Merge pull request #936 from sharky93/ipython-notebookcreation

Add IPython notebooks to the gallery
This commit is contained in:
Stefan van der Walt
2014-04-16 23:21:47 +02:00
2 changed files with 164 additions and 2 deletions
+126
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@@ -0,0 +1,126 @@
__all__ = ['python_to_notebook', 'Notebook']
import json
import copy
import warnings
# Skeleton notebook in JSON format
skeleton_nb = """{
"metadata": {
"name":""
},
"nbformat": 3,
"nbformat_minor": 0,
"worksheets": [
{
"cells": [
{
"cell_type": "code",
"collapsed": false,
"input": [
"%matplotlib inline"
],
"language": "python",
"metadata": {},
"outputs": []
}
],
"metadata": {}
}
]
}"""
class Notebook(object):
"""
Notebook object for building an IPython notebook cell-by-cell.
"""
def __init__(self):
# cell type code
self.cell_code = {
'cell_type': 'code',
'collapsed': False,
'input': [
'# Code Goes Here'
],
'language': 'python',
'metadata': {},
'outputs': []
}
# cell type markdown
self.cell_md = {
'cell_type': 'markdown',
'metadata': {},
'source': [
'Markdown Goes Here'
]
}
self.template = json.loads(skeleton_nb)
self.cell_type = {'input': self.cell_code, 'source': self.cell_md}
self.valuetype_to_celltype = {'code': 'input', 'markdown': 'source'}
def add_cell(self, value, cell_type='code'):
"""Add a notebook cell.
Parameters
----------
value : str
Cell content.
cell_type : {'code', 'markdown'}
Type of content (default is 'code').
"""
if cell_type in ['markdown', 'code']:
key = self.valuetype_to_celltype[cell_type]
cells = self.template['worksheets'][0]['cells']
cells.append(copy.deepcopy(self.cell_type[key]))
# assign value to the last cell
cells[-1][key] = value
else:
warnings.warn('Ignoring unsupported cell type (%s)' % cell_type)
def json(self):
"""Return a JSON representation of the notebook.
Returns
-------
str
JSON notebook.
"""
return json.dumps(self.template, indent=2)
def test_notebook_basic():
nb = Notebook()
assert(json.loads(nb.json()) == json.loads(skeleton_nb))
def test_notebook_add():
nb = Notebook()
str1 = 'hello world'
str2 = 'f = lambda x: x * x'
nb.add_cell(str1, cell_type='markdown')
nb.add_cell(str2, cell_type='code')
d = json.loads(nb.json())
cells = d['worksheets'][0]['cells']
values = [c['input'] if c['cell_type'] == 'code' else c['source']
for c in cells]
assert values[1] == str1
assert values[2] == str2
assert cells[1]['cell_type'] == 'markdown'
assert cells[2]['cell_type'] == 'code'
if __name__ == "__main__":
import numpy.testing as npt
npt.run_module_suite()
+38 -2
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@@ -80,6 +80,10 @@ from skimage import io
from skimage import transform
from skimage.util.dtype import dtype_range
from notebook import Notebook
from docutils.core import publish_parts
LITERALINCLUDE = """
.. literalinclude:: {src_name}
@@ -94,6 +98,13 @@ CODE_LINK = """
"""
NOTEBOOK_LINK = """
**IPython Notebook:** :download:`download <{0}>`
(generated using ``skimage`` |version|)
"""
TOCTREE_TEMPLATE = """
.. toctree::
:hidden:
@@ -305,16 +316,20 @@ def write_example(src_name, src_dir, rst_dir, cfg):
image_dir = rst_dir.pjoin('images')
thumb_dir = image_dir.pjoin('thumb')
notebook_dir = rst_dir.pjoin('notebook')
image_dir.makedirs()
thumb_dir.makedirs()
notebook_dir.makedirs()
base_image_name = os.path.splitext(src_name)[0]
image_path = image_dir.pjoin(base_image_name + '_{0}.png')
basename, py_ext = os.path.splitext(src_name)
rst_path = rst_dir.pjoin(basename + cfg.source_suffix)
notebook_path = notebook_dir.pjoin(basename + '.ipynb')
if _plots_are_current(src_path, image_path) and rst_path.exists:
if _plots_are_current(src_path, image_path) and rst_path.exists and \
notebook_path.exists:
return
blocks = split_code_and_text_blocks(example_file)
@@ -341,8 +356,11 @@ def write_example(src_name, src_dir, rst_dir, cfg):
example_rst += LITERALINCLUDE.format(**code_info)
example_rst += CODE_LINK.format(src_name)
ipnotebook_name = src_name.replace('.py', '.ipynb')
ipnotebook_name = './notebook/' + ipnotebook_name
example_rst += NOTEBOOK_LINK.format(ipnotebook_name)
f = open(rst_path,'w')
f = open(rst_path, 'w')
f.write(example_rst)
f.flush()
@@ -359,6 +377,24 @@ def write_example(src_name, src_dir, rst_dir, cfg):
else:
shutil.copy(cfg.plot2rst_default_thumb, thumb_path)
# Export example to IPython notebook
nb = Notebook()
for (cell_type, _, content) in blocks:
content = content.rstrip('\n')
if cell_type == 'code':
nb.add_cell(content, cell_type='code')
else:
content = content.replace('"""', '')
content = '\n'.join([line for line in content.split('\n') if
not line.startswith('.. image')])
html = publish_parts(content, writer_name='html')['html_body']
nb.add_cell(html, cell_type='markdown')
with open(notebook_path, 'w') as f:
f.write(nb.json())
def save_thumbnail(image, thumb_path, shape):
"""Save image as a thumbnail with the specified shape.