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7,689 Commits 8 Branches 45 Tags
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Commit Graph
4773 Commits
Author SHA1 Message Date
Stefan van der Walt 024dd34b19 Clean up style and PEP8 2015-12-14 00:42:29 -08:00
Stefan van der Walt 5e848f5889 Auto-generate _RegionProps property docstrings 2015-12-14 00:42:29 -08:00
Juan Nunez-Iglesias 975d1a4cc0 Merge pull request #1792 from scottsievert/fftconvolve 
Uses fftconvolve instead of convolve2d for speedups
 2015-12-14 16:37:18 +11:00
Stefan van der Walt 084ad3c22b Merge pull request #1821 from jni/integral-image-fixes 
Add deprecation path to skimage.transform.integrate API change
 2015-12-13 20:36:16 -08:00
scottsievert 2892e90abc removes paren 2015-12-13 16:59:59 -06:00
scottsievert 4d6c9e7b84 now N dimensional, changes constant, cleans and comments 2015-12-13 14:57:52 -06:00
Steven Silvester 5b8fd77b80 Merge pull request #1691 from juliusbierk/active-contour-model 
New feature: Active contour model
 2015-12-13 14:57:10 -06:00
Juan Nunez-Iglesias 0bc3ad8f79 Restore vectorised integrate deprecated behaviour 2015-12-13 16:25:29 +11:00
Juan Nunez-Iglesias 3899c571b7 Test individual coordinates for integrate in doctest 2015-12-13 14:55:44 +11:00
Juan Nunez-Iglesias c7243e7383 Allow passing individual coordinate tuples to integrate 2015-12-13 14:55:23 +11:00
Juan Nunez-Iglesias 5df9e0cf70 Update incorrect version number in docstring 2015-12-13 14:54:57 +11:00
Juan Nunez-Iglesias 458dc15225 Add deprecation warning for old syntax for integrate() 2015-12-13 14:45:45 +11:00
Juan Nunez-Iglesias 38b1880ef7 Update docstring comments for integrate function 2015-12-13 14:35:59 +11:00
scottsievert 3fd47091dd adds comment explaining time_ratio decision 2015-12-12 21:15:01 -06:00
Steven Silvester 683ecde2e1 Start deprecation of python 2.6 2015-12-12 20:27:21 -06:00
scottsievert 3f3b705ebd fixes import, tuple addition 2015-12-12 19:26:10 -06:00
Juan Nunez-Iglesias 8b0d5113eb Merge pull request #1818 from blink1073/improve_downcast 
Add support for casting from 64bit integers and use smart downcast
 2015-12-13 10:54:39 +11:00
Juan Nunez-Iglesias 5eaf2010df Merge pull request #953 from syedTabish/Issue949 
Update integral image to support nD images
 2015-12-13 10:53:09 +11:00
Steven Silvester 4e00d45f68 Improve warning message 2015-12-12 17:07:36 -06:00
Steven Silvester f3965885e8 Fix failing test 2015-12-12 16:42:54 -06:00
Steven Silvester be7161d350 Add debug print 2015-12-12 16:20:26 -06:00
Steven Silvester a6f4419da4 Update failing tests 2015-12-12 14:20:38 -06:00
Steven Silvester f8d19ae7f0 Allow 64bit integer conversions and direct downcast 2015-12-12 13:40:32 -06:00
Steven Silvester 4b6db6425e Fix matplotlib backend 
Add a debug print

Try with qtagg

Try with qt4agg

Comment out failing test for now
 2015-12-11 10:49:11 -06:00
emmanuelle a16c530322 Some minor PEP8 issues 2015-12-11 17:21:17 +01:00
scottsievert 1be8336599 adds decision when to use fftconvolve/convolve2d 2015-12-10 19:47:02 -06:00
Juan Nunez-Iglesias 966e0fd685 Merge pull request #1770 from stefanv/list_regionprops 
Only iterate over available region properties
 2015-12-09 11:21:56 +11:00
Juan Nunez-Iglesias 1a05b130e8 Merge pull request #1449 from stefanv/clear_border_non_binary 
Allow clear_border to operate on labeled images
 2015-12-09 11:18:40 +11:00
Stefan van der Walt c133d5fd59 Merge pull request #1803 from JDWarner/mesh_orientation_cleanup 
Guarantee correct mesh orientation from marching cubes
 2015-12-07 20:13:58 -08:00
Josh Warner (Mac) 443f4cc0eb DOC: Correct docstring to correctly reflect defaults 2015-12-07 21:12:17 -07:00
emmanuelleandJuan Nunez-Iglesias bff2ce0bc4 Missing line 2015-12-08 12:27:24 +11:00
emmanuelleandJuan Nunez-Iglesias bb64e8cfcb Added test for slic segmentation: case where more segments than pixels 
are asked for.
 2015-12-08 12:27:24 +11:00
Gael VaroquauxandJuan Nunez-Iglesias 12c173908f BUX: in _slic.pyx slice can has steps=None 
int(None) fails, and slice.steps == None is valid. It is equivalent to 1.
 2015-12-08 12:27:24 +11:00
Josh Warner 29725068ce Guarantee correct mesh orientation from marching cubes 2015-12-06 00:28:18 -06:00
Josh Warner 6f016c9087 Merge pull request #1771 from noahtreb/fix-correct_mesh_orientation 
FIX: Fix `correct_mesh_orientation` for spacing != (1,1,1)
 2015-12-05 12:22:18 -06:00
Josh Warner f25b46c9bb Merge pull request #1799 from ahojnnes/linemodelnd 
FIX: Fix LineModelND test cases and linalg.norm axis error
 2015-12-05 11:48:26 -06:00
Steven Silvester 219d08ad7b Fix errant docstring 2015-12-05 10:35:11 -06:00
Johannes Schönberger 50f2a0b4ed Create helper function to compute norm along axis 2015-12-04 23:11:19 -05:00
Johannes Schönberger f88694e5a3 Fix LineModelND test cases 2015-12-04 23:05:59 -05:00
Johannes Schönberger 198ce0250b Merge pull request #1764 from glemaitre/geometric_mean 
Geometric mean
 2015-12-04 18:02:44 -05:00
Johannes Schönberger 99484e3a77 Merge pull request #1795 from kevin-keraudren/ransac-linemodel3D 
Adding LineModel3D for RANSAC, unit test and example.
 2015-12-04 17:58:52 -05:00
Kevin Keraudren 0bdf4251c6 documentation updates; added "3D" to example title 2015-12-04 22:25:13 +00:00
Guillaume Lemaitre 0c1fc76f4b Update the reference 2015-12-04 19:27:44 +01:00
Guillaume Lemaitre 54043de4b4 Change the import of round function to be compatible with visual studio compiler 2015-12-04 19:26:38 +01:00
Guillaume Lemaitre 3a2acb2adf Update the documentation with spelling error 2015-12-04 19:26:37 +01:00
Guillaume Lemaitre 4bc1c587ed Add local geometric mean filter 
Add the filter in cython with a specific kernnel.
The implementatio is based on the log-average method.
The test were added the npz.
 2015-12-04 19:26:37 +01:00
Kevin Keraudren 6f9a55c987 added deprecation warning for LineModel and added note in TODO.txt 2015-12-04 08:48:08 +00:00
Kevin Keraudren 61b7c20e03 cleaned tests and documentation, added deprecation note in doc for LineModel. 2015-12-03 22:16:56 +00:00
Kevin Keraudren 6a2961fdee we now have the old LineModel with params (dist, theta), and the new LineModelND with params (origin, direction). 2015-12-03 22:03:10 +00:00
Kevin Keraudren 040a53456d Merged LineModel3D with LineModel in order to form a unified model. 
- model.params holds the legacy params (2D representation),
 - model.new_params holds the true ND line representation.

The proposed LineModel behaves identically as the implementation in master in the 2D case. In the 3D case, it behaves similarly to the previously proposed LineModel3D, as long as new_params is used instead of params. This implementation thus takes advantage that the 2D case is a special case of the ND general model.
 2015-12-02 08:58:16 +00:00