Remove unused cmorph extension

The C morphology module has been superseded by wrapping scipy.ndimage.

bento.info

@@ -79,9 +79,6 @@ Library:
     Extension: skimage.graph._spath
         Sources:
             skimage/graph/_spath.pyx
-    Extension: skimage.morphology.cmorph
-        Sources:
-            skimage/morphology/cmorph.pyx
     Extension: skimage.graph.heap
         Sources:
             skimage/graph/heap.pyx

skimage/filters/rank/README.rst

@@ -16,7 +16,7 @@ followed by the moving window is given hereunder
 /--------------------------/
 \-------------------------- ...
 
-We compare cmorph.dilate to this histogram based method to show how
+We compare grey.dilate to this histogram based method to show how
 computational costs increase with respect to image size or structuring element
 size. This implementation gives better results for large structuring elements.
 

skimage/filters/rank/tests/test_rank.py

@@ -5,7 +5,7 @@ from numpy.testing import run_module_suite, assert_equal, assert_raises
 import skimage
 from skimage import img_as_ubyte, img_as_float
 from skimage import data, util, morphology
-from skimage.morphology import cmorph, disk
+from skimage.morphology import grey, disk
 from skimage.filters import rank
 from skimage._shared._warnings import expected_warnings
 
@@ -118,7 +118,7 @@ def test_random_sizes():
         assert_equal(image16.shape, out16.shape)
 
 
-def test_compare_with_cmorph_dilate():
+def test_compare_with_grey_dilation():
     # compare the result of maximum filter with dilate
 
     image = (np.random.rand(100, 100) * 256).astype(np.uint8)
@@ -128,11 +128,11 @@ def test_compare_with_cmorph_dilate():
     for r in range(1, 20, 1):
         elem = np.ones((r, r), dtype=np.uint8)
         rank.maximum(image=image, selem=elem, out=out, mask=mask)
-        cm = cmorph._dilate(image=image, selem=elem)
+        cm = grey.dilation(image=image, selem=elem)
         assert_equal(out, cm)
 
 
-def test_compare_with_cmorph_erode():
+def test_compare_with_grey_erosion():
     # compare the result of maximum filter with erode
 
     image = (np.random.rand(100, 100) * 256).astype(np.uint8)
@@ -142,7 +142,7 @@ def test_compare_with_cmorph_erode():
     for r in range(1, 20, 1):
         elem = np.ones((r, r), dtype=np.uint8)
         rank.minimum(image=image, selem=elem, out=out, mask=mask)
-        cm = cmorph._erode(image=image, selem=elem)
+        cm = grey.erosion(image=image, selem=elem)
         assert_equal(out, cm)
 
 

skimage/morphology/setup.py

@@ -12,14 +12,11 @@ def configuration(parent_package='', top_path=None):
     config = Configuration('morphology', parent_package, top_path)
     config.add_data_dir('tests')
 
-    cython(['cmorph.pyx'], working_path=base_path)
     cython(['_watershed.pyx'], working_path=base_path)
     cython(['_skeletonize_cy.pyx'], working_path=base_path)
     cython(['_convex_hull.pyx'], working_path=base_path)
     cython(['_greyreconstruct.pyx'], working_path=base_path)
 
-    config.add_extension('cmorph', sources=['cmorph.c'],
-                         include_dirs=[get_numpy_include_dirs()])
     config.add_extension('_watershed', sources=['_watershed.c'],
                          include_dirs=[get_numpy_include_dirs()])
     config.add_extension('_skeletonize_cy', sources=['_skeletonize_cy.c'],