DOC: Add quickstart for viewer to User Guide

This commit is contained in:
Tony S Yu
2012-09-04 23:03:16 -04:00
parent 4449df2658
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user_guide/plugins
user_guide/tutorials
user_guide/getting_help
user_guide/viewer
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Image Viewer
============
Quick Start
-----------
``skimage.viewer`` provides a matplotlib_-based canvas for displaying images and
a Qt-based GUI-toolkit, with the goal of making it easy to create interactive
image editors. You can simply use it to display an image::
>>> from skimage import data
>>> from skimage.viewer import ImageViewer
>>> image = data.camera()
>>> view = ImageViewer(image)
>>> view.show()
Of course, you could just as easily use ``imshow`` from matplotlib_ (or
alternatively, ``skimage.io.imshow`` which adds support for multiple
io-plugins) to display images. The advantage of ``ImageViewer`` is that you can
easily add plugins for manipulating images. Currently, only a few plugins are
implemented, but it is easy to write your own. Before going into the details,
let's see an example of how a plugin is added to the viewer::
>>> import skimage
>>> from skimage.viewer.plugins import Canny
>>> image = skimage.img_as_float(data.camera())
>>> viewer = ImageViewer(image)
>>> viewer += Canny(view)
>>> viewer.show()
At the moment, there aren't very many plugins pre-defined, but there's a really
simple interface for creating your own plugin. First, let's create a plugin to
call the total-variation denoising function, ``tv_denoise``:
.. code-block:: python
from skimage.filter import tv_denoise
from skimage.viewer.plugins.base import Plugin
denoise_plugin = Plugin(image_filter=tv_denoise)
.. note::
The ``Plugin`` assumes the first argument given to the image filter is the
image from the image viewer. In the future, this should be changed so you
can pass the image to a different argument of the filter function.
To actually interact with the filter, you have to add widgets that adjust the
parameters of the function. Typically, that means adding a slider widget and
connecting it to the filter parameter and the minimum and maximum values of the
slider:
.. code-block:: python
from skimage.viewer.widgets import Slider
from skimage.viewer.widgets.history import SaveButtons
denoise_plugin += Slider('weight', 0.01, 0.5, update_on='release')
denoise_plugin += SaveButtons()
Here, we connect a slider widget to the filter's 'weight' argument. We also
added some buttons for saving the image to file or to the ``scikits-image``
image stack (see ``skimage.io.push`` and ``skimage.io.pop``).
All that's left is to create an image viewer and add the plugin to that viewer.
.. code-block:: python
from skimage import data
from skimage.viewer import ImageViewer
image = data.coins()
viewer = ImageViewer(image)
viewer += denoise_plugin
viewer.show()
.. image:: data/denoise_viewer_window.png
.. image:: data/denoise_plugin_window.png
.. _matplotlib: http://matplotlib.sourceforge.net/