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now N dimensional, changes constant, cleans and comments
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@@ -7,7 +7,7 @@ from __future__ import division
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import numpy as np
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import numpy.random as npr
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from scipy.signal import fftconvolve, convolve2d
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from scipy.signal import fftconvolve, convolve
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from . import uft
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@@ -336,7 +336,7 @@ def richardson_lucy(image, psf, iterations=50, clip=True):
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Parameters
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----------
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image : ndarray
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Input degraded image.
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Input degraded image (can be N dimensional).
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psf : ndarray
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The point spread function.
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iterations : int
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@@ -365,15 +365,23 @@ def richardson_lucy(image, psf, iterations=50, clip=True):
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----------
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.. [1] http://en.wikipedia.org/wiki/Richardson%E2%80%93Lucy_deconvolution
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"""
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direct_time = lambda n, m, k, l: k*l * n*m
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def fft_time(m, n, k, l):
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return m*np.log(m) + n*np.log(n) + k*np.log(k) + l*np.log(l)
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# compute the times for direct convolution and the fft method. The fft is of
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# complexity O(N log(N)) for each dimension and the direct method does
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# straight arithmetic (and is O(n*k) to add n elements k times)
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def direct_time(img_shape, kernel_shape):
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return np.prod(img_shape + kernel_shape)
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def fft_time(img_shape, kernel_shape):
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return np.sum([n*np.log(n) for n in img_shape+kernel_shape])
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# see whether the fourier transform convolution method or the direct
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# convolution method is faster (discussed in scikit-image PR #1792)
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time_ratio = 71.468 * fft_time(*(image.shape + psf.shape))
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time_ratio /= direct_time(*(image.shape + psf.shape))
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convolve_method = fftconvolve if time_ratio <= 1 else convolve2d
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time_ratio = 40.032 * fft_time(image.shape, psf.shape))
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time_ratio /= direct_time(image.shape, psf.shape)
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if time_ratio <= 1 or len(image.shape) > 2:
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convolve_method = fftconvolve
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else:
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convolve_method = convolve
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image = image.astype(np.float)
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psf = psf.astype(np.float)
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