Juan Nunez-Iglesias
04536cc7df
Update morphology dtypes tests
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Previously, we were testing that any dtype would get converted to uint8
and then correctly processed. Now, since we are using ndimage, we are
directly processing all dtypes. I've updated the tests accordingly.
2015-01-22 11:29:08 +11:00
Juan Nunez-Iglesias
1fa6904c04
Workaround for strange ndimage selem inversion
2015-01-22 11:29:08 +11:00
Juan Nunez-Iglesias
8ffed5e424
Wrap scipy.ndimage binary morphology functions
2015-01-22 11:29:08 +11:00
Juan Nunez-Iglesias
56764f8209
Wrap scipy.ndimage grey morphology functions
2015-01-22 11:29:08 +11:00
Stefan van der Walt
9b16b35d96
Merge pull request #1318 from blink1073/pyqt5
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Update viewer for PyQt5 compatibility
2015-01-21 13:27:40 -08:00
Stefan van der Walt
cd700594aa
Merge pull request #1339 from jni/slic-doc
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Update documentation and behaviour in SLIC
2015-01-18 23:45:48 -08:00
Juan Nunez-Iglesias
72125aac07
Add underscore for ReST reference
2015-01-19 09:03:30 +11:00
Steven Silvester
530ffa94f3
Merge pull request #1341 from JDWarner/cover_pad
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ENH: Fully cover `pad` and backports from NumPy 0.10dev
2015-01-16 23:33:39 -06:00
Josh Warner (Mac)
aa2215ccfc
ENH: Fully cover pad and backports from NumPy 0.10dev
2015-01-16 21:54:02 -07:00
Juan Nunez-Iglesias
62d6a3d7e9
Merge pull request #1340 from blink1073/fix-filter-pkg-shim
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Fix Filter Package Shim Implementation
2015-01-16 15:23:45 +11:00
Steven Silvester
6339eff8fe
Fix filter package shim implementation
2015-01-15 21:17:40 -06:00
Juan Nunez-Iglesias
879a7b0bb5
Update treatment of convert2lab in slic
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It still defaults to `True` but only when the last dimension of the
input array could be construed as RGB.
Also, update ValueError description in docstring.
2015-01-16 13:11:25 +11:00
Juan Nunez-Iglesias
c102a0bf0e
Add reference to SLIC0 in SLIC docstring
2015-01-16 12:08:13 +11:00
Stefan van der Walt
ecfdc9118a
Merge pull request #1338 from blink1073/imshow-fixes
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Update Matplotlib plugin docstring. Create test module setup function.
2015-01-15 17:01:09 -08:00
Steven Silvester
87998d6518
Update docstring and create test module setup function
2015-01-15 18:57:18 -06:00
Steven Silvester
c3ccb60bda
Merge pull request #1300 from jni/io-imshow-data
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WIP: overhaul matplotlib imshow plugin for new data policy
2015-01-15 18:39:05 -06:00
Juan Nunez-Iglesias
61d9812cd8
Don't create superfluous ip variable
2015-01-15 23:31:51 +11:00
Juan Nunez-Iglesias
5d115209b5
Create new figure for each imshow test
2015-01-15 23:07:09 +11:00
Juan Nunez-Iglesias
7b2dbcb15b
Expand the docstring for imshow
2015-01-15 22:39:50 +11:00
Juan Nunez-Iglesias
c6dff6942d
Don't create new plot automatically
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This behavior is a bit too magical and may interfere with creation of
interactive ImageCollection browsers, for example.
2015-01-15 22:26:55 +11:00
Juan Nunez-Iglesias
e472009090
Add test for signed images
2015-01-15 22:26:17 +11:00
Juan Nunez-Iglesias
2bdd239496
Overhaul imshow to clarify flow
2015-01-15 22:25:41 +11:00
Juan Nunez-Iglesias
30c522e706
Use different colormaps depending on input image
2015-01-15 20:16:24 +11:00
Juan Nunez-Iglesias
400c3fd202
Rename ax to ax_im in mpl imshow plugin
2015-01-15 15:44:55 +11:00
Juan Nunez-Iglesias
9fe4f33793
Add tests for nonstandard images
2015-01-14 20:29:15 +11:00
Juan Nunez-Iglesias
176889933f
Add tests for io.imshow mpl plugin
2015-01-14 20:13:32 +11:00
Juan Nunez-Iglesias
984e22b47a
Replace Axes with AxesImage where relevant
2015-01-14 20:13:32 +11:00
Juan Nunez-Iglesias
fab4ff2305
Fix incorrect call to colorbar
2015-01-14 20:13:32 +11:00
Juan Nunez-Iglesias
c68c8e5468
Improve mpl imshow plugin docstring
2015-01-14 20:13:32 +11:00
Juan Nunez-Iglesias
fac8fde9dc
Overhaul matplotlib imshow plugin
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- images are displayed within their native dtype range,
- unless they are outside of their range (e.g. a float image with
values greater than 1) or they are of an unsupported dtype (e.g.
a uint64 image), in which case the dynamic range of the display
corresponds to the image range,
- which is also done for images with extremely low contrast for their
native range (e.g. float images in [1e-7, 5e-7].
In the latter two cases, a colorbar is also displayed and a warning is
raised.
Finally, we return the axes object on which the image is plotted, to
enable further plotting in the matplotlib new OO style.
2015-01-14 20:13:32 +11:00
Juan Nunez-Iglesias
8f4d0247b5
Add docstring to matplotlib imshow plugin
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The image is now named as an argument, and the axes are returned, in
keeping with matplotlib convention.
2015-01-14 20:13:32 +11:00
Stefan van der Walt
e030e8c4c6
Merge pull request #1337 from jni/fix-label2rgb
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Fix `label2rgb` by adding default background color
2015-01-13 16:08:40 -08:00
Juan Nunez-Iglesias
eab2168846
Add test to ensure default bg_color in label2rgb
2015-01-14 10:05:22 +11:00
Juan Nunez-Iglesias
9438b96774
Add default bg_color to label2rgb
2015-01-14 09:59:15 +11:00
Steven Silvester
d24ce2b4ab
Merge pull request #1328 from pratapvardhan/misc-doc
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DOC: Update bootstrap sphnix links
2015-01-01 19:28:23 -06:00
Steven Silvester
d714d0bcbc
Separate qt version check from has_qt flag
2014-12-30 21:01:23 -06:00
Steven Silvester
7da4d5a19a
Merge pull request #2 from flying-sheep/pyqt5
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fixed Qt5 compat
2014-12-30 20:57:13 -06:00
Phil Schaf
14a2b5d8f3
fixed Qt5 compat
2014-12-30 17:57:19 +01:00
Pratap Vardhan
d3f2d11230
DOC: Update bootstrap sphnix links
2014-12-28 16:26:27 +05:30
Steven Silvester
51ab675d3c
Fix lingering merge issue
2014-12-27 11:11:36 -06:00
Steven Silvester
f89ab053e1
Merge pull request #1314 from SalvatoreScaramuzzino/RectTool_docs
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Rect tool docs
2014-12-27 11:01:08 -06:00
Steven Silvester
67fadc0ed8
Fix mock Qt objects again
2014-12-27 10:54:19 -06:00
Steven Silvester
42b330e562
Add QWidget to the mock Qt
2014-12-27 10:54:19 -06:00
Steven Silvester
8da175d70e
Add dummy Qt properties
2014-12-27 10:54:19 -06:00
Steven Silvester
c3ade4416f
Instantiate QtCore dummy class
2014-12-27 10:54:18 -06:00
Steven Silvester
7474db1f0d
Another fix for dummy Signal
2014-12-27 10:54:18 -06:00
Steven Silvester
6d445776c9
Fix the dummy Signal
2014-12-27 10:54:18 -06:00
Steven Silvester
11c6a9f86a
Fix another viewer import
2014-12-27 10:54:18 -06:00
Steven Silvester
2eee1faaff
Fix import error in viewer.utils.core
2014-12-27 10:54:18 -06:00
Steven Silvester
6f57873526
Do not use ImportError behaviour in viewer
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Conflicts:
skimage/viewer/tests/test_tools.py
2014-12-27 10:54:13 -06:00