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Add test case for *_boundaries functions
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import numpy as np
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from numpy.testing import assert_array_equal
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from skimage.segmentation import find_boundaries, mark_boundaries
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def test_find_boundaries():
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image = np.zeros((10, 10))
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image[2:7, 2:7] = 1
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ref = np.array([[0, 0, 0, 0, 0, 0, 0, 0, 0, 0],
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[0, 0, 0, 0, 0, 0, 0, 0, 0, 0],
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[0, 0, 1, 1, 1, 1, 1, 1, 0, 0],
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[0, 0, 1, 0, 0, 0, 0, 1, 0, 0],
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[0, 0, 1, 0, 0, 0, 0, 1, 0, 0],
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[0, 0, 1, 0, 0, 0, 0, 1, 0, 0],
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[0, 0, 1, 0, 0, 0, 0, 1, 0, 0],
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[0, 0, 1, 1, 1, 1, 1, 0, 0, 0],
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[0, 0, 0, 0, 0, 0, 0, 0, 0, 0],
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[0, 0, 0, 0, 0, 0, 0, 0, 0, 0]])
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result = find_boundaries(image)
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assert_array_equal(result, ref)
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def test_mark_boundaries():
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image = np.zeros((10, 10))
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label_image = np.zeros((10, 10))
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label_image[2:7, 2:7] = 1
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ref = np.array([[0, 0, 0, 0, 0, 0, 0, 0, 0, 0],
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[0, 0, 0, 0, 0, 0, 0, 0, 0, 0],
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[0, 0, 1, 1, 1, 1, 1, 1, 0, 0],
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[0, 0, 1, 0, 0, 0, 0, 1, 0, 0],
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[0, 0, 1, 0, 0, 0, 0, 1, 0, 0],
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[0, 0, 1, 0, 0, 0, 0, 1, 0, 0],
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[0, 0, 1, 0, 0, 0, 0, 1, 0, 0],
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[0, 0, 1, 1, 1, 1, 1, 0, 0, 0],
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[0, 0, 0, 0, 0, 0, 0, 0, 0, 0],
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[0, 0, 0, 0, 0, 0, 0, 0, 0, 0]])
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result = mark_boundaries(image, label_image, color=(1, 1, 1)).mean(axis=2)
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assert_array_equal(result, ref)
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ref = np.array([[0, 0, 0, 0, 0, 0, 0, 0, 0, 0],
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[0, 0, 0, 0, 0, 0, 0, 0, 0, 0],
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[0, 0, 1, 1, 1, 1, 1, 1, 2, 0],
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[0, 0, 1, 2, 2, 2, 2, 1, 2, 0],
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[0, 0, 1, 2, 0, 0, 0, 1, 2, 0],
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[0, 0, 1, 2, 0, 0, 0, 1, 2, 0],
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[0, 0, 1, 2, 0, 0, 0, 1, 2, 0],
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[0, 0, 1, 1, 1, 1, 1, 2, 2, 0],
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[0, 0, 2, 2, 2, 2, 2, 2, 0, 0],
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[0, 0, 0, 0, 0, 0, 0, 0, 0, 0]])
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result = mark_boundaries(image, label_image, color=(1, 1, 1),
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outline_color=(2, 2, 2)).mean(axis=2)
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assert_array_equal(result, ref)
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if __name__ == "__main__":
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np.testing.run_module_suite()
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