DOC: add mosaic_threshold

This commit is contained in:
François Boulogne
2016-05-29 18:04:18 +02:00
parent a7cf3cbd52
commit 20f33e18fe
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Thresholding
============
Thresholding is used to create a binary image. This example uses Otsu's method
to calculate the threshold value.
Thresholding is used to create a binary image from a grayscale image [1]_.
Thresholding algorithms can be separated in two categories:
* Global. They are based on the histogram of the pixel intensity of
the image.
* Local. To process a pixel, only the neighboring pixels are used.
These algorithms often require more computation time.
Scikit-image includes a function to test thresholding algorithms provided
in the library. Therefore, in a glance, you can select the best algorithm
for you data, without a deep understanding of their mechanisms.
.. [1] https://en.wikipedia.org/wiki/Thresholding_%28image_processing%29
"""
from skimage.data import page
img = page()
# Here, we specify a radius for local thresholding algorithm.
# If it is not specified, only global algorithms are called.
fig, ax = mosaic_threshold(img, radius=20, figsize=(10,8), verbose=False)
fig
"""
.. image:: PLOT2RST.current_figure
This example uses Otsu's method [2]_ to calculate the threshold value.
Otsu's method calculates an "optimal" threshold (marked by a red line in the
histogram below) by maximizing the variance between two classes of pixels,
which are separated by the threshold. Equivalently, this threshold minimizes
the intra-class variance.
.. [1] http://en.wikipedia.org/wiki/Otsu's_method
.. [2] http://en.wikipedia.org/wiki/Otsu's_method
"""
import matplotlib