0644026250
Fixed two tests that were failing because of draw imports
2012-08-27 12:04:30 +02:00
7d8bc48378
ENH: Change assert statement for better error output
2012-08-26 16:36:28 -04:00
8084faf1f6
BUG: Fix division error for Python 3
2012-08-26 16:33:25 -04:00
69207c003b
BUG: fix import of rank_order
2012-08-25 14:06:20 -04:00
e350db23a2
Change reconstruction to support Cython 0.15.
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This removes use of Cython's typed memoryviews.
This reverts commit b5d9106966
2012-08-25 14:04:48 -04:00
ce423e169e
Merge pull request #257 from ahojnnes/shared
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ENH: Add shared package.
2012-08-25 10:35:29 -07:00
544fec7560
Merge pull request #215 from tonysyu/morph-reconstruction
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ENH: Add morphological reconstruction.
2012-08-25 07:42:36 -07:00
945349f963
DOC: Improve description of reconstruction
2012-08-25 08:48:03 -04:00
878554ac35
Fix indentation
2012-08-21 15:45:18 +02:00
c471d475eb
Refactor pnpoly function in Cython and add to shared package
2012-08-21 15:43:26 +02:00
1c3aeec2a8
BUG: Remove uses of xrange for py3 compatibility.
2012-08-20 15:25:40 -07:00
39569e8f9e
Merge pull request #256 from NeilYager/skeleton_fix
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BUG: Fix skeletonize LUT.
2012-08-20 14:50:51 -07:00
b4fa79d6dd
Merge pull request #206 from amueller/felsenzwalb
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ENH: MRG Segmentation algorithms.
2012-08-20 14:43:33 -07:00
d7d1faec46
Fix bug in skeletonize LUT
2012-08-20 21:56:10 +01:00
682f064f86
DOC: Fix docstring to match rank order.
2012-08-19 16:23:14 -04:00
b5d9106966
ENH: Use Cython data types instead of Numpy dtypes.
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Conversion to Memoryviews didn't improve performance, unfortunately. Minor slow-down of 5--10%.
2012-08-19 11:56:16 -04:00
b614b34eab
ENH: Add test of reconstruction by erosion.
2012-08-18 23:20:49 -04:00
79fca0e20d
DOC: Reorder docstring sections.
2012-08-18 21:54:06 -04:00
ab7626da3d
STY: Rename variables for clarity.
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In particular, it wasn't clear whether `image` was the seed image or the mask image rnd `values` was used to refer to both image intensity values and their rank-order.
2012-08-18 21:41:01 -04:00
7a56a7f35e
DOC: Clarify code comments and docstring
2012-08-18 18:04:01 -04:00
969772c036
ENH: Add reconstruction by erosion.
2012-08-18 17:59:44 -04:00
29c84a8a7b
STY: Rename returned image to distinguish input from output.
2012-08-17 23:02:08 -04:00
33a19a8c7b
DOC: add comments to clarify algorithm
2012-08-17 22:48:02 -04:00
90e61e22ae
Merge pull request #240 from tonysyu/rename-duplicates
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BUG: Rename modules with duplicate function names.
2012-08-16 23:01:48 -07:00
1ea41173b8
BUG: Rename files with similar function, python module, and cython extension names.
2012-08-16 22:42:27 -04:00
6ead3097c2
cast input of image label function
2012-08-10 09:10:06 +02:00
9cea60d817
STY: minor PEP8 change
2012-08-09 09:49:22 -04:00
e4dd658daf
STY: PEP8 and other clean up.
2012-08-09 00:23:58 -04:00
70153abb83
BUG: fix import of Cython extension.
2012-08-09 00:15:42 -04:00
8fa5427afc
FIX build problem and cython problem resolved.
2012-08-03 11:37:11 +01:00
e2d60f0135
ENH using union find from morphology module
2012-08-03 11:37:10 +01:00
25efae8269
Add morphological reconstruction with test and example.
2012-07-13 00:53:51 -04:00
46e959a9d9
COSMIT some manual pep8, removed unused imports, removed unused variables and fixed a bug in a ValueError statement.
2012-06-29 11:27:23 +02:00
f7c56202d0
COSMIT no spaces around power `**`. Fun: https://gist.github.com/1671995
2012-06-29 11:27:23 +02:00
f7b3d8062c
COSMIT pep8
2012-06-29 11:27:23 +02:00
944f79cdce
BUG: Fix background labelling for case when (0, 0) belongs to the background.
2012-06-12 09:51:16 -07:00
dc6c3d0222
Rename test module to match module.
2012-05-03 17:45:36 -04:00
9358d785c3
Add __all__ to grey module.
2012-05-03 17:44:08 -04:00
136a020088
Remove unused variable.
2012-05-03 17:42:39 -04:00
0edefedc50
Replace import * with import grey.
2012-05-03 17:35:11 -04:00
8fb597b141
Fix dtype compatibility for functions in morphology.grey
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Cast input images using ``img_as_ubyte``. Note, tests don't currently pass for integer arrays (test skipped).
2012-05-03 16:22:00 -04:00
284753a7a4
Make test module runnable.
2012-05-03 16:21:59 -04:00
cfa9bbfc40
Rename greyscale morphology functions.
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Remove "greyscale" prefix on functions in ``morphology.grey``. To avoid confusion (and name clashes), ``greyscale_open`` and ``greyscale_close`` were renamed ``opening`` and ``closing`` (instead of ``open`` and ``close``). As a bonus, these names match scipy.ndimage.
2012-05-03 16:21:59 -04:00
29a2fc3c22
Remove unused imports
2012-05-03 16:21:59 -04:00
e99f18be5a
BUG: Fix imports for Python 3.2.
2012-03-03 11:18:16 -08:00
5c9c8c1867
DOC: Fix Other Parameters section.
2012-02-08 13:07:37 -08:00
7efb0988b0
Fixed 2 typos and 2 wrong argument types in the docs.
2012-02-07 17:21:36 +01:00
118cd49c18
Merge pull request #105 from stefanv/label_cleanup
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ENH: Allow choice between 4 and 8 neighbor mode. Improve documentation.
2012-02-03 21:12:47 -08:00
e18fb678ec
ENH: Cleanups as suggested by Tony.
2012-02-03 20:31:02 -08:00
b9d6090c5e
Cross-See also in watershed and random walker
2012-01-17 22:17:15 +01:00
Emmanuelle Gouillart