0fde67bb56
TEST: added test for num_peaks kwarg in peak_local_max.
2013-03-18 15:13:18 +00:00
44095eef81
FIX: number of peaks returned from feature.corner_peaks
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corner_peaks accepted a num_peaks argument, but the call
to peak_local_max inside the function used np.inf instead
of the value of this keyword argument, leading to an unbounded
number of peaks being returned.
2013-03-15 18:50:43 +00:00
a41d74caa4
Merge pull request #441 from spotter/color_deconv
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ENH: Adding color deconvolution for immunohistochemical images.
2013-03-14 06:04:22 -07:00
f956f3257d
FIX: Added myself in CONTRIBUTORS.txt
2013-03-14 13:59:15 +01:00
d0a15a7cf9
FIX: Example in combine_stains docstring.
2013-03-13 15:14:39 +01:00
bad3915d2a
Merge pull request #463 from ahojnnes/pdf-docs
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DOC: Fix LaTeX documentation.
2013-03-13 07:02:38 -07:00
b75776cc2e
ENH: Updated stain separation function docstrings and added matrices to __all__
2013-03-13 14:35:16 +01:00
5e67572ac7
Do not set paper size to allow manual setting through make
2013-03-13 12:16:58 +01:00
1d9fb145f6
Avoid duplicate python module index
2013-03-13 12:09:39 +01:00
169d945534
Fix make.bat
2013-03-13 12:08:08 +01:00
d68515f0d8
Copy some useful latex settings from NumPy
2013-03-13 12:03:44 +01:00
3f31b48fe1
Use plot_directive from matplotlib.sphinxext if available
2013-03-13 11:10:03 +01:00
97d7f88b04
Explicitly set latex font size and paper size
2013-03-13 11:08:02 +01:00
16863535eb
Re-enable plots in doc strings and generate PDF images for them
2013-03-13 10:59:26 +01:00
74acdc9fa9
FIX: changed unicode dash in docstrings.
2013-03-12 17:09:17 +01:00
08668156c2
Merge pull request #462 from ahojnnes/deprecated-doc-string
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DOC: Change deprecated decorator to display warning in doc string.
2013-03-12 08:42:31 -07:00
6f7158046f
FIX: combine_stains docstring.
2013-03-12 16:41:02 +01:00
b3e557b550
FIX: using the new stain separation functions for the special case of hed.
2013-03-12 16:19:51 +01:00
c43986d6d6
ENH: Adding tests for new stain separation functions.
2013-03-12 16:15:41 +01:00
f48097c5ca
FIX: fixed docstrings. ENH: Added new stain separation matrices.
2013-03-12 16:06:32 +01:00
20f27345c3
FIX: rgb2hed and hed2rgb can work with both signed and unsigned image.
2013-03-12 14:22:53 +01:00
0324737c47
Fix some doc strings for latex docs
2013-03-12 09:39:42 +01:00
a1ad4ca34b
Change latex doc settings
2013-03-12 09:39:00 +01:00
b82764583a
Increase list-depth for nested quotes etc.
2013-03-12 09:36:33 +01:00
d01b14f2ff
Add API documentation to latex docs
2013-03-12 09:12:13 +01:00
332c21f979
Make deprecation warning in doc string bold
2013-03-12 07:29:39 +01:00
a0d9d3f213
Use double instead of single quotes for doc string
2013-03-12 07:28:15 +01:00
0cb0fee339
Remove duplicate code for alternative function
2013-03-11 23:21:52 +01:00
483ebae0c0
Change deprecated decorator to display warning in doc string
2013-03-11 23:18:54 +01:00
0fd2f355b2
FIX: Link to Ruifrok reference
2013-03-11 21:02:24 +01:00
dd597fc526
Merge pull request #460 from jni/raise-type
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BUG: Revert `remove_small_objects` to raise TypeError.
2013-03-10 21:42:45 -07:00
b306f9b70f
Revert remove_small_objects to raise TypeError
2013-03-10 19:23:04 +11:00
5b25e7e961
FIX: Replaced non-ascii double quotes in Ruifrok reference.
2013-03-09 13:23:36 +01:00
f66c8b5e3b
ENH: Added example to the gallery for ihc staining separation
2013-03-08 15:59:40 +01:00
7c371e1662
FIX: img_as_ubyte function threw ValueError due to floating point errors in hed2rgb function.
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Clipping the output of the hed2rgb function between 0 and 1 seems to correct
the bug without affecting the conversion quality.
2013-03-08 12:58:22 +01:00
d7d87c9461
Merge pull request #390 from tonysyu/canvastools
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ENH: Major overhaul of canvastools.
2013-03-07 23:18:30 -08:00
b83e4e9177
Merge pull request #457 from tonysyu/logo_refactor
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RF: Refactor code that generates scikit-image logo.
2013-03-07 10:02:08 -08:00
dad1cdbd5b
Merge pull request #4 from stefanv/tonysyu_logo_refactor
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STY: PEP8 for logo.
2013-03-07 06:44:43 -08:00
ad0927f459
STY: PEP8 for logo.
2013-03-07 08:29:21 +02:00
70e37f3055
Refactor code that generates scikit-image logo.
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Simplify code and use skimage functions that didn't exist when this code was
originally written.
2013-03-06 23:03:01 -06:00
7439fe96e8
FIX: Testing for ubyte and float images. Input dtypes are converted beforehand.
2013-03-07 00:14:06 +01:00
5955937131
Merge pull request #456 from cgohlke/patch-2
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Fix MSVC error C2036: 'void *' : unknown size
2013-03-06 14:09:07 -08:00
45f53c9e3a
Fix MSVC error C2036: 'void *' : unknown size
2013-03-06 10:09:59 -08:00
387c72b018
Remove colon as multi-line comment symbol
2013-03-06 16:43:41 +01:00
44350f56c9
Fix vectorized_ops for bento
2013-03-06 16:42:18 +01:00
d548003bdf
Merge pull request #455 from thouis/ctmf_unaligned_segv
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BUG: Not all histogram memory was aligned correctly.
2013-03-06 05:00:09 -08:00
e6ee2c0db6
BUG: not all histogram memory was aligned correctly
2013-03-05 18:32:09 -05:00
2335f60954
Merge pull request #454 from ahojnnes/release-announcements
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DOC: Add mailing list adresses to release instructions.
2013-03-05 02:26:52 -08:00
631a3bc687
Add release instruction to update dev docs
2013-03-05 08:55:37 +01:00
a4654b4b45
Add mailing list adresses to release instructions
2013-03-05 08:51:30 +01:00
Malcolm Reynolds