Josh Warner
0295d54235
Merge pull request #656 from josteinbf/doc-makefile
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ENH: Increase configurability of doc/Makefile
2013-07-15 06:58:30 -07:00
Jostein Bø Fløystad
8796262b0b
doc: Allow specifying python binary.
2013-07-15 14:01:10 +02:00
Jostein Bø Fløystad
7e9ae43ae9
docs: Makefile respects variables from environment.
2013-07-15 13:57:35 +02:00
Johannes Schönberger
dc27babee2
Merge pull request #546 from jni/3d-slic
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Add support for 3D images in SLIC segmentation
2013-07-14 23:50:38 -07:00
Juan Nunez-Iglesias
8736a66504
Fix typo using assert_raises in test_colorconv.py
2013-07-13 09:49:38 +10:00
Juan Nunez-Iglesias
858f7411d7
Complete test_regular_grid coverage
2013-07-13 01:34:51 +02:00
Juan Nunez-Iglesias
6221ce6e3b
Add test coverage for guess_spatial_dimensions()
2013-07-13 01:27:17 +02:00
Juan Nunez-Iglesias
f0ecc4d00d
Rename regular_grid.py
2013-07-12 18:28:11 +02:00
Juan Nunez-Iglesias
e80dd18d7e
Add tests for 'regular_grid()'
2013-07-12 18:26:11 +02:00
Johannes Schönberger
f11d5a1c8d
Merge pull request #652 from josteinbf/local-binary-pattern-example
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examples: Avoid python3-specific syntax.
2013-07-12 04:17:15 -07:00
Jostein Bø Fløystad
09cfe0b929
examples: Avoid python3-specific syntax.
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from __future__ import ... is ineffective when the example script is
exec-ed by sphinx, resulting in a SyntaxError when running under
python2.
Fixes gh-649.
2013-07-12 12:52:26 +02:00
Stefan van der Walt
8927147e2c
Merge pull request #645 from josteinbf/iradon-sart-docstring
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iradon_sart: Format docs correctly.
2013-07-10 05:51:17 -07:00
Johannes Schönberger
a50892460c
Merge pull request #648 from stefanv/ransac_faulty_cast
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Fix casting in ransac example.
2013-07-10 04:33:23 -07:00
Stefan van der Walt
89c9b6161d
Fix casting in ransac example.
2013-07-10 12:45:22 +02:00
Stefan van der Walt
8c4b31e28c
Merge pull request #646 from ahojnnes/travis-bento
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Let travis-ci check bento.info.
2013-07-10 03:39:39 -07:00
Jostein Bø Fløystad
4d307f5315
iradon_sart: Fix docstring typo.
2013-07-09 11:44:28 +02:00
Jostein Bø Fløystad
1cc42bd943
iradon_sart: Reformat references.
2013-07-09 11:44:03 +02:00
Johannes Schönberger
0156593fb6
Let travis-ci check bento.info
2013-07-08 20:50:44 +02:00
Johannes Schönberger
dd9f6a16ab
Merge pull request #643 from stefanv/bento_fixes
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Fix Bento build.
2013-07-08 11:41:09 -07:00
Stefan van der Walt
5f62ad55a0
Merge pull request #614 from tonysyu/doc/local-binary-pattern
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Add explanation to LBP example.
2013-07-08 06:52:15 -07:00
Jostein Bø Fløystad
18a06a0add
iradon_sart: Format docs correctly.
2013-07-08 14:50:06 +02:00
Juan Nunez-Iglesias
48d78c09d9
Improve doc for regular_grid.py
2013-07-08 14:41:42 +02:00
Stefan van der Walt
1b4cf9f76d
Fix Bento build.
2013-07-08 13:14:08 +02:00
Stefan van der Walt
47a0cd1a3f
Merge pull request #642 from sciunto/convex_hull_ex
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Doc: Convex hull example. Improvement.
2013-07-08 03:41:22 -07:00
François Boulogne
acdfd8bc71
simplify modification image + comment
2013-07-07 12:21:34 +02:00
François Boulogne
7048a9c995
add original picture
2013-07-07 12:05:30 +02:00
Emmanuelle Gouillart
f3b1b39158
Merge pull request #635 from josteinbf/radon-cleanup
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Clean up radon and iradon to improve readability
2013-07-06 12:14:25 -07:00
Jostein Bø Fløystad
bea50aa608
iradon: use util.pad for sinogram padding.
2013-07-06 20:55:54 +02:00
Jostein Bø Fløystad
b3746b9090
iradon: Cleanup by locating related code in one place.
2013-07-06 20:55:54 +02:00
Jostein Bø Fløystad
643a1bc1f5
iradon: Add test for cubic interpolation.
2013-07-06 20:55:53 +02:00
Jostein Bø Fløystad
b90ba783ef
iradon: Only allow interpolation methods working well.
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Of the interpolation methods provided by scipy.interpolate.interp1d,
only cubic has been found to work well with the tests in skimage (other
methods are either identical to linear or nearest, or they produce bad
reconstructions).
2013-07-06 20:55:53 +02:00
Jostein Bø Fløystad
2be327815e
radon: Use numpy.interp/scipy.interpolate.
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Scipy supports all interpolation kinds (nearest, linear) we need, while
numpy supports only linear interpolation. The numpy interpolation is
substantially faster, so this is used even though it complicates the
code slightly.
2013-07-06 20:55:53 +02:00
Jostein Bø Fløystad
5955e4e612
iradon: Reduce code duplication.
2013-07-06 20:55:53 +02:00
Jostein Bø Fløystad
ac460a9777
iradon: Use util.pad for array padding.
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This depends on util.pad accepting 0s in pad_width, which has a proposed
solution in gh-634.
2013-07-06 20:55:53 +02:00
Jostein Bø Fløystad
237fb989b0
radon: Use util.pad for array padding.
2013-07-06 20:55:53 +02:00
Josh Warner
6edd707a1b
Merge pull request #637 from sciunto/minorfix
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STYLE : PEP8 + import fix in hough_transform tests
2013-07-06 11:06:48 -07:00
Emmanuelle Gouillart
15ed7bdf59
Merge pull request #584 from josteinbf/iradon-algebraic
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SART algorithm for tomography reconstruction
2013-07-06 10:24:24 -07:00
Josh Warner
bf26ce7fae
Merge pull request #640 from sciunto/missingdoc
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DOCFIX: add docstrings to Cython grayscale dilate/erode & make them private funcs
2013-07-06 07:16:09 -07:00
François Boulogne
cf3efba3c1
use previous import
2013-07-06 16:12:09 +02:00
François Boulogne
de9d2662b1
MIN: fix pep8
2013-07-06 14:45:54 +02:00
François Boulogne
f316abbfbe
DOC: add doctrings
2013-07-06 14:34:55 +02:00
François Boulogne
e74b971335
erode & dilate -> private functions
2013-07-06 14:30:17 +02:00
François Boulogne
2dfeab83df
PEP8 + import
2013-07-06 13:49:01 +02:00
Tony S Yu
516d6efa5d
Fix Python 3 incompatibility (also, some wording tweaks)
2013-07-06 00:55:51 -05:00
Josh Warner
e5e0c73755
Merge pull request #634 from josteinbf/arraypad-zeros
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arraypad: allow padding with zero entries (i.e. no padding).
2013-07-05 07:33:10 -07:00
Jostein Bø Fløystad
794a4d7dae
arraypad: allow padding with zero entries (i.e. no padding).
2013-07-05 14:29:09 +02:00
Jostein Bø Fløystad
553767122b
Add SART to contributors.
2013-07-05 13:36:55 +02:00
Jostein Bø Fløystad
3cdfeccc7a
iradon_sart: flip signs to reflect changes to radon.
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The changes to radon were introduced in gh-596.
2013-07-05 13:14:39 +02:00
Jostein Bø Fløystad
af47941435
iradon_sart: fix comment spelling.
2013-07-05 13:14:39 +02:00
Jostein Bø Fløystad
f2790d658c
iradon_sart: redefine projection center.
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This reflects the bugfixes related to issue gh-592 implemented in
gh-596.
2013-07-05 13:14:39 +02:00