||
val_acc = val_acc.unsqueeze(0)
|
||||
|
||||
# alternate possible outputs to test
|
||||
if batch_i % 1 == 0:
|
||||
output = OrderedDict({
|
||||
'val_loss': loss_val,
|
||||
'val_acc': val_acc,
|
||||
})
|
||||
return output
|
||||
if batch_i % 2 == 0:
|
||||
return val_acc
|
||||
|
||||
if batch_i % 3 == 0:
|
||||
output = OrderedDict({
|
||||
'val_loss': loss_val,
|
||||
'val_acc': val_acc,
|
||||
'test_dic': {'val_loss_a': loss_val}
|
||||
})
|
||||
return output
|
||||
|
||||
|
||||
class LightningValidationMixin(LightningValidationStepMixin):
|
||||
"""
|
||||
Add val_dataloader, validation_step, and validation_end methods for the case
|
||||
when val_dataloader returns a single dataloader
|
||||
"""
|
||||
|
||||
def validation_end(self, outputs):
|
||||
"""
|
||||
Called at the end of validation to aggregate outputs
|
||||
:param outputs: list of individual outputs of each validation step
|
||||
:return:
|
||||
"""
|
||||
# if returned a scalar from validation_step, outputs is a list of tensor scalars
|
||||
# we return just the average in this case (if we want)
|
||||
# return torch.stack(outputs).mean()
|
||||
val_loss_mean = 0
|
||||
val_acc_mean = 0
|
||||
for output in outputs:
|
||||
val_loss = output['val_loss']
|
||||
|
||||
# reduce manually when using dp
|
||||
if self.trainer.use_dp:
|
||||
val_loss = torch.mean(val_loss)
|
||||
val_loss_mean += val_loss
|
||||
|
||||
# reduce manually when using dp
|
||||
val_acc = output['val_acc']
|
||||
if self.trainer.use_dp:
|
||||
val_acc = torch.mean(val_acc)
|
||||
|
||||
val_acc_mean += val_acc
|
||||
|
||||
val_loss_mean /= len(outputs)
|
||||
val_acc_mean /= len(outputs)
|
||||
|
||||
tqdm_dic = {'val_loss': val_loss_mean.item(), 'val_acc': val_acc_mean.item()}
|
||||
return tqdm_dic
|
||||
|
||||
|
||||
class LightningValidationStepMultipleDataloadersMixin:
|
||||
"""
|
||||
Add val_dataloader and validation_step methods for the case
|
||||
when val_dataloader returns multiple dataloaders
|
||||
"""
|
||||
|
||||
@data_loader
|
||||
def val_dataloader(self):
|
||||
return [self._dataloader(train=False), self._dataloader(train=False)]
|
||||
|
||||
def validation_step(self, data_batch, batch_i, dataloader_i):
|
||||
"""
|
||||
Lightning calls this inside the validation loop
|
||||
:param data_batch:
|
||||
:return:
|
||||
"""
|
||||
x, y = data_batch
|
||||
x = x.view(x.size(0), -1)
|
||||
y_hat = self.forward(x)
|
||||
|
||||
loss_val = self.loss(y, y_hat)
|
||||
|
||||
# acc
|
||||
labels_hat = torch.argmax(y_hat, dim=1)
|
||||
val_acc = torch.sum(y == labels_hat).item() / (len(y) * 1.0)
|
||||
val_acc = torch.tensor(val_acc)
|
||||
|
||||
if self.on_gpu:
|
||||
val_acc = val_acc.cuda(loss_val.device.index)
|
||||
|
||||
# in DP mode (default) make sure if result is scalar, there's another dim in the beginning
|
||||
if self.trainer.use_dp:
|
||||
loss_val = loss_val.unsqueeze(0)
|
||||
val_acc = val_acc.unsqueeze(0)
|
||||
|
||||
# alternate possible outputs to test
|
||||
if batch_i % 1 == 0:
|
||||
output = OrderedDict({
|
||||
'val_loss': loss_val,
|
||||
'val_acc': val_acc,
|
||||
})
|
||||
return output
|
||||
if batch_i % 2 == 0:
|
||||
return val_acc
|
||||
|
||||
if batch_i % 3 == 0:
|
||||
output = OrderedDict({
|
||||
'val_loss': loss_val,
|
||||
'val_acc': val_acc,
|
||||
'test_dic': {'val_loss_a': loss_val}
|
||||
})
|
||||
return output
|
||||
if batch_i % 5 == 0:
|
||||
output = OrderedDict({
|
||||
f'val_loss_{dataloader_i}': loss_val,
|
||||
f'val_acc_{dataloader_i}': val_acc,
|
||||
})
|
||||
return output
|
||||
|
||||
|
||||
class LightningValidationMultipleDataloadersMixin(LightningValidationStepMultipleDataloadersMixin):
|
||||
"""
|
||||
Add val_dataloader, validation_step, and validation_end methods for the case
|
||||
when val_dataloader returns multiple dataloaders
|
||||
"""
|
||||
|
||||
def validation_end(self, outputs):
|
||||
"""
|
||||
Called at the end of validation to aggregate outputs
|
||||
:param outputs: list of individual outputs of each validation step
|
||||
:return:
|
||||
"""
|
||||
# if returned a scalar from validation_step, outputs is a list of tensor scalars
|
||||
# we return just the average in this case (if we want)
|
||||
# return torch.stack(outputs).mean()
|
||||
val_loss_mean = 0
|
||||
val_acc_mean = 0
|
||||
i = 0
|
||||
for dl_output in outputs:
|
||||
for output in dl_output:
|
||||
val_loss = output['val_loss']
|
||||
|
||||
# reduce manually when using dp
|
||||
if self.trainer.use_dp:
|
||||
val_loss = torch.mean(val_loss)
|
||||
val_loss_mean += val_loss
|
||||
|
||||
# reduce manually when using dp
|
||||
val_acc = output['val_acc']
|
||||
if self.trainer.use_dp:
|
||||
val_acc = torch.mean(val_acc)
|
||||
|
||||
val_acc_mean += val_acc
|
||||
i += 1
|
||||
|
||||
val_loss_mean /= i
|
||||
val_acc_mean /= i
|
||||
|
||||
tqdm_dic = {'val_loss': val_loss_mean.item(), 'val_acc': val_acc_mean.item()}
|
||||
return tqdm_dic
|
||||
|
||||
|
||||
class LightningTestStepMixin:
|
||||
|
||||
@data_loader
|
||||
def test_dataloader(self):
|
||||
return self._dataloader(train=False)
|
||||
|
||||
def test_step(self, data_batch, batch_i):
|
||||
"""
|
||||
Lightning calls this inside the validation loop
|
||||
:param data_batch:
|
||||
:return:
|
||||
"""
|
||||
x, y = data_batch
|
||||
x = x.view(x.size(0), -1)
|
||||
y_hat = self.forward(x)
|
||||
|
||||
loss_test = self.loss(y, y_hat)
|
||||
|
||||
# acc
|
||||
labels_hat = torch.argmax(y_hat, dim=1)
|
||||
test_acc = torch.sum(y == labels_hat).item() / (len(y) * 1.0)
|
||||
test_acc = torch.tensor(test_acc)
|
||||
|
||||
if self.on_gpu:
|
||||
test_acc = test_acc.cuda(loss_test.device.index)
|
||||
|
||||
# in DP mode (default) make sure if result is scalar, there's another dim in the beginning
|
||||
if self.trainer.use_dp:
|
||||
loss_test = loss_test.unsqueeze(0)
|
||||
test_acc = test_acc.unsqueeze(0)
|
||||
|
||||
# alternate possible outputs to test
|
||||
if batch_i % 1 == 0:
|
||||
output = OrderedDict({
|
||||
'test_loss': loss_test,
|
||||
'test_acc': test_acc,
|
||||
})
|
||||
return output
|
||||
if batch_i % 2 == 0:
|
||||
return test_acc
|
||||
|
||||
if batch_i % 3 == 0:
|
||||
output = OrderedDict({
|
||||
'test_loss': loss_test,
|
||||
'test_acc': test_acc,
|
||||
'test_dic': {'test_loss_a': loss_test}
|
||||
})
|
||||
return output
|
||||
|
||||
|
||||
class LightningTestMixin(LightningTestStepMixin):
|
||||
def test_end(self, outputs):
|
||||
"""
|
||||
Called at the end of validation to aggregate outputs
|
||||
:param outputs: list of individual outputs of each validation step
|
||||
:return:
|
||||
"""
|
||||
# if returned a scalar from test_step, outputs is a list of tensor scalars
|
||||
# we return just the average in this case (if we want)
|
||||
# return torch.stack(outputs).mean()
|
||||
test_loss_mean = 0
|
||||
test_acc_mean = 0
|
||||
for output in outputs:
|
||||
test_loss = output['test_loss']
|
||||
|
||||
# reduce manually when using dp
|
||||
if self.trainer.use_dp:
|
||||
test_loss = torch.mean(test_loss)
|
||||
test_loss_mean += test_loss
|
||||
|
||||
# reduce manually when using dp
|
||||
test_acc = output['test_acc']
|
||||
if self.trainer.use_dp:
|
||||
test_acc = torch.mean(test_acc)
|
||||
|
||||
test_acc_mean += test_acc
|
||||
|
||||
test_loss_mean /= len(outputs)
|
||||
test_acc_mean /= len(outputs)
|
||||
|
||||
tqdm_dic = {'test_loss': test_loss_mean.item(), 'test_acc': test_acc_mean.item()}
|
||||
return tqdm_dic
|
||||
|
||||
|
||||
class LightningTestStepMultipleDataloadersMixin:
|
||||
|
||||
@data_loader
|
||||
def test_dataloader(self):
|
||||
return [self._dataloader(train=False), self._dataloader(train=False)]
|
||||
|
||||
def test_step(self, data_batch, batch_i, dataloader_i):
|
||||
"""
|
||||
Lightning calls this inside the validation loop
|
||||
:param data_batch:
|
||||
:return:
|
||||
"""
|
||||
x, y = data_batch
|
||||
x = x.view(x.size(0), -1)
|
||||
y_hat = self.forward(x)
|
||||
|
||||
loss_test = self.loss(y, y_hat)
|
||||
|
||||
# acc
|
||||
labels_hat = torch.argmax(y_hat, dim=1)
|
||||
test_acc = torch.sum(y == labels_hat).item() / (len(y) * 1.0)
|
||||
test_acc = torch.tensor(test_acc)
|
||||
|
||||
if self.on_gpu:
|
||||
test_acc = test_acc.cuda(loss_test.device.index)
|
||||
|
||||
# in DP mode (default) make sure if result is scalar, there's another dim in the beginning
|
||||
if self.trainer.use_dp:
|
||||
loss_test = loss_test.unsqueeze(0)
|
||||
test_acc = test_acc.unsqueeze(0)
|
||||
|
||||
# alternate possible outputs to test
|
||||
if batch_i % 1 == 0:
|
||||
output = OrderedDict({
|
||||
'test_loss': loss_test,
|
||||
'test_acc': test_acc,
|
||||
})
|
||||
return output
|
||||
if batch_i % 2 == 0:
|
||||
return test_acc
|
||||
|
||||
if batch_i % 3 == 0:
|
||||
output = OrderedDict({
|
||||
'test_loss': loss_test,
|
||||
'test_acc': test_acc,
|
||||
'test_dic': {'test_loss_a': loss_test}
|
||||
})
|
||||
return output
|
||||
if batch_i % 5 == 0:
|
||||
output = OrderedDict({
|
||||
f'test_loss_{dataloader_i}': loss_test,
|
||||
f'test_acc_{dataloader_i}': test_acc,
|
||||
})
|
||||
return output
|
||||
|
||||
|
||||
class LightningTestMultipleDataloadersMixin(LightningTestStepMultipleDataloadersMixin):
|
||||
def test_end(self, outputs):
|
||||
"""
|
||||
Called at the end of validation to aggregate outputs
|
||||
:param outputs: list of individual outputs of each validation step
|
||||
:return:
|
||||
"""
|
||||
# if returned a scalar from test_step, outputs is a list of tensor scalars
|
||||
# we return just the average in this case (if we want)
|
||||
# return torch.stack(outputs).mean()
|
||||
test_loss_mean = 0
|
||||
test_acc_mean = 0
|
||||
i = 0
|
||||
for dl_output in outputs:
|
||||
for output in dl_output:
|
||||
test_loss = output['test_loss']
|
||||
|
||||
# reduce manually when using dp
|
||||
if self.trainer.use_dp:
|
||||
test_loss = torch.mean(test_loss)
|
||||
test_loss_mean += test_loss
|
||||
|
||||
# reduce manually when using dp
|
||||
test_acc = output['test_acc']
|
||||
if self.trainer.use_dp:
|
||||
test_acc = torch.mean(test_acc)
|
||||
|
||||
test_acc_mean += test_acc
|
||||
i += 1
|
||||
|
||||
test_loss_mean /= i
|
||||
test_acc_mean /= i
|
||||
|
||||
tqdm_dic = {'test_loss': test_loss_mean.item(), 'test_acc': test_acc_mean.item()}
|
||||
return tqdm_dic
|
||||
@@ -1,247 +0,0 @@
|
||||
import os
|
||||
from collections import OrderedDict
|
||||
|
||||
import torch
|
||||
import torch.nn as nn
|
||||
import torch.nn.functional as F
|
||||
from torch import optim
|
||||
from torch.utils.data import DataLoader
|
||||
from torch.utils.data.distributed import DistributedSampler
|
||||
from torchvision.datasets import MNIST
|
||||
from torchvision import transforms
|
||||
from test_tube import HyperOptArgumentParser
|
||||
|
||||
from pytorch_lightning.root_module.root_module import LightningModule
|
||||
from pytorch_lightning import data_loader
|
||||
|
||||
|
||||
class NoValEndTestModel(LightningModule):
|
||||
"""
|
||||
Sample model to show how to define a template
|
||||
"""
|
||||
|
||||
def __init__(self, hparams, force_remove_distributed_sampler=False):
|
||||
"""
|
||||
Pass in parsed HyperOptArgumentParser to the model
|
||||
:param hparams:
|
||||
"""
|
||||
# init superclass
|
||||
super(NoValEndTestModel, self).__init__()
|
||||
self.hparams = hparams
|
||||
|
||||
self.batch_size = hparams.batch_size
|
||||
|
||||
# if you specify an example input, the summary will show input/output for each layer
|
||||
self.example_input_array = torch.rand(5, 28 * 28)
|
||||
|
||||
# remove to test warning for dist sampler
|
||||
self.force_remove_distributed_sampler = force_remove_distributed_sampler
|
||||
|
||||
# build model
|
||||
self.__build_model()
|
||||
|
||||
# ---------------------
|
||||
# MODEL SETUP
|
||||
# ---------------------
|
||||
def __build_model(self):
|
||||
"""
|
||||
Layout model
|
||||
:return:
|
||||
"""
|
||||
self.c_d1 = nn.Linear(in_features=self.hparams.in_features,
|
||||
out_features=self.hparams.hidden_dim)
|
||||
self.c_d1_bn = nn.BatchNorm1d(self.hparams.hidden_dim)
|
||||
self.c_d1_drop = nn.Dropout(self.hparams.drop_prob)
|
||||
|
||||
self.c_d2 = nn.Linear(in_features=self.hparams.hidden_dim,
|
||||
out_features=self.hparams.out_features)
|
||||
|
||||
# ---------------------
|
||||
# TRAINING
|
||||
# ---------------------
|
||||
def forward(self, x):
|
||||
"""
|
||||
No special modification required for lightning, define as you normally would
|
||||
:param x:
|
||||
:return:
|
||||
"""
|
||||
|
||||
x = self.c_d1(x)
|
||||
x = torch.tanh(x)
|
||||
x = self.c_d1_bn(x)
|
||||
x = self.c_d1_drop(x)
|
||||
|
||||
x = self.c_d2(x)
|
||||
logits = F.log_softmax(x, dim=1)
|
||||
|
||||
return logits
|
||||
|
||||
def loss(self, labels, logits):
|
||||
nll = F.nll_loss(logits, labels)
|
||||
return nll
|
||||
|
||||
def training_step(self, data_batch, batch_i):
|
||||
"""
|
||||
Lightning calls this inside the training loop
|
||||
:param data_batch:
|
||||
:return:
|
||||
"""
|
||||
# forward pass
|
||||
x, y = data_batch
|
||||
x = x.view(x.size(0), -1)
|
||||
|
||||
y_hat = self.forward(x)
|
||||
|
||||
# calculate loss
|
||||
loss_val = self.loss(y, y_hat)
|
||||
|
||||
# in DP mode (default) make sure if result is scalar, there's another dim in the beginning
|
||||
if self.trainer.use_dp:
|
||||
loss_val = loss_val.unsqueeze(0)
|
||||
|
||||
# alternate possible outputs to test
|
||||
if self.trainer.batch_nb % 1 == 0:
|
||||
output = OrderedDict({
|
||||
'loss': loss_val,
|
||||
'prog': {'some_val': loss_val * loss_val}
|
||||
})
|
||||
return output
|
||||
if self.trainer.batch_nb % 2 == 0:
|
||||
return loss_val
|
||||
|
||||
def validation_step(self, data_batch, batch_nb):
|
||||
"""
|
||||
Lightning calls this inside the validation loop
|
||||
:param data_batch:
|
||||
:return:
|
||||
"""
|
||||
x, y = data_batch
|
||||
x = x.view(x.size(0), -1)
|
||||
y_hat = self.forward(x)
|
||||
|
||||
loss_val = self.loss(y, y_hat)
|
||||
|
||||
# acc
|
||||
labels_hat = torch.argmax(y_hat, dim=1)
|
||||
val_acc = torch.sum(y == labels_hat).item() / (len(y) * 1.0)
|
||||
val_acc = torch.tensor(val_acc)
|
||||
|
||||
if self.on_gpu:
|
||||
val_acc = val_acc.cuda(loss_val.device.index)
|
||||
|
||||
# in DP mode (default) make sure if result is scalar, there's another dim in the beginning
|
||||
if self.trainer.use_dp:
|
||||
loss_val = loss_val.unsqueeze(0)
|
||||
val_acc = val_acc.unsqueeze(0)
|
||||
|
||||
# alternate possible outputs to test
|
||||
if batch_nb % 1 == 0:
|
||||
output = OrderedDict({
|
||||
'val_loss': loss_val,
|
||||
'val_acc': val_acc,
|
||||
})
|
||||
return output
|
||||
if batch_nb % 2 == 0:
|
||||
return val_acc
|
||||
|
||||
if batch_nb % 3 == 0:
|
||||
output = OrderedDict({
|
||||
'val_loss': loss_val,
|
||||
'val_acc': val_acc,
|
||||
'test_dic': {'val_loss_a': loss_val}
|
||||
})
|
||||
return output
|
||||
|
||||
def on_tng_metrics(self, logs):
|
||||
logs['some_tensor_to_test'] = torch.rand(1)
|
||||
|
||||
# ---------------------
|
||||
# TRAINING SETUP
|
||||
# ---------------------
|
||||
def configure_optimizers(self):
|
||||
"""
|
||||
return whatever optimizers we want here
|
||||
:return: list of optimizers
|
||||
"""
|
||||
# try no scheduler for this model (testing purposes)
|
||||
optimizer = optim.Adam(self.parameters(), lr=self.hparams.learning_rate)
|
||||
|
||||
# test returning only 1 list instead of 2
|
||||
return [optimizer]
|
||||
|
||||
def __dataloader(self, train):
|
||||
# init data generators
|
||||
transform = transforms.Compose([transforms.ToTensor(),
|
||||
transforms.Normalize((0.5,), (1.0,))])
|
||||
dataset = MNIST(root=self.hparams.data_root, train=train,
|
||||
transform=transform, download=True)
|
||||
|
||||
# when using multi-node we need to add the datasampler
|
||||
train_sampler = None
|
||||
batch_size = self.hparams.batch_size
|
||||
|
||||
try:
|
||||
if self.on_gpu and not self.force_remove_distributed_sampler:
|
||||
train_sampler = DistributedSampler(dataset, rank=self.trainer.proc_rank)
|
||||
batch_size = batch_size // self.trainer.world_size # scale batch size
|
||||
except Exception:
|
||||
pass
|
||||
|
||||
should_shuffle = train_sampler is None
|
||||
loader = DataLoader(
|
||||
dataset=dataset,
|
||||
batch_size=batch_size,
|
||||
shuffle=should_shuffle,
|
||||
sampler=train_sampler
|
||||
)
|
||||
|
||||
return loader
|
||||
|
||||
@data_loader
|
||||
def tng_dataloader(self):
|
||||
return self.__dataloader(train=True)
|
||||
|
||||
@data_loader
|
||||
def val_dataloader(self):
|
||||
return self.__dataloader(train=False)
|
||||
|
||||
@data_loader
|
||||
def test_dataloader(self):
|
||||
return self.__dataloader(train=False)
|
||||
|
||||
@staticmethod
|
||||
def add_model_specific_args(parent_parser, root_dir): # pragma: no cover
|
||||
"""
|
||||
Parameters you define here will be available to your model through self.hparams
|
||||
:param parent_parser:
|
||||
:param root_dir:
|
||||
:return:
|
||||
"""
|
||||
parser = HyperOptArgumentParser(strategy=parent_parser.strategy, parents=[parent_parser])
|
||||
|
||||
# param overwrites
|
||||
# parser.set_defaults(gradient_clip=5.0)
|
||||
|
||||
# network params
|
||||
parser.opt_list('--drop_prob', default=0.2, options=[0.2, 0.5], type=float, tunable=False)
|
||||
parser.add_argument('--in_features', default=28 * 28, type=int)
|
||||
parser.add_argument('--out_features', default=10, type=int)
|
||||
# use 500 for CPU, 50000 for GPU to see speed difference
|
||||
parser.add_argument('--hidden_dim', default=50000, type=int)
|
||||
|
||||
# data
|
||||
parser.add_argument('--data_root', default=os.path.join(root_dir, 'mnist'), type=str)
|
||||
|
||||
# training params (opt)
|
||||
parser.opt_list('--learning_rate', default=0.001 * 8, type=float,
|
||||
options=[0.0001, 0.0005, 0.001, 0.005],
|
||||
tunable=False)
|
||||
parser.opt_list('--optimizer_name', default='adam', type=str,
|
||||
options=['adam'], tunable=False)
|
||||
|
||||
# if using 2 nodes with 4 gpus each the batch size here
|
||||
# (256) will be 256 / (2*8) = 16 per gpu
|
||||
parser.opt_list('--batch_size', default=256 * 8, type=int,
|
||||
options=[32, 64, 128, 256], tunable=False,
|
||||
help='batch size will be divided over all gpus being used across all nodes')
|
||||
return parser
|
||||
File diff suppressed because it is too large
Load Diff
@@ -0,0 +1,325 @@
|
||||
import os
|
||||
import re
|
||||
import signal
|
||||
import pdb
|
||||
from subprocess import call
|
||||
|
||||
import torch
|
||||
|
||||
from pytorch_lightning.pt_overrides.override_data_parallel import (
|
||||
LightningDistributedDataParallel, LightningDataParallel)
|
||||
|
||||
|
||||
class TrainerIO(object):
|
||||
|
||||
def __get_model(self):
|
||||
is_dp_module = isinstance(self.model, (LightningDistributedDataParallel,
|
||||
LightningDataParallel))
|
||||
model = self.model.module if is_dp_module else self.model
|
||||
return model
|
||||
|
||||
# --------------------
|
||||
# CHECK-POINTING
|
||||
# --------------------
|
||||
def restore_weights(self, model):
|
||||
"""
|
||||
To restore weights we have two cases.
|
||||
First, if we use the same experiment version, then restore the latest ckpt.
|
||||
AFTER that, if we find weights from hpc checkpoint, then restore that.
|
||||
:param model:
|
||||
:return:
|
||||
"""
|
||||
# restore weights if same exp version
|
||||
self.restore_state_if_checkpoint_exists(model)
|
||||
|
||||
# if script called from hpc resubmit, load weights
|
||||
self.restore_hpc_weights_if_needed(model)
|
||||
|
||||
def restore_state_if_checkpoint_exists(self, model):
|
||||
# do nothing if there's not dir or callback
|
||||
no_ckpt_callback = self.checkpoint_callback is None
|
||||
if no_ckpt_callback or not os.path.exists(self.checkpoint_callback.filepath):
|
||||
return
|
||||
|
||||
# restore trainer state and model if there is a weight for this experiment
|
||||
last_epoch = -1
|
||||
last_ckpt_name = None
|
||||
|
||||
# find last epoch
|
||||
checkpoints = os.listdir(self.checkpoint_callback.filepath)
|
||||
for name in checkpoints:
|
||||
# ignore hpc ckpts
|
||||
if 'hpc_' in name:
|
||||
continue
|
||||
|
||||
if '.ckpt' in name:
|
||||
epoch = name.split('epoch_')[1]
|
||||
epoch = int(re.sub('[^0-9]', '', epoch))
|
||||
|
||||
if epoch > last_epoch:
|
||||
last_epoch = epoch
|
||||
last_ckpt_name = name
|
||||
|
||||
# restore last checkpoint
|
||||
if last_ckpt_name is not None:
|
||||
last_ckpt_path = os.path.join(self.checkpoint_callback.filepath, last_ckpt_name)
|
||||
self.restore(last_ckpt_path, self.on_gpu)
|
||||
print(f'model and trainer restored from checkpoint: {last_ckpt_path}')
|
||||
|
||||
# --------------------
|
||||
# HPC SIGNAL HANDLING
|
||||
# --------------------
|
||||
def register_slurm_signal_handlers(self):
|
||||
# see if we're using slurm (not interactive)
|
||||
on_slurm = False
|
||||
try:
|
||||
job_name = os.environ['SLURM_JOB_NAME']
|
||||
if job_name != 'bash':
|
||||
on_slurm = True
|
||||
except Exception as e:
|
||||
pass
|
||||
|
||||
if on_slurm:
|
||||
print('set slurm handle signals')
|
||||
signal.signal(signal.SIGUSR1, self.sig_handler)
|
||||
signal.signal(signal.SIGTERM, self.term_handler)
|
||||
|
||||
def sig_handler(self, signum, frame):
|
||||
if self.proc_rank == 0:
|
||||
# save weights
|
||||
print('handling SIGUSR1')
|
||||
self.hpc_save(self.weights_save_path, self.experiment)
|
||||
|
||||
# find job id
|
||||
job_id = os.environ['SLURM_JOB_ID']
|
||||
cmd = 'scontrol requeue {}'.format(job_id)
|
||||
|
||||
# requeue job
|
||||
print('\nrequeing job {}...'.format(job_id))
|
||||
result = call(cmd, shell=True)
|
||||
|
||||
# print result text
|
||||
if result == 0:
|
||||
print('requeued exp ', job_id)
|
||||
else:
|
||||
print('requeue failed...')
|
||||
|
||||
# close experiment to avoid issues
|
||||
self.experiment.close()
|
||||
|
||||
def term_handler(self, signum, frame):
|
||||
# save
|
||||
print("bypassing sigterm")
|
||||
|
||||
# --------------------
|
||||
# MODEL SAVE CHECKPOINT
|
||||
# --------------------
|
||||
def save_checkpoint(self, filepath):
|
||||
checkpoint = self.dump_checkpoint()
|
||||
|
||||
# do the actual save
|
||||
torch.save(checkpoint, filepath)
|
||||
|
||||
def restore(self, checkpoint_path, on_gpu):
|
||||
|
||||
# if on_gpu:
|
||||
# checkpoint = torch.load(checkpoint_path)
|
||||
# else:
|
||||
# load on CPU first
|
||||
checkpoint = torch.load(checkpoint_path, map_location=lambda storage, loc: storage)
|
||||
|
||||
# load model state
|
||||
model = self.__get_model()
|
||||
|
||||
# load the state_dict on the model automatically
|
||||
model.load_state_dict(checkpoint['state_dict'])
|
||||
if on_gpu:
|
||||
model.cuda(self.root_gpu)
|
||||
|
||||
# load training state (affects trainer only)
|
||||
self.restore_training_state(checkpoint)
|
||||
|
||||
def dump_checkpoint(self):
|
||||
|
||||
checkpoint = {
|
||||
'epoch': self.current_epoch,
|
||||
'global_step': self.global_step
|
||||
}
|
||||
|
||||
if self.checkpoint_callback is not None:
|
||||
checkpoint['checkpoint_callback_best'] = self.checkpoint_callback.best
|
||||
|
||||
if self.early_stop_callback is not None:
|
||||
checkpoint['early_stop_callback_wait'] = self.early_stop_callback.wait
|
||||
checkpoint['early_stop_callback_patience'] = self.early_stop_callback.patience
|
||||
|
||||
# save optimizers
|
||||
optimizer_states = []
|
||||
for i, optimizer in enumerate(self.optimizers):
|
||||
optimizer_states.append(optimizer.state_dict())
|
||||
|
||||
checkpoint['optimizer_states'] = optimizer_states
|
||||
|
||||
# save lr schedulers
|
||||
lr_schedulers = []
|
||||
for i, scheduler in enumerate(self.lr_schedulers):
|
||||
lr_schedulers.append(scheduler.state_dict())
|
||||
|
||||
checkpoint['lr_schedulers'] = lr_schedulers
|
||||
|
||||
# add the state_dict from the model
|
||||
model = self.__get_model()
|
||||
checkpoint['state_dict'] = model.state_dict()
|
||||
|
||||
# give the model a chance to add a few things
|
||||
model.on_save_checkpoint(checkpoint)
|
||||
|
||||
return checkpoint
|
||||
|
||||
# --------------------
|
||||
# HPC IO
|
||||
# --------------------
|
||||
def restore_hpc_weights_if_needed(self, model):
|
||||
"""
|
||||
If there is a set of hpc weights, use as signal to restore model
|
||||
:param model:
|
||||
:return:
|
||||
"""
|
||||
# look for hpc weights
|
||||
folderpath = self.weights_save_path
|
||||
if os.path.exists(folderpath):
|
||||
files = os.listdir(folderpath)
|
||||
hpc_weight_paths = [x for x in files if 'hpc_ckpt' in x]
|
||||
|
||||
# if hpc weights exist restore model
|
||||
if len(hpc_weight_paths) > 0:
|
||||
self.hpc_load(folderpath, self.on_gpu)
|
||||
|
||||
def restore_training_state(self, checkpoint):
|
||||
"""
|
||||
Restore trainer state.
|
||||
Model will get its change to update
|
||||
:param checkpoint:
|
||||
:return:
|
||||
"""
|
||||
if self.checkpoint_callback is not None:
|
||||
self.checkpoint_callback.best = checkpoint['checkpoint_callback_best']
|
||||
|
||||
if self.early_stop_callback is not None:
|
||||
self.early_stop_callback.wait = checkpoint['early_stop_callback_wait']
|
||||
self.early_stop_callback.patience = checkpoint['early_stop_callback_patience']
|
||||
|
||||
self.global_step = checkpoint['global_step']
|
||||
self.current_epoch = checkpoint['epoch']
|
||||
|
||||
# restore the optimizers
|
||||
optimizer_states = checkpoint['optimizer_states']
|
||||
for optimizer, opt_state in zip(self.optimizers, optimizer_states):
|
||||
optimizer.load_state_dict(opt_state)
|
||||
|
||||
# move optimizer to GPU 1 weight at a time
|
||||
# avoids OOM
|
||||
if self.root_gpu is not None:
|
||||
for state in optimizer.state.values():
|
||||
for k, v in state.items():
|
||||
if isinstance(v, torch.Tensor):
|
||||
state[k] = v.cuda(self.root_gpu)
|
||||
|
||||
# restore the lr schedulers
|
||||
lr_schedulers = checkpoint['lr_schedulers']
|
||||
for scheduler, lrs_state in zip(self.lr_schedulers, lr_schedulers):
|
||||
scheduler.load_state_dict(lrs_state)
|
||||
|
||||
# ----------------------------------
|
||||
# PRIVATE OPS
|
||||
# ----------------------------------
|
||||
def hpc_save(self, folderpath, experiment):
|
||||
# make sure the checkpoint folder exists
|
||||
os.makedirs(folderpath, exist_ok=True)
|
||||
|
||||
# save exp to make sure we get all the metrics
|
||||
experiment.save()
|
||||
|
||||
ckpt_number = self.max_ckpt_in_folder(folderpath) + 1
|
||||
|
||||
if not os.path.exists(folderpath):
|
||||
os.makedirs(folderpath, exist_ok=True)
|
||||
filepath = '{}/hpc_ckpt_{}.ckpt'.format(folderpath, ckpt_number)
|
||||
|
||||
# give model a chance to do something on hpc_save
|
||||
model = self.__get_model()
|
||||
checkpoint = self.dump_checkpoint()
|
||||
|
||||
model.on_hpc_save(checkpoint)
|
||||
|
||||
# do the actual save
|
||||
torch.save(checkpoint, filepath)
|
||||
|
||||
return filepath
|
||||
|
||||
def hpc_load(self, folderpath, on_gpu):
|
||||
filepath = '{}/hpc_ckpt_{}.ckpt'.format(folderpath, self.max_ckpt_in_folder(folderpath))
|
||||
|
||||
# load on CPU first
|
||||
checkpoint = torch.load(filepath, map_location=lambda storage, loc: storage)
|
||||
|
||||
# load model state
|
||||
model = self.__get_model()
|
||||
|
||||
# load the state_dict on the model automatically
|
||||
model.load_state_dict(checkpoint['state_dict'])
|
||||
|
||||
if self.root_gpu is not None:
|
||||
model.cuda(self.root_gpu)
|
||||
|
||||
# load training state (affects trainer only)
|
||||
self.restore_training_state(checkpoint)
|
||||
|
||||
# call model hook
|
||||
model.on_hpc_load(checkpoint)
|
||||
|
||||
print(f'restored hpc model from: {filepath}')
|
||||
|
||||
def max_ckpt_in_folder(self, path, name_key='ckpt_'):
|
||||
files = os.listdir(path)
|
||||
files = [x for x in files if name_key in x]
|
||||
if len(files) == 0:
|
||||
return 0
|
||||
|
||||
ckpt_vs = []
|
||||
for name in files:
|
||||
name = name.split(name_key)[-1]
|
||||
name = re.sub('[^0-9]', '', name)
|
||||
ckpt_vs.append(int(name))
|
||||
|
||||
return max(ckpt_vs)
|
||||
|
||||
|
||||
def load_hparams_from_tags_csv(tags_csv):
|
||||
from argparse import Namespace
|
||||
import pandas as pd
|
||||
|
||||
tags_df = pd.read_csv(tags_csv)
|
||||
dic = tags_df.to_dict(orient='records')
|
||||
|
||||
ns_dict = {row['key']: convert(row['value']) for row in dic}
|
||||
|
||||
ns = Namespace(**ns_dict)
|
||||
return ns
|
||||
|
||||
|
||||
def convert(val):
|
||||
constructors = [int, float, str]
|
||||
|
||||
if type(val) is str:
|
||||
if val.lower() == 'true':
|
||||
return True
|
||||
if val.lower() == 'false':
|
||||
return False
|
||||
|
||||
for c in constructors:
|
||||
try:
|
||||
return c(val)
|
||||
except ValueError:
|
||||
pass
|
||||
return val
|
||||
@@ -45,6 +45,7 @@ omit =
|
||||
tests/test_models.py
|
||||
pytorch_lightning/testing_models/lm_test_module.py
|
||||
pytorch_lightning/utilities/arg_parse.py
|
||||
examples/templates
|
||||
|
||||
[flake8]
|
||||
ignore = E731,W504,F401,F841
|
||||
|
||||
@@ -14,7 +14,7 @@ from setuptools import setup, find_packages
|
||||
# engineer specific practices
|
||||
setup(
|
||||
name='pytorch-lightning',
|
||||
version='0.4.5',
|
||||
version='0.4.9',
|
||||
description='The Keras for ML researchers using PyTorch',
|
||||
author='William Falcon',
|
||||
author_email='waf2107@columbia.edu',
|
||||
@@ -30,7 +30,7 @@ setup(
|
||||
python_requires='>=3.6',
|
||||
install_requires=[
|
||||
'torch==1.2.0',
|
||||
'tqdm',
|
||||
'tqdm>=4.35.0',
|
||||
'test-tube>=0.6.9',
|
||||
'pandas>=0.20.3',
|
||||
],
|
||||
|
||||
+143
-22
@@ -1,5 +1,6 @@
|
||||
from pytorch_lightning import Trainer
|
||||
from examples import LightningTemplateModel
|
||||
from pytorch_lightning.testing import LightningTestModel
|
||||
from argparse import Namespace
|
||||
from test_tube import Experiment
|
||||
from pytorch_lightning.callbacks import ModelCheckpoint
|
||||
@@ -11,6 +12,8 @@ import torch
|
||||
from torch.nn import functional as F
|
||||
from torch.utils.data import DataLoader
|
||||
from torchvision.datasets import MNIST
|
||||
import numpy as np
|
||||
import pdb
|
||||
|
||||
|
||||
class CoolModel(pl.LightningModule):
|
||||
@@ -72,10 +75,11 @@ def get_model():
|
||||
return model, hparams
|
||||
|
||||
|
||||
def get_exp(debug=True):
|
||||
def get_exp(debug=True, version=None):
|
||||
# set up exp object without actually saving logs
|
||||
root_dir = os.path.dirname(os.path.realpath(__file__))
|
||||
exp = Experiment(debug=debug, save_dir=root_dir, name='tests_tt_dir')
|
||||
save_dir = os.path.join(root_dir, 'save_dir')
|
||||
exp = Experiment(debug=debug, save_dir=save_dir, name='tests_tt_dir', version=version)
|
||||
return exp
|
||||
|
||||
|
||||
@@ -98,7 +102,7 @@ def clear_save_dir():
|
||||
shutil.rmtree(save_dir)
|
||||
|
||||
|
||||
def load_model(exp, save_dir):
|
||||
def load_model(exp, save_dir, on_gpu, map_location=None, module_class=LightningTemplateModel):
|
||||
|
||||
# load trained model
|
||||
tags_path = exp.get_data_path(exp.name, exp.version)
|
||||
@@ -107,8 +111,10 @@ def load_model(exp, save_dir):
|
||||
checkpoints = [x for x in os.listdir(save_dir) if '.ckpt' in x]
|
||||
weights_dir = os.path.join(save_dir, checkpoints[0])
|
||||
|
||||
trained_model = LightningTemplateModel.load_from_metrics(weights_path=weights_dir,
|
||||
tags_csv=tags_path, on_gpu=True)
|
||||
trained_model = module_class.load_from_metrics(weights_path=weights_dir,
|
||||
tags_csv=tags_path,
|
||||
on_gpu=on_gpu,
|
||||
map_location=map_location)
|
||||
|
||||
assert trained_model is not None, 'loading model failed'
|
||||
|
||||
@@ -130,45 +136,160 @@ def run_prediction(dataloader, trained_model):
|
||||
val_acc = torch.sum(y == labels_hat).item() / (len(y) * 1.0)
|
||||
val_acc = torch.tensor(val_acc)
|
||||
val_acc = val_acc.item()
|
||||
|
||||
print(val_acc)
|
||||
|
||||
assert val_acc > 0.70, 'this model is expected to get > 0.7 in test set (it got %f)' % val_acc
|
||||
|
||||
|
||||
def main():
|
||||
|
||||
# ------------------------------------------------------------------------
|
||||
def run_gpu_model_test(trainer_options, model, hparams, on_gpu=True):
|
||||
save_dir = init_save_dir()
|
||||
|
||||
# exp file to get meta
|
||||
exp = get_exp(False)
|
||||
exp.argparse(hparams)
|
||||
exp.save()
|
||||
|
||||
# exp file to get weights
|
||||
checkpoint = ModelCheckpoint(save_dir)
|
||||
|
||||
trainer = Trainer(
|
||||
experiment=exp,
|
||||
checkpoint_callback=checkpoint,
|
||||
progress_bar=True,
|
||||
max_nb_epochs=1,
|
||||
gpus=[0, 1],
|
||||
distributed_backend='dp',
|
||||
)
|
||||
|
||||
model = CoolModel()
|
||||
# add these to the trainer options
|
||||
trainer_options['checkpoint_callback'] = checkpoint
|
||||
trainer_options['experiment'] = exp
|
||||
|
||||
# fit model
|
||||
trainer = Trainer(**trainer_options)
|
||||
result = trainer.fit(model)
|
||||
|
||||
# correct result and ok accuracy
|
||||
assert result == 1, 'amp + ddp model failed to complete'
|
||||
|
||||
# test model loading
|
||||
pretrained_model = load_model(exp, save_dir)
|
||||
pretrained_model = load_model(exp, save_dir, on_gpu)
|
||||
|
||||
# test model preds
|
||||
# test new model accuracy
|
||||
run_prediction(model.test_dataloader, pretrained_model)
|
||||
|
||||
if trainer.use_ddp:
|
||||
# on hpc this would work fine... but need to hack it for the purpose of the test
|
||||
trainer.model = pretrained_model
|
||||
trainer.optimizers, trainer.lr_schedulers = pretrained_model.configure_optimizers()
|
||||
|
||||
# test HPC loading / saving
|
||||
trainer.hpc_save(save_dir, exp)
|
||||
trainer.hpc_load(save_dir, on_gpu=on_gpu)
|
||||
|
||||
clear_save_dir()
|
||||
|
||||
|
||||
def assert_ok_val_acc(trainer):
|
||||
# this model should get 0.80+ acc
|
||||
acc = trainer.tng_tqdm_dic['val_acc']
|
||||
assert acc > 0.50, f'model failed to get expected 0.50 validation accuracy. Got: {acc}'
|
||||
|
||||
|
||||
def assert_ok_test_acc(trainer):
|
||||
# this model should get 0.80+ acc
|
||||
acc = trainer.tng_tqdm_dic['test_acc']
|
||||
assert acc > 0.50, f'model failed to get expected 0.50 validation accuracy. Got: {acc}'
|
||||
|
||||
|
||||
def get_hparams(continue_training=False, hpc_exp_number=0):
|
||||
root_dir = os.path.dirname(os.path.realpath(__file__))
|
||||
|
||||
args = {
|
||||
'drop_prob': 0.2,
|
||||
'batch_size': 32,
|
||||
'in_features': 28 * 28,
|
||||
'learning_rate': 0.001 * 8,
|
||||
'optimizer_name': 'adam',
|
||||
'data_root': os.path.join(root_dir, 'mnist'),
|
||||
'out_features': 10,
|
||||
'hidden_dim': 1000}
|
||||
|
||||
if continue_training:
|
||||
args['test_tube_do_checkpoint_load'] = True
|
||||
args['hpc_exp_number'] = hpc_exp_number
|
||||
|
||||
hparams = Namespace(**args)
|
||||
return hparams
|
||||
|
||||
|
||||
def main():
|
||||
"""
|
||||
Make sure DDP + AMP continue training correctly
|
||||
:return:
|
||||
"""
|
||||
hparams = get_hparams()
|
||||
model = LightningTestModel(hparams)
|
||||
|
||||
trainer_options = dict(
|
||||
show_progress_bar=True,
|
||||
max_nb_epochs=4,
|
||||
gpus=2,
|
||||
distributed_backend='dp',
|
||||
)
|
||||
|
||||
save_dir = init_save_dir()
|
||||
|
||||
# exp file to get meta
|
||||
exp = get_exp(False)
|
||||
exp.argparse(hparams)
|
||||
exp.save()
|
||||
|
||||
# exp file to get weights
|
||||
checkpoint = ModelCheckpoint(save_dir)
|
||||
|
||||
# add these to the trainer options
|
||||
trainer_options['experiment'] = exp
|
||||
trainer_options['checkpoint_callback'] = checkpoint
|
||||
|
||||
# fit model
|
||||
trainer = Trainer(**trainer_options)
|
||||
trainer.is_slurm_managing_tasks = True
|
||||
result = trainer.fit(model)
|
||||
|
||||
# track epoch before saving
|
||||
real_global_epoch = trainer.current_epoch
|
||||
|
||||
# correct result and ok accuracy
|
||||
assert result == 1, 'amp + dp model failed to complete'
|
||||
|
||||
# ---------------------------
|
||||
# HPC LOAD/SAVE
|
||||
# ---------------------------
|
||||
# save
|
||||
trainer.hpc_save(save_dir, exp)
|
||||
|
||||
# init new trainer
|
||||
new_exp = get_exp(False, version=exp.version)
|
||||
trainer_options['experiment'] = new_exp
|
||||
trainer_options['checkpoint_callback'] = ModelCheckpoint(save_dir)
|
||||
trainer_options['train_percent_check'] = 0.2
|
||||
trainer_options['val_percent_check'] = 0.2
|
||||
trainer_options['max_nb_epochs'] = 1
|
||||
new_trainer = Trainer(**trainer_options)
|
||||
|
||||
# set the epoch start hook so we can predict before the model does the full training
|
||||
def assert_good_acc():
|
||||
assert trainer.current_epoch == real_global_epoch and trainer.current_epoch > 0
|
||||
|
||||
# if model and state loaded correctly, predictions will be good even though we
|
||||
# haven't trained with the new loaded model
|
||||
dp_model = new_trainer.model
|
||||
dp_model.eval()
|
||||
|
||||
_ = [run_prediction(dataloader, dp_model, dp=True) for dataloader in trainer.val_dataloader]
|
||||
|
||||
# new model
|
||||
model = LightningTestModel(hparams)
|
||||
model.on_sanity_check_start = assert_good_acc
|
||||
|
||||
# fit new model which should load hpc weights
|
||||
new_trainer.fit(model)
|
||||
|
||||
# test freeze on gpu
|
||||
model.freeze()
|
||||
model.unfreeze()
|
||||
|
||||
clear_save_dir()
|
||||
|
||||
|
||||
|
||||
+655
-123
File diff suppressed because it is too large
Load Diff
@@ -34,11 +34,11 @@ deps =
|
||||
commands =
|
||||
check-manifest --ignore tox.ini
|
||||
python setup.py check -m -s
|
||||
coverage run --source pytorch_lightning -m py.test pytorch_lightning tests examples -v --doctest-modules
|
||||
flake8 .
|
||||
coverage run --source pytorch_lightning -m py.test pytorch_lightning tests examples -v --doctest-modules
|
||||
|
||||
[flake8]
|
||||
exclude = .tox,*.egg,build,temp
|
||||
exclude = .tox,*.egg,build,temp,examples/*
|
||||
select = E,W,F
|
||||
doctests = True
|
||||
verbose = 2
|
||||
|
||||
Reference in New Issue
Block a user