add example script for regionprops function to documentation

This commit is contained in:
Johannes Schönberger
2012-05-22 23:28:14 +02:00
parent 7b0703f663
commit 12a878dd59
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"""
=========================
Measure region properties
=========================
This example shows how to measure properties of labelled image regions.
"""
import math
import matplotlib.pyplot as plt
import numpy as np
from skimage.draw import ellipse
from skimage.morphology import label
from skimage.measure import regionprops
from scipy.ndimage import geometric_transform
ANGLE = 0.2
def rotate(xy):
x, y = xy
out_x = math.cos(ANGLE) * x - math.sin(ANGLE) * y
out_y = math.sin(ANGLE) * x + math.cos(ANGLE) * y
return (out_x, out_y)
image = np.zeros((600, 600), 'int')
rr, cc = ellipse(300, 350, 100, 220)
image[rr,cc] = 1
image = geometric_transform(image, rotate)
label_img = label(image)
props = regionprops(label_img, [
'BoundingBox',
'Centroid',
'Orientation',
'MajorAxisLength',
'MinorAxisLength'
])
plt.imshow(image)
for prop in props:
x0 = prop['Centroid'][1]
y0 = prop['Centroid'][0]
x1 = x0 + math.cos(prop['Orientation']) * 0.5 * prop['MajorAxisLength']
y1 = y0 - math.sin(prop['Orientation']) * 0.5 * prop['MajorAxisLength']
x2 = x0 - math.sin(prop['Orientation']) * 0.5 * prop['MinorAxisLength']
y2 = y0 - math.cos(prop['Orientation']) * 0.5 * prop['MinorAxisLength']
plt.plot((x0, x1), (y0, y1), '-r', linewidth=2.5)
plt.plot((x0, x2), (y0, y2), '-r', linewidth=2.5)
plt.plot(x0, y0, '.g', markersize=15)
minr, minc, maxr, maxc = prop['BoundingBox']
bx = (minc, maxc, maxc, minc, minc)
by = (minr, minr, maxr, maxr, minr)
plt.plot(bx, by, '-b', linewidth=2.5)
plt.gray()
plt.axis((0, 600, 600, 0))
plt.show()