Commit Graph

7334 Commits

Author SHA1 Message Date
Josh Warner 46cbff8c2e Merge pull request #1638 from ahojnnes/doc-fixes
DOC: Docstring fixes for recently merged code
2015-08-20 21:06:32 -05:00
Johannes Schönberger ec64872fd5 Some doc string fixes for recently merged code 2015-08-20 19:08:54 -04:00
Johannes Schönberger 236aa208fe Merge pull request #1583 from grlee77/fix_interp_modes
FIX:  bug in 'reflect' and 'wrap' coordinate mapping
2015-08-20 18:53:11 -04:00
Juan Nunez-Iglesias 3959ce3ea7 Merge pull request #1636 from ahojnnes/moments
Improve documentation of moments functions
2015-08-20 01:44:14 +02:00
Johannes Schönberger d4641a436a Improve documentation of moments functions 2015-08-19 14:11:39 -04:00
Gregory R. Lee 49b4f69ac0 MAINT: remove unused import 2015-08-18 12:22:10 -04:00
Stefan van der Walt 9d3bb8f1c1 Merge pull request #1634 from JDWarner/imsave_no_squeeze
FIX/STY: Remove magic and enforce PEP8 in plugins.
2015-08-15 15:53:16 -07:00
Gregory R. Lee beff4d5845 DOC: update TODO.txt to mention eventual removal of _mode_deprecations 2015-08-14 10:10:50 -04:00
Gregory R. Lee 1303317512 BUG: fix one additional location where ndimage mode conversion was needed 2015-08-14 09:38:02 -04:00
Stefan van der Walt 621a8f37f1 Merge pull request #1633 from JDWarner/fix_travis_networkx
FIX: Require networkx 1.9.1 for the 2.6 build
2015-08-13 23:04:14 -07:00
Gregory R. Lee c7a82f8ceb MAINT: minor spacing issues and typos fixed 2015-08-13 23:39:56 -04:00
Gregory R. Lee 81764d8ed5 BUG: update the edge modes in the example to match the current naming convention 2015-08-13 23:39:56 -04:00
Gregory R. Lee 81ea7a6e34 MAINT: All modes in _shared.interpolation.pxd were changed to be consistent with numpy.pad naming conventions. Specifically 'nearest' was changed to 'edge' and 'mirror' was changed to 'reflect'. All functions with a mode argument that rely on these functions had their inputs changed accordingly. For now there is a deprecation warning if the user supplies mode 'nearest'. Mode 'mirror' never appeared in an official release of skimage and so has no corresponding deprecation warning. 2015-08-13 23:39:55 -04:00
Gregory R. Lee 8e3b6bc9da MAINT: convert additional numpy.pad mode names to their dask.array equivalents 2015-08-13 23:39:55 -04:00
Gregory R. Lee f45a72ee1f BUG: fix import in plot_edge_modes.py 2015-08-13 23:39:55 -04:00
Gregory R. Lee 75edad1448 BUG: fix bento.info again 2015-08-13 23:39:55 -04:00
Gregory R. Lee cef22e4234 MAINT: PEP8 fixes and _interpolation_test.pyx -> interpolation.pyx rename 2015-08-13 23:39:55 -04:00
Gregory R. Lee fb0b258deb DOC: update the edge mode example to include mirror 2015-08-13 23:39:54 -04:00
Gregory R. Lee 48622ca179 TST: add test for resizing 2D image with a 3D output shape 2015-08-13 23:39:54 -04:00
Gregory R. Lee 9e9c65b97c ENH: add mode 'mirror' to interpolation.pxd and dependent functions 2015-08-13 23:39:54 -04:00
Gregory R. Lee 3ae1e3138a BUG: bugfix for resize: upgrade image to 3d if necessary 2015-08-13 23:39:54 -04:00
Gregory R. Lee 080c276791 DOC: add visual example of edge modes 2015-08-13 23:39:54 -04:00
Gregory R. Lee 2f02ad385f BUG: fix bento.info 2015-08-13 23:39:53 -04:00
Gregory R. Lee c5a735420f DOC: add visual example of edge modes 2015-08-13 23:39:53 -04:00
Gregory R. Lee a36ab880fc TST: add tests for coord_map function 2015-08-13 23:39:53 -04:00
Gregory R. Lee 7cfbd70204 BUG: fix bugs in coord_map for modes wrap and reflect 2015-08-13 23:39:53 -04:00
Josh Warner cbc851bba6 FIX/STY: Remove magic and enforce PEP8 in plugins. 2015-08-13 19:47:00 -05:00
Josh Warner 4309d47239 FIX: Require networkx 1.9.1 for the 2.6 build 2015-08-13 17:39:25 -05:00
Stefan van der Walt b63fefe135 Merge pull request #1628 from JDWarner/sphinx_linkcode
Add links to GitHub source from HTML docs
2015-08-08 12:13:52 -07:00
Josh Warner (Mac) 8d33d3d072 DOC: Fix intersphinx mapping w/fallbacks 2015-08-08 12:29:05 -05:00
Josh Warner (Mac) 60e15373a4 DOC: Link to GitHub source in documentation 2015-08-02 16:41:39 -05:00
Stefan van der Walt 51fe1e2695 Merge pull request #1626 from JDWarner/fix_rank_test
Fix `test_pass_on_bitdepth` and format according to PEP8
2015-08-01 14:42:26 -07:00
Josh Warner (Mac) b35215ec6b TSTFIX: Missing assert statement and PEP8 2015-08-01 00:28:35 -05:00
Stefan van der Walt a1429f2041 Merge pull request #1622 from jjhelmus/check_build_sprint
Display user friendly error message when importing broken skimage / uncompiled from source tree
2015-07-30 15:43:54 -07:00
Jonathan Helmus 70d1afe153 DOC: Simplified the message when a broken skimage build detected 2015-07-30 14:53:49 -05:00
Jonathan Helmus 00a841f1c2 MAINT: Refactored imports 2015-07-28 14:11:51 -05:00
Jonathan Helmus f10ae88139 MAINT: remove unchecked import from util.dtype 2015-07-28 14:06:03 -05:00
Jonathan Helmus d2519d610f ENH: Build check in skimage/__init__.py module 2015-07-28 14:00:32 -05:00
Jonathan Helmus 9727711405 Removed __check_build directory 2015-07-28 13:43:48 -05:00
Jonathan Helmus b92c5653cd BLD: Updated bento.info with _check_build extension 2015-07-28 13:16:09 -05:00
Jonathan Helmus 93366d1b57 MAINT: Fixed __check_build setup.py file 2015-07-28 13:16:09 -05:00
Jonathan Helmus 64c4252eab BLD: __SKIMAGE_SETUP__ global variable for detecting build
The __SKIMAGE_SETUP__ global variable is set to True if skimage is being build
from the main setup.py file, False if not.  This behavior is modeled after a
similar setup in scikit-learn
2015-07-28 13:16:09 -05:00
michaelpacer edc16c6b75 Added build location checker, does not fully work yet. Complicated error. 2015-07-28 13:14:41 -05:00
Stefan van der Walt 3042242c8d Merge pull request #1614 from blink1073/handle-pip-upgrade
Do not try and upgrade other large dependencies on pip install
2015-07-27 14:16:01 -07:00
Juan Nunez-Iglesias c2f8c4ab12 Merge pull request #1599 from blink1073/viridis
Add the viridis colormap and use it for non-standard images
2015-07-22 12:54:07 +10:00
Steven Silvester 5632c9c1a9 Only add colorbar if the cmap is not the default 2015-07-16 21:39:05 -05:00
Steven Silvester 9fb7676c92 Fix relative import 2015-07-16 21:28:37 -05:00
Stefan van der Walt 70b4e41cd8 Merge pull request #1613 from blink1073/better-test-warnings
Add "all" warnings for skimage package to Travis tests
2015-07-16 18:30:35 -07:00
Stefan van der Walt 88862b7133 Merge pull request #1612 from blink1073/fix-manage-plugins
Be more explicit about configparser import
2015-07-16 18:17:57 -07:00
Steven Silvester eaaea690f2 Allow viridis to be used by name 2015-07-16 07:58:14 -05:00