2f05992148
Expand on skimage support for 3D processing
2015-01-22 13:01:04 +11:00
64f00bb860
Add note on 5D images
2015-01-22 12:49:28 +11:00
6eb8b0d079
Add table summarising image types
2015-01-22 12:47:44 +11:00
110ac37dc4
Add doctest skip directives to timing calls
2015-01-22 11:57:49 +11:00
097f8eaaa0
Space comment and code in plot directive call
2014-12-31 17:09:36 +11:00
e4d91d1c9f
Give 3D image examples
2014-12-31 17:07:28 +11:00
f9b5f44faa
Clarify boolean masks on color images
2014-12-31 17:07:28 +11:00
9c770dbdf2
Prefer row/col to r/c when talking about circles
2014-12-31 17:07:28 +11:00
ad2b02b865
Label transpose operation for clarity
2014-12-31 17:07:28 +11:00
0dd81de567
Add paragraph about data locality
2014-12-31 17:07:28 +11:00
4a04a6c90c
Fix and add output for timing calls
2014-12-31 17:07:28 +11:00
53585641d2
Finish code snippet for timings
2014-12-31 17:07:28 +11:00
76103d4b05
Define 'prefetching' for users
2014-12-31 17:07:28 +11:00
b998405f48
Replace 'level' and 'plane' with 'frame'
2014-12-31 17:07:28 +11:00
0b779588b0
Restore NumPy from Numpy, grudgingly
2014-12-31 17:07:28 +11:00
5520ccdef3
Initial work on array dimension naming guide
2014-12-31 17:07:27 +11:00
f89ab053e1
Merge pull request #1314 from SalvatoreScaramuzzino/RectTool_docs
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Rect tool docs
2014-12-27 11:01:08 -06:00
6f1eb316d2
Merge pull request #1325 from blink1073/remove-label-shim
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Remove unnecessary `measure.label` shim
2014-12-27 15:21:59 +11:00
b7f4f61ae7
Remove unnecessary measure.label shim
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Conflicts:
skimage/measure/_label.py
2014-12-26 21:34:33 -06:00
7b5dd3b700
Merge pull request #1313 from blink1073/suppress-test-warnings
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Handle expected test warnings.
2014-12-27 14:26:59 +11:00
ecc582193a
Try using matplotlib cleanup decorator
2014-12-26 20:55:44 -06:00
a7a84bbcde
Draw the canvas when creating the ax to avoid RuntimeError
2014-12-26 20:14:41 -06:00
f898bd0209
Style fixes
2014-12-26 11:26:30 -06:00
9c2807ac01
Merge pull request #1321 from ahojnnes/hough
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Use typed memoryviews in Hough Transform
2014-12-27 00:38:38 +11:00
ac52af7d83
removed numpy import and spaces
2014-12-26 12:12:15 +01:00
0c2773b9e4
Use typed memoryviews
2014-12-26 11:08:05 +01:00
d28ae513ca
Travis auto-build Doctest skipped to avoid window opening
2014-12-26 10:37:03 +01:00
736f5658bc
Fix indent in docstring example
2014-12-25 17:08:36 -06:00
d760c0adda
Fix scipy.sparse.sparsetools warning
2014-12-24 11:20:52 -06:00
bea57315fb
Update docstring and fix pyamg warning check
2014-12-24 09:10:11 -06:00
23ae571689
Fix final failing test on Py2.6 build
2014-12-24 08:49:51 -06:00
2e0deb9595
Fix syntax error and missing | operator
2014-12-24 07:47:05 -06:00
d37ccca598
Fix Py2.7 build errors
2014-12-24 06:54:56 -06:00
4453120d96
Allow warnings in the minimum build
2014-12-24 06:36:04 -06:00
2a6b4ccaea
Import scipy.sparse in setup_test
2014-12-24 06:34:13 -06:00
cb2745cfdf
Change default neighbors to None
2014-12-24 05:57:37 -06:00
3829401e9f
Fix label wrapper function
2014-12-23 21:20:23 -06:00
2d3ada19e5
Allow for no exceptions to be raised and cleanup
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Allow for no exceptions to be raised
Add some helpful comments
Remove doctest skips
Remove TODO note
Cleanup and skip failing doctest
2014-12-23 16:51:18 -06:00
c0a0490eed
Fix handling of multiple warnings and update tests
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Fix handling of multiple warnings
Update all test __init__ files
Update segmentation pkg
Update the color pkg
Update the exposure pkg
Update the filters pkg
Update the io pkg
Update the measure pkg
Update morphology package
Restructure test setup function
Add expected_warnings to __all__
Update restoration pkg.
Remove explicit filter check since it is done elsewhere
Fix the image test helpers
Update the transform pkg
Fix util pkg
Update viewer pkg
2014-12-23 16:51:06 -06:00
01ca1d17c8
Add a random seed to the setup
2014-12-23 16:51:04 -06:00
1b905d4cef
More cleanup and updating of tests
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Clean up setup_test and add a teardown_test method
Implement new setup/teardown in novice tests
Fix warning handling in pil_plugin
Update rank tests
2014-12-23 16:50:50 -06:00
a4e4e57ba5
Create new expected_warnings helper and some cleanup
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Add new helper function for expected warnings during test
Indentation cleanups and avoid skipping doctests if possible.
2014-12-23 16:50:18 -06:00
782ba46a4c
Handle more warnings
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Punt on the issue of warnings with the minimum build
Handle warnings in measure pkg
Fix the rank filter test by forcing a random seed in the function
Compare as boolean in imread test
Import loadmat in test_setup to avoid warning
Use a setup method for imread plugin test
Revoke unintended changes
Fix indentation to appease jni
More indentation fixes
Fix unintentional comment out
2014-12-23 16:49:59 -06:00
6db92d387b
More doctest and pil_plugin fixes
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Fix Python2 imread in pil_plugin.
Load from data
Use all_warnings when importing the other packages
More fixes for regionprops doctest
2014-12-23 16:49:38 -06:00
4680f30466
Add a test setup helper function
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Add a function to set up a skimage test
Switch to new test helper function
Import local packages that raise warnings in test setup function
More fixes to doctests
Fix regionprops doc test
Try and fix the test_rank failure.
Remove no longer needed RectangleSelector shim
Skip more doctests in _regionprops
Try importing another scipy subpackage
2014-12-23 16:49:20 -06:00
f72882fbd2
Import scipy before turning on warnings
2014-12-23 16:49:19 -06:00
542cd4fabe
Fix some doctest warnings
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Fix doctest errors
Suppress warnings when importing scipy.ndimage for the first time
2014-12-23 16:49:01 -06:00
2756358f3c
Clean up PIL plugin and handle more warnings
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Use the pil plugin to load data files
Fix install_requires string formatting
Dead end commit
Make all tools executable
Remove debug print
Suppress PIL resourcewarnings
Handle a few more warnings
2014-12-23 16:48:38 -06:00
79c648b14c
Accommodate upcoming changes to RectangleSelector API
2014-12-23 16:48:37 -06:00
0debedd82c
Handle more warnings and reset io plugins as needed
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Reset plugins prior to running collections test
Handle warnings in morphology pkg
Add __init__ for morpohology tests
Handle warnings for novice pkg
Handle warnings for restoration pkg
Handle warnings for segmentation pkg
Handle warnings for _shared pkg
Handle warnings for transform pkg
Handle warnings for util pkg
Handle warnings in viewer module
2014-12-23 16:48:16 -06:00
Juan Nunez-Iglesias