Commit Graph

2619 Commits

Author SHA1 Message Date
Steven Silvester 73f5e9dccc Fixed error in peak_snr, now uses float arithmetic throughout. 2012-12-11 23:14:30 -06:00
Steven Silvester b5f9cf269f Merge pull request #1 from stefanv/adapthist_doc
Minor adapthist cleanup.
2012-12-11 20:05:48 -08:00
Stefan van der Walt 7ebbdfd75f Minor code cleanup. 2012-12-11 18:14:45 -08:00
Stefan van der Walt 530fbbb2fc DOC: Minor clean-ups of equalization demo. 2012-12-11 17:49:11 -08:00
Steven Silvester 9adae8b0c2 Fixed last remaining sig figure problem. 2012-12-11 18:57:24 -06:00
Steven Silvester 0e34c91e37 Changed all test to use 3 significant digits. 2012-12-11 18:08:27 -06:00
Steven Silvester 5444867fd0 Removed explicit io_plugin from test 2012-12-10 20:38:42 -06:00
Steven Silvester bb4f2b96df Modified test to pass with matplotlib plugin. 2012-12-10 20:37:01 -06:00
Steven Silvester ac09463cf8 Fixed comment header in test file. 2012-12-10 20:19:23 -06:00
Steven Silvester 71f505f71c Used the new function names in example and test. 2012-12-08 15:03:11 -06:00
Steven Silvester e91129de53 Renamed functions to equalize_hist/adapthist, with a deprecation warning for equalize 2012-12-08 14:53:34 -06:00
Steven Silvester 9ff0eef53d Merge branch 'adapthist' of github.com:blink1073/scikits-image into adapthist
* 'adapthist' of github.com:blink1073/scikits-image:
  Cleaned up adapthist func to use LAB for all RGB->required rest result change
  Removed sys.path hack in test, fixed spelling of import in __init__.py
  Translated clahe C code to python, added to list of contributors.
  Passed all tests with full coverage, PEP8 and Pylint performed.
  Improved support for color images using lab transform.
  Replaced generic ACM license with the Graphics Gems IV license.
  Pep8 fixes.
  Added Notes to the docstring.
  Tests pass and example works on build.
  Initial commit of adapthist modifications.

Conflicts:
	CONTRIBUTORS.txt
	doc/examples/plot_equalize.py
	skimage/exposure/_adapthist.py
	skimage/exposure/tests/test_exposure.py
	skimage/setup.py
2012-12-08 14:47:18 -06:00
Steven Silvester 08ef1e9b75 Rebased to master, incorporated view_as_blocks, cleaned up interpolate method and example 2012-12-08 14:29:36 -06:00
Steven Silvester b8844beb79 Cleaned up adapthist func to use LAB for all RGB->required rest result change 2012-12-07 17:25:07 -06:00
Steven Silvester 7f86b0c400 Removed sys.path hack in test, fixed spelling of import in __init__.py 2012-12-07 17:25:06 -06:00
Steven Silvester 94af01cdbd Translated clahe C code to python, added to list of contributors. 2012-12-07 17:25:04 -06:00
Steven Silvester 269929333b Passed all tests with full coverage, PEP8 and Pylint performed. 2012-12-07 17:23:40 -06:00
Steven Silvester c7c4db6e3c Improved support for color images using lab transform. 2012-12-07 17:22:41 -06:00
Steven Silvester 20f4cee5da Replaced generic ACM license with the Graphics Gems IV license. 2012-12-07 17:22:41 -06:00
Steven Silvester 715271bde9 Pep8 fixes. 2012-12-07 17:22:41 -06:00
Steven Silvester ea850757c8 Added Notes to the docstring. 2012-12-07 17:22:41 -06:00
Steven Silvester 9eeb990898 Tests pass and example works on build. 2012-12-07 17:22:40 -06:00
Steven Silvester c6d0acfdab Initial commit of adapthist modifications. 2012-12-07 17:22:33 -06:00
Johannes Schönberger 50c0399aa7 Merge pull request #379 from cpsaltis/fix_rotate
Fix resize argument handling in rotate.
2012-12-03 14:48:52 -08:00
Tony S Yu 55b4a1e70e Merge pull request #383 from stefanv/windowserror
BUG: WindowsError not defined under Linux.
2012-12-03 10:01:08 -08:00
Stefan van der Walt 68c2ab205e BUG: WindowsError not defined under Linux. 2012-12-03 08:49:35 -08:00
Tony S Yu 099b94efa1 Merge pull request #375 from ahojnnes/hough-peak-example
Add example for hough_peaks function
2012-12-03 06:35:47 -08:00
Christos Psaltis 298abe1ac0 Add test for resize option in rotate 2012-12-03 15:54:26 +02:00
Johannes Schönberger 49e06c9755 Add title to hough peak detection example plot 2012-12-03 14:37:26 +01:00
Johannes Schönberger 989d1de598 Merge pull request #380 from tonysyu/mark-boundaries-regression
Make black the default boundary color for mark_boundaries.
2012-12-02 23:20:01 -08:00
Tony S Yu bf28a38f6e ENH: Make black the default boundary color for mark_boundaries.
This improves visibility in light-colored image regions. Note also that the new behavior matches the behavior from the 0.7 release.
2012-12-02 16:02:27 -05:00
Steven Silvester 2e1729a9fb Cleaned up adapthist func to use LAB for all RGB->required rest result change 2012-12-01 23:46:52 -06:00
Christos Psaltis 22f94d8707 Fix resize argument handling in rotate.
It used to have exactly the opposite effect that it supposed to.
2012-12-01 12:30:40 +02:00
Stefan van der Walt a77923fe4c Merge pull request #373 from luispedro/imread_io_plugin
ENH: Add imread io plugin.
2012-11-24 11:07:52 -08:00
Luis Pedro Coelho 38f699471e TST Remove unneeded test
Per stefanv's comment on github, this was testing functionality higher
up in skimage.io
2012-11-24 19:04:55 +00:00
Luis Pedro Coelho 1f84c5e35f DOC Add myself to CONTRIBUTORS.txt 2012-11-24 19:04:43 +00:00
Luis Pedro Coelho 10ce9b89ab RFCT Use skimage.utils.convert for type conversion 2012-11-24 19:04:16 +00:00
Luis Pedro Coelho 6ebc43bad8 ENH Add imread io plugin
This relies on imread (https://github.com/luispedro/imread) which
supports a few microscopy formats otherwise hard to read (LSM and
MetaMorph STK) as well as basic ones.
2012-11-24 19:04:01 +00:00
Johannes Schönberger a7527adf31 Add example for hough_peaks function 2012-11-17 22:27:11 +01:00
Tony S Yu 13c61b9694 Merge pull request #361 from ahojnnes/hough-peaks
Add hough transform peak detection
2012-11-17 07:30:08 -08:00
Johannes Schönberger 2df0cdb443 Merge pull request #374 from tonysyu/add-rank-to-bentoinfo
Add rank extensions to bento.info
2012-11-15 00:42:53 -08:00
Tony S Yu d6a0b08859 ENH: Add filter.rank extensions to bento.info 2012-11-14 20:46:47 -05:00
Tony S Yu 2a8466a549 ENH: Compare full paths of cython extensions.
If setup.py defined an extension in a subdirectory, the extension name in bento.info didn't match the one found in setup.py. Comparing the full extension path fixes the issue.
2012-11-14 20:43:52 -05:00
Tony S Yu 22a73fc0cb BUG: Adapt to whitespace in text search 2012-11-14 20:08:16 -05:00
Johannes Schönberger 80a9a5aba5 Apply numpy reference style to rank filter descriptions 2012-11-14 08:33:27 +01:00
Johannes Schönberger 2403bee27c Merge pull request #348 from odebeir/rank_filters
Rank filters
2012-11-13 23:30:12 -08:00
Olivier Debeir 70f2b67ef7 fix: ref and test_otsu doc 2012-11-14 08:00:59 +01:00
Olivier Debeir 698d6ae13f fix:< Py_ssize_t > 0 and & pop 2012-11-13 17:07:21 +01:00
Olivier Debeir 411d4686d5 fix:wrap lines in tests 2012-11-13 17:02:08 +01:00
Olivier Debeir f133158792 autopep8 for plot_* and rank sources 2012-11-13 09:37:58 +01:00