mirror of
https://github.com/wassname/pytorch-transformer-ts.git
synced 2026-08-11 11:24:32 +08:00
added informer
This commit is contained in:
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from .estimator import InformerEstimator
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from .lightning_module import InformerLightningModule
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from .module import InformerModel
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__all__ = [
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"InformerModel",
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"InformerLightningModule",
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"InformerEstimator",
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]
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@@ -0,0 +1,319 @@
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from typing import Any, Dict, Iterable, List, Optional
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import torch
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from gluonts.core.component import validated
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from gluonts.dataset.common import Dataset
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from gluonts.dataset.field_names import FieldName
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from gluonts.itertools import Cyclic, IterableSlice, PseudoShuffled
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from gluonts.time_feature import TimeFeature, time_features_from_frequency_str
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from gluonts.torch.model.estimator import PyTorchLightningEstimator
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from gluonts.torch.model.predictor import PyTorchPredictor
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from gluonts.torch.modules.distribution_output import DistributionOutput, StudentTOutput
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from gluonts.torch.modules.loss import DistributionLoss, NegativeLogLikelihood
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from gluonts.torch.util import IterableDataset
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from gluonts.transform import (
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AddAgeFeature,
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AddObservedValuesIndicator,
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AddTimeFeatures,
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AsNumpyArray,
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Chain,
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ExpectedNumInstanceSampler,
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InstanceSplitter,
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RemoveFields,
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SelectFields,
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SetField,
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TestSplitSampler,
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Transformation,
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ValidationSplitSampler,
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VstackFeatures,
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)
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from gluonts.transform.sampler import InstanceSampler
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from torch.utils.data import DataLoader
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from lightning_module import InformerLightningModule
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from module import InformerModel
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PREDICTION_INPUT_NAMES = [
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"feat_static_cat",
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"feat_static_real",
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"past_time_feat",
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"past_target",
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"past_observed_values",
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"future_time_feat",
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]
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TRAINING_INPUT_NAMES = PREDICTION_INPUT_NAMES + [
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"future_target",
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"future_observed_values",
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]
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class InformerEstimator(PyTorchLightningEstimator):
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@validated()
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def __init__(
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self,
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freq: str,
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prediction_length: int,
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# Informer arguments
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nhead: int,
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num_encoder_layers: int,
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num_decoder_layers: int,
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dim_feedforward: int,
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input_size: int = 1,
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activation: str = "gelu",
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dropout: float = 0.1,
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attn: str = "prob",
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factor: int = 5,
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distil: bool = True,
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context_length: Optional[int] = None,
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num_feat_dynamic_real: int = 0,
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num_feat_static_cat: int = 0,
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num_feat_static_real: int = 0,
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cardinality: Optional[List[int]] = None,
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embedding_dimension: Optional[List[int]] = None,
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distr_output: DistributionOutput = StudentTOutput(),
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loss: DistributionLoss = NegativeLogLikelihood(),
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scaling: bool = True,
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lags_seq: Optional[List[int]] = None,
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time_features: Optional[List[TimeFeature]] = None,
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num_parallel_samples: int = 100,
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batch_size: int = 32,
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num_batches_per_epoch: int = 50,
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trainer_kwargs: Optional[Dict[str, Any]] = dict(),
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train_sampler: Optional[InstanceSampler] = None,
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validation_sampler: Optional[InstanceSampler] = None,
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) -> None:
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trainer_kwargs = {
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"max_epochs": 100,
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**trainer_kwargs,
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}
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super().__init__(trainer_kwargs=trainer_kwargs)
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self.freq = freq
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self.context_length = (
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context_length if context_length is not None else prediction_length
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)
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self.prediction_length = prediction_length
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self.distr_output = distr_output
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self.loss = loss
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self.input_size = input_size
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self.nhead = nhead
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self.num_encoder_layers = num_encoder_layers
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self.num_decoder_layers = num_decoder_layers
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self.activation = activation
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self.dim_feedforward = dim_feedforward
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self.dropout = dropout
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self.attn = attn
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self.factor = factor
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self.distil = distil
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self.num_feat_dynamic_real = num_feat_dynamic_real
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self.num_feat_static_cat = num_feat_static_cat
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self.num_feat_static_real = num_feat_static_real
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self.cardinality = (
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cardinality if cardinality and num_feat_static_cat > 0 else [1]
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)
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self.embedding_dimension = embedding_dimension
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self.scaling = scaling
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self.lags_seq = lags_seq
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self.time_features = (
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time_features
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if time_features is not None
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else time_features_from_frequency_str(self.freq)
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)
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self.num_parallel_samples = num_parallel_samples
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self.batch_size = batch_size
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self.num_batches_per_epoch = num_batches_per_epoch
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self.train_sampler = train_sampler or ExpectedNumInstanceSampler(
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num_instances=1.0, min_future=prediction_length
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)
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self.validation_sampler = validation_sampler or ValidationSplitSampler(
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min_future=prediction_length
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)
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def create_transformation(self) -> Transformation:
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remove_field_names = []
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if self.num_feat_static_real == 0:
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remove_field_names.append(FieldName.FEAT_STATIC_REAL)
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if self.num_feat_dynamic_real == 0:
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remove_field_names.append(FieldName.FEAT_DYNAMIC_REAL)
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return Chain(
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[RemoveFields(field_names=remove_field_names)]
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+ (
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[SetField(output_field=FieldName.FEAT_STATIC_CAT, value=[0])]
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if not self.num_feat_static_cat > 0
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else []
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)
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+ (
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[SetField(output_field=FieldName.FEAT_STATIC_REAL, value=[0.0])]
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if not self.num_feat_static_real > 0
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else []
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)
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+ [
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AsNumpyArray(
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field=FieldName.FEAT_STATIC_CAT,
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expected_ndim=1,
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dtype=int,
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),
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AsNumpyArray(
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field=FieldName.FEAT_STATIC_REAL,
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expected_ndim=1,
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),
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AsNumpyArray(
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field=FieldName.TARGET,
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# in the following line, we add 1 for the time dimension
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expected_ndim=1 + len(self.distr_output.event_shape),
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),
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AddObservedValuesIndicator(
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target_field=FieldName.TARGET,
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output_field=FieldName.OBSERVED_VALUES,
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),
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AddTimeFeatures(
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start_field=FieldName.START,
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target_field=FieldName.TARGET,
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output_field=FieldName.FEAT_TIME,
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time_features=self.time_features,
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pred_length=self.prediction_length,
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),
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AddAgeFeature(
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target_field=FieldName.TARGET,
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output_field=FieldName.FEAT_AGE,
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pred_length=self.prediction_length,
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log_scale=True,
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),
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VstackFeatures(
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output_field=FieldName.FEAT_TIME,
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input_fields=[FieldName.FEAT_TIME, FieldName.FEAT_AGE]
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+ (
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[FieldName.FEAT_DYNAMIC_REAL]
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if self.num_feat_dynamic_real > 0
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else []
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),
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),
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]
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)
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def _create_instance_splitter(self, module: InformerLightningModule, mode: str):
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assert mode in ["training", "validation", "test"]
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instance_sampler = {
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"training": self.train_sampler,
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"validation": self.validation_sampler,
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"test": TestSplitSampler(),
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}[mode]
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return InstanceSplitter(
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target_field=FieldName.TARGET,
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is_pad_field=FieldName.IS_PAD,
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start_field=FieldName.START,
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forecast_start_field=FieldName.FORECAST_START,
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instance_sampler=instance_sampler,
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past_length=module.model._past_length,
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future_length=self.prediction_length,
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time_series_fields=[
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FieldName.FEAT_TIME,
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FieldName.OBSERVED_VALUES,
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],
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dummy_value=self.distr_output.value_in_support,
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)
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def create_training_data_loader(
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self,
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data: Dataset,
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module: InformerLightningModule,
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shuffle_buffer_length: Optional[int] = None,
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**kwargs,
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) -> Iterable:
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transformation = self._create_instance_splitter(
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module, "training"
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) + SelectFields(TRAINING_INPUT_NAMES)
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training_instances = transformation.apply(
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Cyclic(data)
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if shuffle_buffer_length is None
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else PseudoShuffled(
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Cyclic(data), shuffle_buffer_length=shuffle_buffer_length
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)
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)
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return IterableSlice(
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iter(
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DataLoader(
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IterableDataset(training_instances),
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batch_size=self.batch_size,
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**kwargs,
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)
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),
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self.num_batches_per_epoch,
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)
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def create_validation_data_loader(
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self,
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data: Dataset,
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module: InformerLightningModule,
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**kwargs,
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) -> Iterable:
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transformation = self._create_instance_splitter(
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module, "validation"
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) + SelectFields(TRAINING_INPUT_NAMES)
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validation_instances = transformation.apply(data)
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return DataLoader(
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IterableDataset(validation_instances),
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batch_size=self.batch_size,
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**kwargs,
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)
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def create_predictor(
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self,
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transformation: Transformation,
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module: InformerLightningModule,
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) -> PyTorchPredictor:
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prediction_splitter = self._create_instance_splitter(module, "test")
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return PyTorchPredictor(
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input_transform=transformation + prediction_splitter,
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input_names=PREDICTION_INPUT_NAMES,
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prediction_net=module.model,
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batch_size=self.batch_size,
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freq=self.freq,
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prediction_length=self.prediction_length,
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device=torch.device("cuda" if torch.cuda.is_available() else "cpu"),
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)
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def create_lightning_module(self) -> InformerLightningModule:
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model = InformerModel(
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freq=self.freq,
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context_length=self.context_length,
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prediction_length=self.prediction_length,
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num_feat_dynamic_real=1
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+ self.num_feat_dynamic_real
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+ len(self.time_features),
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num_feat_static_real=max(1, self.num_feat_static_real),
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num_feat_static_cat=max(1, self.num_feat_static_cat),
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cardinality=self.cardinality,
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embedding_dimension=self.embedding_dimension,
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# Informer arguments
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nhead=self.nhead,
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num_encoder_layers=self.num_encoder_layers,
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num_decoder_layers=self.num_decoder_layers,
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activation=self.activation,
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dropout=self.dropout,
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dim_feedforward=self.dim_feedforward,
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attn=self.attn,
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factor=self.factor,
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distil=self.distil,
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# univariate input
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input_size=self.input_size,
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distr_output=self.distr_output,
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lags_seq=self.lags_seq,
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scaling=self.scaling,
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num_parallel_samples=self.num_parallel_samples,
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)
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return InformerLightningModule(model=model, loss=self.loss)
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File diff suppressed because one or more lines are too long
@@ -0,0 +1,80 @@
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import pytorch_lightning as pl
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import torch
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from gluonts.torch.modules.loss import DistributionLoss, NegativeLogLikelihood
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from gluonts.torch.util import weighted_average
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from module import InformerModel
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class InformerLightningModule(pl.LightningModule):
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def __init__(
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self,
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model: InformerModel,
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loss: DistributionLoss = NegativeLogLikelihood(),
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lr: float = 1e-3,
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weight_decay: float = 1e-8,
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) -> None:
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super().__init__()
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self.save_hyperparameters()
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self.model = model
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self.loss = loss
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self.lr = lr
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self.weight_decay = weight_decay
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def training_step(self, batch, batch_idx: int):
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"""Execute training step"""
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train_loss = self(batch)
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self.log(
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"train_loss",
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train_loss,
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on_epoch=True,
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on_step=False,
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prog_bar=True,
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)
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return train_loss
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def validation_step(self, batch, batch_idx: int):
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"""Execute validation step"""
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with torch.inference_mode():
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val_loss = self(batch)
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self.log("val_loss", val_loss, on_epoch=True, on_step=False, prog_bar=True)
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return val_loss
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|
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def configure_optimizers(self):
|
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"""Returns the optimizer to use"""
|
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return torch.optim.Adam(
|
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self.model.parameters(),
|
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lr=self.lr,
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weight_decay=self.weight_decay,
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)
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def forward(self, batch):
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feat_static_cat = batch["feat_static_cat"]
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feat_static_real = batch["feat_static_real"]
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past_time_feat = batch["past_time_feat"]
|
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past_target = batch["past_target"]
|
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future_time_feat = batch["future_time_feat"]
|
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future_target = batch["future_target"]
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past_observed_values = batch["past_observed_values"]
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future_observed_values = batch["future_observed_values"]
|
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transformer_inputs, scale, _ = self.model.create_network_inputs(
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feat_static_cat,
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feat_static_real,
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past_time_feat,
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past_target,
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past_observed_values,
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future_time_feat,
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future_target,
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)
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params = self.model.output_params(transformer_inputs)
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distr = self.model.output_distribution(params, scale)
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loss_values = self.loss(distr, future_target)
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|
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if len(self.model.target_shape) == 0:
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loss_weights = future_observed_values
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else:
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loss_weights = future_observed_values.min(dim=-1, keepdim=False)
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|
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return weighted_average(loss_values, weights=loss_weights)
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@@ -0,0 +1,721 @@
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from math import sqrt
|
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from typing import List, Optional
|
||||
|
||||
import numpy as np
|
||||
import torch
|
||||
import torch.nn as nn
|
||||
import torch.nn.functional as F
|
||||
from gluonts.core.component import validated
|
||||
from gluonts.time_feature import get_lags_for_frequency
|
||||
from gluonts.torch.modules.distribution_output import DistributionOutput, StudentTOutput
|
||||
from gluonts.torch.modules.feature import FeatureEmbedder
|
||||
from gluonts.torch.modules.scaler import MeanScaler, NOPScaler
|
||||
|
||||
|
||||
class TriangularCausalMask:
|
||||
def __init__(self, B, L, device="cpu"):
|
||||
mask_shape = [B, 1, L, L]
|
||||
with torch.no_grad():
|
||||
self._mask = torch.triu(
|
||||
torch.ones(mask_shape, dtype=torch.bool), diagonal=1
|
||||
).to(device)
|
||||
|
||||
@property
|
||||
def mask(self):
|
||||
return self._mask
|
||||
|
||||
|
||||
class ProbMask:
|
||||
def __init__(self, B, H, L, index, scores, device="cpu"):
|
||||
_mask = torch.ones(L, scores.shape[-1], dtype=torch.bool).to(device).triu(1)
|
||||
_mask_ex = _mask[None, None, :].expand(B, H, L, scores.shape[-1])
|
||||
indicator = _mask_ex[
|
||||
torch.arange(B)[:, None, None], torch.arange(H)[None, :, None], index, :
|
||||
].to(device)
|
||||
self._mask = indicator.view(scores.shape).to(device)
|
||||
|
||||
@property
|
||||
def mask(self):
|
||||
return self._mask
|
||||
|
||||
|
||||
class FullAttention(nn.Module):
|
||||
def __init__(
|
||||
self,
|
||||
mask_flag=True,
|
||||
factor=5,
|
||||
scale=None,
|
||||
attention_dropout=0.1,
|
||||
output_attention=False,
|
||||
):
|
||||
super(FullAttention, self).__init__()
|
||||
self.scale = scale
|
||||
self.mask_flag = mask_flag
|
||||
self.output_attention = output_attention
|
||||
self.dropout = nn.Dropout(attention_dropout)
|
||||
|
||||
def forward(self, queries, keys, values, attn_mask):
|
||||
B, L, H, E = queries.shape
|
||||
_, S, _, D = values.shape
|
||||
scale = self.scale or 1.0 / sqrt(E)
|
||||
|
||||
scores = torch.einsum("blhe,bshe->bhls", queries, keys)
|
||||
if self.mask_flag:
|
||||
if attn_mask is None:
|
||||
attn_mask = TriangularCausalMask(B, L, device=queries.device)
|
||||
|
||||
scores.masked_fill_(attn_mask.mask, -np.inf)
|
||||
|
||||
A = self.dropout(torch.softmax(scale * scores, dim=-1))
|
||||
V = torch.einsum("bhls,bshd->blhd", A, values)
|
||||
|
||||
if self.output_attention:
|
||||
return (V.contiguous(), A)
|
||||
else:
|
||||
return (V.contiguous(), None)
|
||||
|
||||
|
||||
class ProbAttention(nn.Module):
|
||||
def __init__(
|
||||
self,
|
||||
mask_flag=True,
|
||||
factor=5,
|
||||
scale=None,
|
||||
attention_dropout=0.1,
|
||||
output_attention=False,
|
||||
):
|
||||
super(ProbAttention, self).__init__()
|
||||
self.factor = factor
|
||||
self.scale = scale
|
||||
self.mask_flag = mask_flag
|
||||
self.output_attention = output_attention
|
||||
self.dropout = nn.Dropout(attention_dropout)
|
||||
|
||||
def _prob_QK(self, Q, K, sample_k, n_top): # n_top: c*ln(L_q)
|
||||
# Q [B, H, L, D]
|
||||
B, H, L_K, E = K.shape
|
||||
_, _, L_Q, _ = Q.shape
|
||||
|
||||
# calculate the sampled Q_K
|
||||
K_expand = K.unsqueeze(-3).expand(B, H, L_Q, L_K, E)
|
||||
index_sample = torch.randint(
|
||||
L_K, (L_Q, sample_k)
|
||||
) # real U = U_part(factor*ln(L_k))*L_q
|
||||
K_sample = K_expand[:, :, torch.arange(L_Q).unsqueeze(1), index_sample, :]
|
||||
Q_K_sample = torch.matmul(Q.unsqueeze(-2), K_sample.transpose(-2, -1)).squeeze(
|
||||
-2
|
||||
)
|
||||
|
||||
# find the Top_k query with sparisty measurement
|
||||
M = Q_K_sample.max(-1)[0] - torch.div(Q_K_sample.sum(-1), L_K)
|
||||
M_top = M.topk(n_top, sorted=False)[1]
|
||||
|
||||
# use the reduced Q to calculate Q_K
|
||||
Q_reduce = Q[
|
||||
torch.arange(B)[:, None, None], torch.arange(H)[None, :, None], M_top, :
|
||||
] # factor*ln(L_q)
|
||||
Q_K = torch.matmul(Q_reduce, K.transpose(-2, -1)) # factor*ln(L_q)*L_k
|
||||
|
||||
return Q_K, M_top
|
||||
|
||||
def _get_initial_context(self, V, L_Q):
|
||||
B, H, L_V, D = V.shape
|
||||
if not self.mask_flag:
|
||||
# V_sum = V.sum(dim=-2)
|
||||
V_sum = V.mean(dim=-2)
|
||||
contex = V_sum.unsqueeze(-2).expand(B, H, L_Q, V_sum.shape[-1]).clone()
|
||||
else: # use mask
|
||||
assert L_Q == L_V # requires that L_Q == L_V, i.e. for self-attention only
|
||||
contex = V.cumsum(dim=-2)
|
||||
return contex
|
||||
|
||||
def _update_context(self, context_in, V, scores, index, L_Q, attn_mask):
|
||||
B, H, L_V, D = V.shape
|
||||
|
||||
if self.mask_flag:
|
||||
attn_mask = ProbMask(B, H, L_Q, index, scores, device=V.device)
|
||||
scores.masked_fill_(attn_mask.mask, -np.inf)
|
||||
|
||||
attn = torch.softmax(scores, dim=-1) # nn.Softmax(dim=-1)(scores)
|
||||
|
||||
context_in[
|
||||
torch.arange(B)[:, None, None], torch.arange(H)[None, :, None], index, :
|
||||
] = torch.matmul(attn, V).type_as(context_in)
|
||||
if self.output_attention:
|
||||
attns = (torch.ones([B, H, L_V, L_V]) / L_V).type_as(attn).to(attn.device)
|
||||
attns[
|
||||
torch.arange(B)[:, None, None], torch.arange(H)[None, :, None], index, :
|
||||
] = attn
|
||||
return (context_in, attns)
|
||||
else:
|
||||
return (context_in, None)
|
||||
|
||||
def forward(self, queries, keys, values, attn_mask):
|
||||
B, L_Q, H, D = queries.shape
|
||||
_, L_K, _, _ = keys.shape
|
||||
|
||||
queries = queries.transpose(2, 1)
|
||||
keys = keys.transpose(2, 1)
|
||||
values = values.transpose(2, 1)
|
||||
|
||||
U_part = self.factor * np.ceil(np.log(L_K)).astype("int").item() # c*ln(L_k)
|
||||
u = self.factor * np.ceil(np.log(L_Q)).astype("int").item() # c*ln(L_q)
|
||||
|
||||
U_part = U_part if U_part < L_K else L_K
|
||||
u = u if u < L_Q else L_Q
|
||||
|
||||
scores_top, index = self._prob_QK(queries, keys, sample_k=U_part, n_top=u)
|
||||
|
||||
# add scale factor
|
||||
scale = self.scale or 1.0 / sqrt(D)
|
||||
if scale is not None:
|
||||
scores_top = scores_top * scale
|
||||
# get the context
|
||||
context = self._get_initial_context(values, L_Q)
|
||||
# update the context with selected top_k queries
|
||||
context, attn = self._update_context(
|
||||
context, values, scores_top, index, L_Q, attn_mask
|
||||
)
|
||||
|
||||
return context.transpose(2, 1).contiguous(), attn
|
||||
|
||||
|
||||
class AttentionLayer(nn.Module):
|
||||
def __init__(
|
||||
self, attention, d_model, n_heads, d_keys=None, d_values=None, mix=False
|
||||
):
|
||||
super(AttentionLayer, self).__init__()
|
||||
|
||||
d_keys = d_keys or (d_model // n_heads)
|
||||
d_values = d_values or (d_model // n_heads)
|
||||
|
||||
self.inner_attention = attention
|
||||
self.query_projection = nn.Linear(d_model, d_keys * n_heads)
|
||||
self.key_projection = nn.Linear(d_model, d_keys * n_heads)
|
||||
self.value_projection = nn.Linear(d_model, d_values * n_heads)
|
||||
self.out_projection = nn.Linear(d_values * n_heads, d_model)
|
||||
self.n_heads = n_heads
|
||||
self.mix = mix
|
||||
|
||||
def forward(self, queries, keys, values, attn_mask):
|
||||
B, L, _ = queries.shape
|
||||
_, S, _ = keys.shape
|
||||
H = self.n_heads
|
||||
|
||||
queries = self.query_projection(queries).view(B, L, H, -1)
|
||||
keys = self.key_projection(keys).view(B, S, H, -1)
|
||||
values = self.value_projection(values).view(B, S, H, -1)
|
||||
|
||||
out, attn = self.inner_attention(queries, keys, values, attn_mask)
|
||||
if self.mix:
|
||||
out = out.transpose(2, 1).contiguous()
|
||||
out = out.view(B, L, -1)
|
||||
|
||||
return self.out_projection(out), attn
|
||||
|
||||
|
||||
class ConvLayer(nn.Module):
|
||||
def __init__(self, c_in):
|
||||
super(ConvLayer, self).__init__()
|
||||
self.downConv = nn.Conv1d(
|
||||
in_channels=c_in,
|
||||
out_channels=c_in,
|
||||
kernel_size=3,
|
||||
padding=1,
|
||||
padding_mode="circular",
|
||||
)
|
||||
self.norm = nn.BatchNorm1d(c_in)
|
||||
self.activation = nn.ELU()
|
||||
self.maxPool = nn.MaxPool1d(kernel_size=3, stride=2, padding=1)
|
||||
|
||||
def forward(self, x):
|
||||
x = self.downConv(x.permute(0, 2, 1))
|
||||
x = self.norm(x)
|
||||
x = self.activation(x)
|
||||
x = self.maxPool(x)
|
||||
x = x.transpose(1, 2)
|
||||
return x
|
||||
|
||||
|
||||
class EncoderLayer(nn.Module):
|
||||
def __init__(self, attention, d_model, d_ff=None, dropout=0.1, activation="relu"):
|
||||
super(EncoderLayer, self).__init__()
|
||||
d_ff = d_ff or 4 * d_model
|
||||
self.attention = attention
|
||||
self.conv1 = nn.Conv1d(in_channels=d_model, out_channels=d_ff, kernel_size=1)
|
||||
self.conv2 = nn.Conv1d(in_channels=d_ff, out_channels=d_model, kernel_size=1)
|
||||
self.norm1 = nn.LayerNorm(d_model)
|
||||
self.norm2 = nn.LayerNorm(d_model)
|
||||
self.dropout = nn.Dropout(dropout)
|
||||
self.activation = F.relu if activation == "relu" else F.gelu
|
||||
|
||||
def forward(self, x, attn_mask=None):
|
||||
# x [B, L, D]
|
||||
# x = x + self.dropout(self.attention(
|
||||
# x, x, x,
|
||||
# attn_mask = attn_mask
|
||||
# ))
|
||||
new_x, attn = self.attention(x, x, x, attn_mask=attn_mask)
|
||||
x = x + self.dropout(new_x)
|
||||
|
||||
y = x = self.norm1(x)
|
||||
y = self.dropout(self.activation(self.conv1(y.transpose(-1, 1))))
|
||||
y = self.dropout(self.conv2(y).transpose(-1, 1))
|
||||
|
||||
return self.norm2(x + y), attn
|
||||
|
||||
|
||||
class Encoder(nn.Module):
|
||||
def __init__(self, attn_layers, conv_layers=None, norm_layer=None):
|
||||
super(Encoder, self).__init__()
|
||||
self.attn_layers = nn.ModuleList(attn_layers)
|
||||
self.conv_layers = (
|
||||
nn.ModuleList(conv_layers) if conv_layers is not None else None
|
||||
)
|
||||
self.norm = norm_layer
|
||||
|
||||
def forward(self, x, attn_mask=None):
|
||||
# x [B, L, D]
|
||||
attns = []
|
||||
if self.conv_layers is not None:
|
||||
for attn_layer, conv_layer in zip(self.attn_layers, self.conv_layers):
|
||||
x, attn = attn_layer(x, attn_mask=attn_mask)
|
||||
x = conv_layer(x)
|
||||
attns.append(attn)
|
||||
x, attn = self.attn_layers[-1](x, attn_mask=attn_mask)
|
||||
attns.append(attn)
|
||||
else:
|
||||
for attn_layer in self.attn_layers:
|
||||
x, attn = attn_layer(x, attn_mask=attn_mask)
|
||||
attns.append(attn)
|
||||
|
||||
if self.norm is not None:
|
||||
x = self.norm(x)
|
||||
|
||||
return x, attns
|
||||
|
||||
|
||||
class DecoderLayer(nn.Module):
|
||||
def __init__(
|
||||
self,
|
||||
self_attention,
|
||||
cross_attention,
|
||||
d_model,
|
||||
d_ff=None,
|
||||
dropout=0.1,
|
||||
activation="relu",
|
||||
):
|
||||
super(DecoderLayer, self).__init__()
|
||||
d_ff = d_ff or 4 * d_model
|
||||
self.self_attention = self_attention
|
||||
self.cross_attention = cross_attention
|
||||
self.conv1 = nn.Conv1d(in_channels=d_model, out_channels=d_ff, kernel_size=1)
|
||||
self.conv2 = nn.Conv1d(in_channels=d_ff, out_channels=d_model, kernel_size=1)
|
||||
self.norm1 = nn.LayerNorm(d_model)
|
||||
self.norm2 = nn.LayerNorm(d_model)
|
||||
self.norm3 = nn.LayerNorm(d_model)
|
||||
self.dropout = nn.Dropout(dropout)
|
||||
self.activation = F.relu if activation == "relu" else F.gelu
|
||||
|
||||
def forward(self, x, cross, x_mask=None, cross_mask=None):
|
||||
x = x + self.dropout(self.self_attention(x, x, x, attn_mask=x_mask)[0])
|
||||
x = self.norm1(x)
|
||||
|
||||
x = x + self.dropout(
|
||||
self.cross_attention(x, cross, cross, attn_mask=cross_mask)[0]
|
||||
)
|
||||
|
||||
y = x = self.norm2(x)
|
||||
y = self.dropout(self.activation(self.conv1(y.transpose(-1, 1))))
|
||||
y = self.dropout(self.conv2(y).transpose(-1, 1))
|
||||
|
||||
return self.norm3(x + y)
|
||||
|
||||
|
||||
class Decoder(nn.Module):
|
||||
def __init__(self, layers, norm_layer=None):
|
||||
super(Decoder, self).__init__()
|
||||
self.layers = nn.ModuleList(layers)
|
||||
self.norm = norm_layer
|
||||
|
||||
def forward(self, x, cross, x_mask=None, cross_mask=None):
|
||||
for layer in self.layers:
|
||||
x = layer(x, cross, x_mask=x_mask, cross_mask=cross_mask)
|
||||
|
||||
if self.norm is not None:
|
||||
x = self.norm(x)
|
||||
|
||||
return x
|
||||
|
||||
|
||||
class InformerModel(nn.Module):
|
||||
@validated()
|
||||
def __init__(
|
||||
self,
|
||||
freq: str,
|
||||
context_length: int,
|
||||
prediction_length: int,
|
||||
num_feat_dynamic_real: int,
|
||||
num_feat_static_real: int,
|
||||
num_feat_static_cat: int,
|
||||
cardinality: List[int],
|
||||
# Informer arguments
|
||||
nhead: int,
|
||||
num_encoder_layers: int,
|
||||
num_decoder_layers: int,
|
||||
dim_feedforward: int,
|
||||
activation: str = "gelu",
|
||||
dropout: float = 0.1,
|
||||
attn: str = "prob",
|
||||
factor: int = 5,
|
||||
distil: bool = True,
|
||||
# univariate input
|
||||
input_size: int = 1,
|
||||
embedding_dimension: Optional[List[int]] = None,
|
||||
distr_output: DistributionOutput = StudentTOutput(),
|
||||
lags_seq: Optional[List[int]] = None,
|
||||
scaling: bool = True,
|
||||
num_parallel_samples: int = 100,
|
||||
) -> None:
|
||||
super().__init__()
|
||||
|
||||
self.input_size = input_size
|
||||
|
||||
self.target_shape = distr_output.event_shape
|
||||
self.num_feat_dynamic_real = num_feat_dynamic_real
|
||||
self.num_feat_static_cat = num_feat_static_cat
|
||||
self.num_feat_static_real = num_feat_static_real
|
||||
self.embedding_dimension = (
|
||||
embedding_dimension
|
||||
if embedding_dimension is not None or cardinality is None
|
||||
else [min(50, (cat + 1) // 2) for cat in cardinality]
|
||||
)
|
||||
self.lags_seq = lags_seq or get_lags_for_frequency(freq_str=freq)
|
||||
self.num_parallel_samples = num_parallel_samples
|
||||
self.history_length = context_length + max(self.lags_seq)
|
||||
self.embedder = FeatureEmbedder(
|
||||
cardinalities=cardinality,
|
||||
embedding_dims=self.embedding_dimension,
|
||||
)
|
||||
if scaling:
|
||||
self.scaler = MeanScaler(dim=1, keepdim=True)
|
||||
else:
|
||||
self.scaler = NOPScaler(dim=1, keepdim=True)
|
||||
|
||||
# total feature size
|
||||
d_model = self.input_size * len(self.lags_seq) + self._number_of_features
|
||||
|
||||
self.context_length = context_length
|
||||
self.prediction_length = prediction_length
|
||||
self.distr_output = distr_output
|
||||
self.param_proj = distr_output.get_args_proj(d_model)
|
||||
|
||||
# Informer enc-decoder
|
||||
Attn = ProbAttention if attn == "prob" else FullAttention
|
||||
# Encoder
|
||||
self.encoder = Encoder(
|
||||
[
|
||||
EncoderLayer(
|
||||
AttentionLayer(
|
||||
Attn(
|
||||
mask_flag=False,
|
||||
factor=factor,
|
||||
attention_dropout=dropout,
|
||||
output_attention=False,
|
||||
),
|
||||
d_model,
|
||||
nhead,
|
||||
mix=False,
|
||||
),
|
||||
d_model,
|
||||
d_ff=dim_feedforward,
|
||||
dropout=dropout,
|
||||
activation=activation,
|
||||
)
|
||||
for l in range(num_encoder_layers)
|
||||
],
|
||||
[ConvLayer(d_model) for l in range(num_encoder_layers - 1)]
|
||||
if distil
|
||||
else None,
|
||||
norm_layer=torch.nn.LayerNorm(d_model),
|
||||
)
|
||||
|
||||
# Masked Decoder
|
||||
self.decoder = Decoder(
|
||||
[
|
||||
DecoderLayer(
|
||||
AttentionLayer(
|
||||
Attn(
|
||||
mask_flag=True,
|
||||
factor=factor,
|
||||
attention_dropout=dropout,
|
||||
output_attention=False,
|
||||
),
|
||||
d_model,
|
||||
nhead,
|
||||
mix=True,
|
||||
),
|
||||
AttentionLayer(
|
||||
FullAttention(
|
||||
mask_flag=False,
|
||||
factor=factor,
|
||||
attention_dropout=dropout,
|
||||
output_attention=False,
|
||||
),
|
||||
d_model,
|
||||
nhead,
|
||||
mix=False,
|
||||
),
|
||||
d_model,
|
||||
d_ff=dim_feedforward,
|
||||
dropout=dropout,
|
||||
activation=activation,
|
||||
)
|
||||
for l in range(num_decoder_layers)
|
||||
],
|
||||
norm_layer=torch.nn.LayerNorm(d_model),
|
||||
)
|
||||
|
||||
@property
|
||||
def _number_of_features(self) -> int:
|
||||
return (
|
||||
sum(self.embedding_dimension)
|
||||
+ self.num_feat_dynamic_real
|
||||
+ self.num_feat_static_real
|
||||
+ 1 # the log(scale)
|
||||
)
|
||||
|
||||
@property
|
||||
def _past_length(self) -> int:
|
||||
return self.context_length + max(self.lags_seq)
|
||||
|
||||
def get_lagged_subsequences(
|
||||
self, sequence: torch.Tensor, subsequences_length: int, shift: int = 0
|
||||
) -> torch.Tensor:
|
||||
"""
|
||||
Returns lagged subsequences of a given sequence.
|
||||
Parameters
|
||||
----------
|
||||
sequence : Tensor
|
||||
the sequence from which lagged subsequences should be extracted.
|
||||
Shape: (N, T, C).
|
||||
subsequences_length : int
|
||||
length of the subsequences to be extracted.
|
||||
shift: int
|
||||
shift the lags by this amount back.
|
||||
Returns
|
||||
--------
|
||||
lagged : Tensor
|
||||
a tensor of shape (N, S, C, I), where S = subsequences_length and
|
||||
I = len(indices), containing lagged subsequences. Specifically,
|
||||
lagged[i, j, :, k] = sequence[i, -indices[k]-S+j, :].
|
||||
"""
|
||||
sequence_length = sequence.shape[1]
|
||||
indices = [lag - shift for lag in self.lags_seq]
|
||||
|
||||
assert max(indices) + subsequences_length <= sequence_length, (
|
||||
f"lags cannot go further than history length, found lag {max(indices)} "
|
||||
f"while history length is only {sequence_length}"
|
||||
)
|
||||
|
||||
lagged_values = []
|
||||
for lag_index in indices:
|
||||
begin_index = -lag_index - subsequences_length
|
||||
end_index = -lag_index if lag_index > 0 else None
|
||||
lagged_values.append(sequence[:, begin_index:end_index, ...])
|
||||
return torch.stack(lagged_values, dim=-1)
|
||||
|
||||
def _check_shapes(
|
||||
self,
|
||||
prior_input: torch.Tensor,
|
||||
inputs: torch.Tensor,
|
||||
features: Optional[torch.Tensor],
|
||||
) -> None:
|
||||
assert len(prior_input.shape) == len(inputs.shape)
|
||||
assert (
|
||||
len(prior_input.shape) == 2 and self.input_size == 1
|
||||
) or prior_input.shape[2] == self.input_size
|
||||
assert (len(inputs.shape) == 2 and self.input_size == 1) or inputs.shape[
|
||||
-1
|
||||
] == self.input_size
|
||||
assert (
|
||||
features is None or features.shape[2] == self._number_of_features
|
||||
), f"{features.shape[2]}, expected {self._number_of_features}"
|
||||
|
||||
def create_network_inputs(
|
||||
self,
|
||||
feat_static_cat: torch.Tensor,
|
||||
feat_static_real: torch.Tensor,
|
||||
past_time_feat: torch.Tensor,
|
||||
past_target: torch.Tensor,
|
||||
past_observed_values: torch.Tensor,
|
||||
future_time_feat: Optional[torch.Tensor] = None,
|
||||
future_target: Optional[torch.Tensor] = None,
|
||||
):
|
||||
# time feature
|
||||
time_feat = (
|
||||
torch.cat(
|
||||
(
|
||||
past_time_feat[:, self._past_length - self.context_length :, ...],
|
||||
future_time_feat,
|
||||
),
|
||||
dim=1,
|
||||
)
|
||||
if future_target is not None
|
||||
else past_time_feat[:, self._past_length - self.context_length :, ...]
|
||||
)
|
||||
|
||||
# target
|
||||
context = past_target[:, -self.context_length :]
|
||||
observed_context = past_observed_values[:, -self.context_length :]
|
||||
_, scale = self.scaler(context, observed_context)
|
||||
|
||||
inputs = (
|
||||
torch.cat((past_target, future_target), dim=1) / scale
|
||||
if future_target is not None
|
||||
else past_target / scale
|
||||
)
|
||||
|
||||
inputs_length = (
|
||||
self._past_length + self.prediction_length
|
||||
if future_target is not None
|
||||
else self._past_length
|
||||
)
|
||||
assert inputs.shape[1] == inputs_length
|
||||
|
||||
subsequences_length = (
|
||||
self.context_length + self.prediction_length
|
||||
if future_target is not None
|
||||
else self.context_length
|
||||
)
|
||||
|
||||
# embeddings
|
||||
embedded_cat = self.embedder(feat_static_cat)
|
||||
static_feat = torch.cat(
|
||||
(embedded_cat, feat_static_real, scale.log()),
|
||||
dim=1,
|
||||
)
|
||||
expanded_static_feat = static_feat.unsqueeze(1).expand(
|
||||
-1, time_feat.shape[1], -1
|
||||
)
|
||||
|
||||
features = torch.cat((expanded_static_feat, time_feat), dim=-1)
|
||||
|
||||
# self._check_shapes(prior_input, inputs, features)
|
||||
|
||||
# sequence = torch.cat((prior_input, inputs), dim=1)
|
||||
lagged_sequence = self.get_lagged_subsequences(
|
||||
sequence=inputs,
|
||||
subsequences_length=subsequences_length,
|
||||
)
|
||||
|
||||
lags_shape = lagged_sequence.shape
|
||||
reshaped_lagged_sequence = lagged_sequence.reshape(
|
||||
lags_shape[0], lags_shape[1], -1
|
||||
)
|
||||
|
||||
transformer_inputs = torch.cat((reshaped_lagged_sequence, features), dim=-1)
|
||||
|
||||
return transformer_inputs, scale, static_feat
|
||||
|
||||
def output_params(self, transformer_inputs):
|
||||
enc_input = transformer_inputs[:, : self.context_length, ...]
|
||||
dec_input = transformer_inputs[:, self.context_length :, ...]
|
||||
|
||||
enc_out, _ = self.encoder(enc_input)
|
||||
dec_output = self.decoder(dec_input, enc_out)
|
||||
|
||||
return self.param_proj(dec_output)
|
||||
|
||||
@torch.jit.ignore
|
||||
def output_distribution(
|
||||
self, params, scale=None, trailing_n=None
|
||||
) -> torch.distributions.Distribution:
|
||||
sliced_params = params
|
||||
if trailing_n is not None:
|
||||
sliced_params = [p[:, -trailing_n:] for p in params]
|
||||
return self.distr_output.distribution(sliced_params, scale=scale)
|
||||
|
||||
# for prediction
|
||||
def forward(
|
||||
self,
|
||||
feat_static_cat: torch.Tensor,
|
||||
feat_static_real: torch.Tensor,
|
||||
past_time_feat: torch.Tensor,
|
||||
past_target: torch.Tensor,
|
||||
past_observed_values: torch.Tensor,
|
||||
future_time_feat: torch.Tensor,
|
||||
num_parallel_samples: Optional[int] = None,
|
||||
) -> torch.Tensor:
|
||||
|
||||
if num_parallel_samples is None:
|
||||
num_parallel_samples = self.num_parallel_samples
|
||||
|
||||
encoder_inputs, scale, static_feat = self.create_network_inputs(
|
||||
feat_static_cat,
|
||||
feat_static_real,
|
||||
past_time_feat,
|
||||
past_target,
|
||||
past_observed_values,
|
||||
)
|
||||
|
||||
enc_out, _ = self.encoder(encoder_inputs)
|
||||
|
||||
repeated_scale = scale.repeat_interleave(
|
||||
repeats=self.num_parallel_samples, dim=0
|
||||
)
|
||||
|
||||
repeated_past_target = (
|
||||
past_target.repeat_interleave(repeats=self.num_parallel_samples, dim=0)
|
||||
/ repeated_scale
|
||||
)
|
||||
|
||||
expanded_static_feat = static_feat.unsqueeze(1).expand(
|
||||
-1, future_time_feat.shape[1], -1
|
||||
)
|
||||
features = torch.cat((expanded_static_feat, future_time_feat), dim=-1)
|
||||
repeated_features = features.repeat_interleave(
|
||||
repeats=self.num_parallel_samples, dim=0
|
||||
)
|
||||
|
||||
repeated_enc_out = enc_out.repeat_interleave(
|
||||
repeats=self.num_parallel_samples, dim=0
|
||||
)
|
||||
|
||||
future_samples = []
|
||||
|
||||
# greedy decoding
|
||||
for k in range(self.prediction_length):
|
||||
# self._check_shapes(repeated_past_target, next_sample, next_features)
|
||||
# sequence = torch.cat((repeated_past_target, next_sample), dim=1)
|
||||
|
||||
lagged_sequence = self.get_lagged_subsequences(
|
||||
sequence=repeated_past_target,
|
||||
subsequences_length=1 + k,
|
||||
shift=1,
|
||||
)
|
||||
|
||||
lags_shape = lagged_sequence.shape
|
||||
reshaped_lagged_sequence = lagged_sequence.reshape(
|
||||
lags_shape[0], lags_shape[1], -1
|
||||
)
|
||||
|
||||
decoder_input = torch.cat(
|
||||
(reshaped_lagged_sequence, repeated_features[:, : k + 1]), dim=-1
|
||||
)
|
||||
|
||||
output = self.decoder(decoder_input, repeated_enc_out)
|
||||
|
||||
params = self.param_proj(output[:, -1:])
|
||||
distr = self.output_distribution(params, scale=repeated_scale)
|
||||
next_sample = distr.sample()
|
||||
|
||||
repeated_past_target = torch.cat(
|
||||
(repeated_past_target, next_sample / repeated_scale), dim=1
|
||||
)
|
||||
future_samples.append(next_sample)
|
||||
|
||||
concat_future_samples = torch.cat(future_samples, dim=1)
|
||||
return concat_future_samples.reshape(
|
||||
(-1, self.num_parallel_samples, self.prediction_length) + self.target_shape,
|
||||
)
|
||||
Reference in New Issue
Block a user