mirror of
https://github.com/wassname/scikit-image.git
synced 2026-07-31 12:41:20 +08:00
Just disable doctests in tifffile_local
This commit is contained in:
Steven Silvester
+36
-36
@@ -116,13 +116,13 @@ References
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Examples
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--------
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>>> data = numpy.random.rand(5, 301, 219)
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>>> imsave('temp.tif', data)
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>> data = numpy.random.rand(5, 301, 219)
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>> imsave('temp.tif', data)
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>>> image = imread('temp.tif')
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>>> numpy.testing.assert_array_equal(image, data)
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>> image = imread('temp.tif')
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>> numpy.testing.assert_array_equal(image, data)
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>>> with TiffFile('temp.tif') as tif:
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>> with TiffFile('temp.tif') as tif:
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... images = tif.asarray()
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... for page in tif:
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... for tag in page.tags.values():
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@@ -180,9 +180,9 @@ def imsave(filename, data, **kwargs):
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Examples
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--------
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>>> data = numpy.random.rand(2, 5, 3, 301, 219)
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>>> description = u'{"shape": %s}' % str(list(data.shape))
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>>> imsave('temp.tif', data, compress=6,
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>> data = numpy.random.rand(2, 5, 3, 301, 219)
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>> description = u'{"shape": %s}' % str(list(data.shape))
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>> imsave('temp.tif', data, compress=6,
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... extratags=[(270, 's', 0, description, True)])
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"""
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@@ -209,8 +209,8 @@ class TiffWriter(object):
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Examples
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--------
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>>> data = numpy.random.rand(2, 5, 3, 301, 219)
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>>> with TiffWriter('temp.tif', bigtiff=True) as tif:
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>> data = numpy.random.rand(2, 5, 3, 301, 219)
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>> with TiffWriter('temp.tif', bigtiff=True) as tif:
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... for i in range(data.shape[0]):
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... tif.save(data[i], compress=6)
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@@ -663,11 +663,11 @@ def imread(files, **kwargs):
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Examples
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--------
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>>> im = imread('test.tif', key=0)
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>>> im.shape
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>> im = imread('test.tif', key=0)
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>> im.shape
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(256, 256, 4)
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>>> ims = imread(['test.tif', 'test.tif'])
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>>> ims.shape
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>> ims = imread(['test.tif', 'test.tif'])
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>> ims.shape
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(2, 256, 256, 4)
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"""
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@@ -733,7 +733,7 @@ class TiffFile(object):
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Examples
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--------
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>>> with TiffFile('test.tif') as tif:
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>> with TiffFile('test.tif') as tif:
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... data = tif.asarray()
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... data.shape
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(256, 256, 4)
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@@ -2215,11 +2215,11 @@ class TiffSequence(object):
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Examples
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--------
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>>> tifs = TiffSequence("test.oif.files/*.tif")
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>>> tifs.shape, tifs.axes
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>> tifs = TiffSequence("test.oif.files/*.tif")
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>> tifs.shape, tifs.axes
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((2, 100), 'CT')
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>>> data = tifs.asarray()
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>>> data.shape
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>> data = tifs.asarray()
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>> data.shape
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(2, 100, 256, 256)
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"""
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@@ -3316,12 +3316,12 @@ def unpackrgb(data, dtype='<B', bitspersample=(5, 6, 5), rescale=True):
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Examples
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--------
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>>> data = struct.pack('BBBB', 0x21, 0x08, 0xff, 0xff)
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>>> print(unpackrgb(data, '<B', (5, 6, 5), False))
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>> data = struct.pack('BBBB', 0x21, 0x08, 0xff, 0xff)
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>> print(unpackrgb(data, '<B', (5, 6, 5), False))
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[ 1 1 1 31 63 31]
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>>> print(unpackrgb(data, '<B', (5, 6, 5)))
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>> print(unpackrgb(data, '<B', (5, 6, 5)))
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[ 8 4 8 255 255 255]
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>>> print(unpackrgb(data, '<B', (5, 5, 5)))
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>> print(unpackrgb(data, '<B', (5, 5, 5)))
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[ 16 8 8 255 255 255]
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"""
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@@ -3381,7 +3381,7 @@ def squeeze_axes(shape, axes, skip='XY'):
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Remove unused dimensions unless their axes are listed in 'skip'.
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>>> squeeze_axes((5, 1, 2, 1, 1), 'TZYXC')
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>> squeeze_axes((5, 1, 2, 1, 1), 'TZYXC')
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((5, 2, 1), 'TYX')
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"""
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@@ -3397,7 +3397,7 @@ def transpose_axes(data, axes, asaxes='CTZYX'):
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A view is returned if possible.
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>>> transpose_axes(numpy.zeros((2, 3, 4, 5)), 'TYXC', asaxes='CTZYX').shape
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>> transpose_axes(numpy.zeros((2, 3, 4, 5)), 'TYXC', asaxes='CTZYX').shape
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(5, 2, 1, 3, 4)
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"""
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@@ -3448,7 +3448,7 @@ def stripnull(string):
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Clean NULL terminated C strings.
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>>> stripnull(b'string\\x00')
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>> stripnull(b'string\\x00')
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b'string'
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"""
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@@ -3461,9 +3461,9 @@ def stripascii(string):
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Clean NULL separated and terminated TIFF strings.
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>>> stripascii(b'string\\x00string\\n\\x01\\x00')
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>> stripascii(b'string\\x00string\\n\\x01\\x00')
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b'string\\x00string\\n'
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>>> stripascii(b'\\x00')
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>> stripascii(b'\\x00')
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b''
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"""
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@@ -3490,9 +3490,9 @@ def format_size(size):
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def sequence(value):
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"""Return tuple containing value if value is not a sequence.
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>>> sequence(1)
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>> sequence(1)
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(1,)
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>>> sequence([1])
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>> sequence([1])
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[1]
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"""
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@@ -3508,9 +3508,9 @@ def product(iterable):
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Equivalent of functools.reduce(operator.mul, iterable, 1).
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>>> product([2**8, 2**30])
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>> product([2**8, 2**30])
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274877906944
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>>> product([])
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>> product([])
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1
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"""
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@@ -3525,7 +3525,7 @@ def natural_sorted(iterable):
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E.g. for sorting file names.
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>>> natural_sorted(['f1', 'f2', 'f10'])
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>> natural_sorted(['f1', 'f2', 'f10'])
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['f1', 'f2', 'f10']
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"""
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@@ -3540,7 +3540,7 @@ def excel_datetime(timestamp, epoch=datetime.datetime.fromordinal(693594)):
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Convert LSM time stamps.
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>>> excel_datetime(40237.029999999795)
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>> excel_datetime(40237.029999999795)
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datetime.datetime(2010, 2, 28, 0, 43, 11, 999982)
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"""
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@@ -3552,7 +3552,7 @@ def julian_datetime(julianday, milisecond=0):
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Convert Julian dates according to MetaMorph.
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>>> julian_datetime(2451576, 54362783)
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>> julian_datetime(2451576, 54362783)
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datetime.datetime(2000, 2, 2, 15, 6, 2, 783)
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"""
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@@ -3586,7 +3586,7 @@ def test_tifffile(directory='testimages', verbose=True):
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Print error message on failure.
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>>> test_tifffile(verbose=False)
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>> test_tifffile(verbose=False)
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"""
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successful = 0
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@@ -40,7 +40,7 @@ echo 'backend.qt4 : '$MPL_QT_API >> $MPL_DIR/matplotlibrc
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tools/header.py "Run tests with all dependencies"
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# run tests again with optional dependencies to get more coverage
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TEST_ARGS='--exe -v --with-doctest --exclude="skimage/external/*"'
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TEST_ARGS='--exe -v --with-doctest'
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if [[ $TRAVIS_PYTHON_VERSION == 3.3 ]]; then
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TEST_ARGS="$TEST_ARGS --with-cov --cover-package skimage"
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fi
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