Neil Yager
59ff9218b4
DOC: Added latex formulas to docstring
2011-11-21 09:51:20 +00:00
Neil Yager
1661015af1
ENH: Added a gallery example of GLCM textures
2011-11-21 09:51:20 +00:00
Neil Yager
cd8524b93d
ENH: Compute some standard propertices for GLCMs
2011-11-21 09:51:20 +00:00
Neil Yager
4fe7965f69
NF: Initial commit of greylevel co-occurance (pure python)
2011-11-21 09:51:20 +00:00
Stefan van der Walt
4fbdeb4b41
Merge pull request #79 from zachrahan/mcp-64bit
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BUG: Fix MCP indexing types on 64-bit systems (closes #72 ).
2011-11-17 12:21:42 -08:00
tonysyu
31db8f16ce
Merge pull request #81 from NeilYager/neil_yager-io_fix
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Merge NeilYager's import io fix
2011-11-11 08:20:28 -08:00
Neil Yager
66befec0ee
BUG: Problem importing imread
2011-11-11 12:39:55 +00:00
Zach Pincus
9307bcb5bc
fix _spath error
2011-11-08 15:19:12 -05:00
Stefan van der Walt
cc7a544122
BUG: data: Fix chessboard file name.
2011-11-07 14:48:10 -08:00
Stefan van der Walt
989fd6673e
ENH: Add verbose test function.
2011-11-07 14:45:26 -08:00
Zach Pincus
4cf55a2702
Fix another 64-bit corner case
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Fix a bug for particularly huge images that have strides > 2**31 in any
dimension.
2011-11-07 17:06:59 -05:00
Zach Pincus
ea63e7d709
use 64-bit safe types
2011-11-07 15:51:39 -05:00
Stefan van der Walt
0b124c34e2
DOC: See also to skimage.sobel instead of ndimage.sobel.
2011-11-07 11:25:28 -08:00
Stefan van der Walt
28028dc2cd
Merge pull request #78 from emmanuelle/doc_canny
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DOC: Canny filter. Improved docstring + example for the gallery.
2011-11-07 11:23:54 -08:00
emmanuelle
78d37d3af1
DOC: Canny filter. Improved docstring + example for the gallery
2011-11-06 23:52:07 +01:00
Stefan van der Walt
4c88f94508
Merge pull request #74 from stefanv/cython_hash
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ENH: Use MD5 hashes of .pyx files to determine whether they need to be recompiled.
2011-11-02 09:47:20 -07:00
Stefan van der Walt
57294c2ff9
ENH: Use hashes of .pyx files to see whether re-compilation is needed or not.
2011-11-02 09:46:13 -07:00
Stefan van der Walt
e7f0fe9ba8
Merge pull request #75 from stefanv/convex_hull
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ENH: Add binary convex hull computation.
2011-11-02 09:41:45 -07:00
Stefan van der Walt
3495767358
ENH: Rename convex_hull to convex_hull_image to allow later clean API addition of convex_hull with labels.
2011-11-02 09:38:54 -07:00
Stefan van der Walt
9aeb79fe69
Merge pull request #76 from stefanv/coins
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ENH: Add coins image.
2011-11-02 09:32:56 -07:00
Thouis (Ray) Jones
061595f99d
Fix docstring to match new default value and constraint for radius.
2011-11-02 15:09:02 +01:00
Stefan van der Walt
f19fb68d31
DOC: Update tasks with a link to a free qhull implementation.
2011-10-28 18:21:42 -07:00
Stefan van der Walt
7ea6a37634
Update test data set descriptions. Convert 'coins' to grey-level image.
2011-10-28 15:19:39 -07:00
Stefan van der Walt
33469fa69e
BUG: Allow test suite to pass with scipy < 0.9.
2011-10-28 14:56:41 -07:00
Stefan van der Walt
2191d29611
ENH: In test, do not compute hull twice.
2011-10-28 14:36:05 -07:00
Neil Yager
45ee2e1323
BUG: Fix failing test_homography unit test.
2011-10-27 19:37:09 -07:00
Stefan van der Walt
3892d5b3ae
DOC: Add url for convex hull algorithm overview.
2011-10-27 17:36:00 -07:00
Stefan van der Walt
c0fa6278f7
DOC: Update tasks list.
2011-10-27 17:19:23 -07:00
Stefan van der Walt
10a315ed8e
Merge pull request #73 from tonysyu/fix-ctmf
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BUG: Force median filter parameters to be valid.
2011-10-27 16:59:17 -07:00
Stefan van der Walt
09021dbd83
PKG: Move io to _io ( closes #39 ).
2011-10-27 16:08:21 -07:00
Tony S Yu
2c61928aa6
DOC: Add note about changed arguments for median_filter
2011-10-27 09:22:53 -04:00
Stefan van der Walt
9510e72f1c
Merge pull request #77 from NeilYager/neil_yager-homography-docstring
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DOC: Homography docstring update.
2011-10-27 02:00:15 -07:00
Neil Yager
585c1346c8
Homography docstring update
2011-10-27 09:39:03 +01:00
Stefan van der Walt
b34b9d8ddd
ENH: Only perform convex hull on select candidate pixels. Gets us a factor 30 speedup.
2011-10-26 23:17:00 -07:00
Stefan van der Walt
74f7e01e42
ENH: Improve convex_hull execution speed.
2011-10-26 19:55:46 -07:00
Stefan van der Walt
6bbeda04f3
ENH: Pre-allocate coordinate corner array.
2011-10-26 19:37:34 -07:00
Stefan van der Walt
0b32676094
DOC: Better docstring for coins.
2011-10-26 18:23:27 -07:00
Stefan van der Walt
fdac2489e9
ENH: Add coins image.
2011-10-26 17:59:43 -07:00
Stefan van der Walt
b5ad567a68
ENH: Add binary convex hull computation.
2011-10-26 17:43:30 -07:00
Tony S Yu
c6e854b7c7
Switch radius and mask arguments for median_filter
2011-10-26 16:30:07 -04:00
Tony S Yu
a63e3f4546
Require median filter radius >= 2
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The octagon structuring element used by _ctmf.pyx does not scale correctly for smaller radii.
2011-10-26 16:22:20 -04:00
Stefan van der Walt
573e208361
Merge pull request #67 from NeilYager/neil_yager-alpha
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BUG: Ignore alpha channel when opening RGBA image as grayscale.
2011-10-25 01:02:53 -07:00
Neil Yager
d56ae9631c
Bug fix: Ignore alpha channel when opening RGBA image as grayscale
2011-10-25 08:52:13 +01:00
Stefan van der Walt
0b8452fa8e
Merge Emmanuelle's port of CellProfiler's medial axis skeletonization.
2011-10-24 17:24:11 -07:00
Stefan van der Walt
f8a51a4e3e
DOC: Minor spacing fixes in docstrings.
2011-10-24 17:23:39 -07:00
emmanuelle
39a0e3577c
scikits/image -> skimage in examples
2011-10-24 23:28:21 +02:00
emmanuelle
25e986d545
Moved cython file that had not been automaticall moved by rename
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scikits/image -> skimage
2011-10-24 23:27:29 +02:00
emmanuelle
ed1f05427e
ENH address comments on PR #65 made by Stefan and Neil
2011-10-24 23:23:52 +02:00
emmanuelle
736802bad4
Medial axis transform (skeletonization) from cell profiler
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* medial_axis function in morphology.skeletonize
* plot_medial_axis.py example for the gallery
Compared to the skeletonize algorithm in morphology.skeletonize,
medial_axis is faster because it processes all pixel in one pass.
However, the resulting skeleton has more branches, that may be unwanted
depending on the application.
2011-10-24 23:22:58 +02:00
emmanuelle
0f31034a46
First integration of cell profiler medial axis transform
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(skeletonization in cell profiler)
2011-10-24 23:22:58 +02:00