Commit Graph

7792 Commits

Author SHA1 Message Date
Vighnesh Birodkar 22bf68d9b4 removed failing doctest line 2016-01-08 21:49:01 -05:00
Vighnesh Birodkar 753c8caf4e correct variable name mistake 2016-01-08 14:11:56 -05:00
Vighnesh Birodkar 79c9637e11 Merge pull request #1 from jni/edge-rag-fixup
Edge rag modifications
2016-01-08 13:30:57 -05:00
Juan Nunez-Iglesias 802214d5ac Hold pixel count in mean boundary RAG edges
This value is needed to combine edges when merging nodes.
2016-01-08 22:11:31 +11:00
Juan Nunez-Iglesias 30145ab7f4 Use function to update graph edges from CSR 2016-01-08 22:10:20 +11:00
Juan Nunez-Iglesias f9dfa1d81d Make mean boundary RAG testing more robust 2016-01-08 17:25:10 +11:00
Vighnesh Birodkar def8ca7f75 change mcap to viridis 2016-01-06 21:29:42 -05:00
Vighnesh Birodkar 772d1ccc15 changed colormap to jet 2016-01-06 20:23:55 -05:00
Vighnesh Birodkar a4a406349b moved example file 2016-01-06 19:58:40 -05:00
Vighnesh Birodkar ea18fcb99b use as strided 2016-01-06 16:23:43 -05:00
Vighnesh Birodkar a5f6db59cb doc example 2016-01-06 15:42:10 -05:00
Vighnesh Birodkar 422dfc6c22 cleanup 2016-01-06 15:17:48 -05:00
Vighnesh Birodkar e8f2805d64 changed to eosion/dilation logic 2016-01-06 15:07:35 -05:00
Vighnesh Birodkar a95c0bdddc passing selem argument 2016-01-06 15:07:35 -05:00
Vighnesh Birodkar 4c05e65670 changed logic to use erosion/dilation 2016-01-06 15:07:35 -05:00
Vighnesh Birodkar 4041fc6354 corrected colors import 2016-01-06 15:06:18 -05:00
Vighnesh Birodkar caba3041d1 indentation correction 2016-01-06 15:06:18 -05:00
Vighnesh Birodkar 3cf6c8b1ce removed unnecessary statement 2016-01-06 15:06:18 -05:00
Vighnesh Birodkar 1769cdddcf added boundary rag construction 2016-01-06 15:06:18 -05:00
Emmanuelle Gouillart 8f2839e1b3 Merge pull request #1747 from JGoutin/OptimizeLevel2Compilation-patch
Import fail if python is running with -OO
2015-12-30 23:14:03 +01:00
Emmanuelle Gouillart 33a2182e06 Merge pull request #1705 from deledalle/ref_nlmeans
DOC : add ref to nlmeans
2015-12-30 22:06:19 +01:00
Emmanuelle Gouillart 732df5fc55 Merge pull request #1850 from jwiggins/fix/potential-bilateral-leak
FIX: Move a argument check to avoid leaking malloc'd arrays.
2015-12-30 21:43:18 +01:00
Juan Nunez-Iglesias 2e812e0b12 Merge pull request #1505 from emmanuelle/regionprops3d
Add preliminary and incomplete 3D support to regionprops.
2015-12-29 11:59:48 +11:00
emmanuelle 6c9325aadf Minor fixes: errant indent, functools.wraps and python3 style 2015-12-28 21:13:22 +01:00
John Wiggins 72f542100e Use np.empty() instead of malloc/free in _denoise_bilateral. 2015-12-27 23:29:59 -06:00
Steven Silvester 99871d77b4 Merge pull request #1849 from emmanuelle/fix_contribs
contribs.py: fixed the case of empty string
2015-12-27 10:14:48 -06:00
emmanuelle f345291e54 Mentioned 2.6 hack for contribs.py in TODO.txt 2015-12-27 17:00:28 +01:00
emmanuelle 13c4f3cea4 Execute contribs.py in travis_script.sh
Added tag of previous release

Only recent commits for contribs.py so that Travis is happy

Do not execute contribs.py for Python 2.6

Do not execute contribs.py for python 2.6
2015-12-26 23:52:39 +01:00
John Wiggins e528d47d5b FIX: Move a argument check to avoid leaking malloc'd arrays. 2015-12-26 10:55:28 -06:00
emmanuelle 76ad56fa83 contribs.py: fixed the case of empty string 2015-12-25 14:16:03 +01:00
emmanuelle fab4265f47 Removed @property decorator, that made _install_properties_doc crash 2015-12-25 12:37:41 +01:00
emmanuelle add3352284 Euler number is only2d 2015-12-25 11:38:23 +01:00
Juan Nunez-Iglesias 9317b7be34 Make area a cached property; use np.sum 2015-12-24 19:02:15 +01:00
Juan Nunez-Iglesias d8cc148d8c Replace individual errors by 2D decorator 2015-12-24 19:00:43 +01:00
emmanuelle 0359284623 Modified some methods in _RegionProperties class to make them
dimension-agnostic. Removed the NotImplementedError for 3-D images in
regionprops function.
2015-12-24 18:56:49 +01:00
emmanuelle e1751f91e2 Some PEP8 in test module 2015-12-24 18:52:57 +01:00
Steven Silvester f3392bc4f5 Merge pull request #1848 from soupault/doc_edge_modes
DOC: plot_edge_modes improvement
2015-12-24 10:28:59 -06:00
Egor Panfilov 18a2747239 DOC: plot_edge_modes improvement, closes #1816 2015-12-24 18:17:28 +03:00
Emmanuelle Gouillart 98d2446594 Merge pull request #1806 from JDWarner/sphinx_formatting
STY: Fix formatting and use tight_layout in doc examples.
2015-12-24 10:47:31 +01:00
Emmanuelle Gouillart d4b3aeeed3 Merge pull request #1846 from arokem/hull-docs
DOC: Small one. The input to this one needs to be 2D.
2015-12-24 10:34:00 +01:00
Emmanuelle Gouillart 6740ef9849 Merge pull request #1842 from jni/1840
Specify 2D images in denoise bilateral docstring
2015-12-24 09:59:11 +01:00
Josh Warner (Mac) 9b9473c6a1 STY: Fix formatting and use tight_layout in doc examples. 2015-12-23 20:53:51 -05:00
arokem 9fb5f1333d TST: Test both functions(!). 2015-12-23 15:36:35 -08:00
Stefan van der Walt cc8c3b7687 Merge pull request #1847 from emmanuelle/remove_label_from_morphology
Remove deprecated label function from morphology module in preparation for 0.12 release
2015-12-23 15:01:46 -08:00
arokem 436d0e8ca3 TST: Test error handling in convex_hull, convex_hull_object.
Also, a few PEP8 fixes in both module and tests.
2015-12-23 14:57:44 -08:00
arokem 227211fec7 DOC: Small one. The input to this one needs to be 2D. 2015-12-23 14:24:52 -08:00
emmanuelle 0b61b8f46f Removed deprecated label function from morphology module in preparation
for 0.12 release.
2015-12-23 23:24:22 +01:00
Emmanuelle Gouillart 4a07a3c9ad Merge pull request #1810 from alexandrejaguar/master
Solving white space + improving code +PEP8
2015-12-23 23:14:32 +01:00
Emmanuelle Gouillart 4509338aac Merge pull request #1777 from stevendbrown/rp_intensity_check
Added label vs. intensity shape checking to regionprops
2015-12-23 22:34:59 +01:00
Johannes Schönberger c5f9fffaad Merge pull request #1844 from emmanuelle/fix_euler
Fix euler
2015-12-23 21:56:46 +01:00