Commit Graph

6875 Commits

Author SHA1 Message Date
Steven Silvester 9c3a6c1e91 Fix support for Sphinx 1.3 2015-03-14 10:35:04 -05:00
Steven Silvester 7d65366b67 Try a fix for py27 build 2015-03-13 22:07:04 -05:00
Steven Silvester c62397493a Handle Sphinx 1.3 API change 2015-03-13 08:18:50 -05:00
Steven Silvester 0e61374a89 Add a helper function to check for low contrast
Add a helper function to check for low contrast

Add a check for low contrast when using imsave

Use the low contrast helper in imshow and make sure warnings are always shown

Clean up parameter names and add doctests

Remove unnecessary warning context

Remove unnecessary warning context

Add dtype ranges for 64bit types

Update tests with new warnings

Fix doctest logic

Fix doctest logic

Add a low contrast test with multiple dtypes

Fix check for color images

Fix color check again

Add support for int32 types

Relax assertion for 32bit builds

Add a low contrast test with multiple dtypes

Add a low contrast test with multiple dtypes

Fix check for color images

Fix color check again

Add support for int32 types
2015-03-09 21:34:58 -05:00
Josh Warner 1712ee0722 Merge pull request #1413 from ahojnnes/inf
Use np.inf instead of float('inf')
2015-03-09 18:51:08 -05:00
Johannes Schönberger 47a4418140 Use np.inf instead of float('inf') 2015-03-08 19:37:53 -04:00
Stefan van der Walt d21b6b8974 Merge pull request #1411 from ahojnnes/rans-fix
Fix RANSAC for invalid model estimation and confidence corner case
2015-03-08 15:16:50 -07:00
Johannes Schönberger d6a737bf86 Update doctest for new estimator API 2015-03-08 13:13:46 -04:00
Johannes Schönberger eb6c3ede38 Fix RANSAC for invalid model estimation and confidence corner case
Previously, estimators did not return whether the model estimation
was successful. RANSAC now tests whether the estimation was
successful and skips invalid models.

When the confidence/stop_probability of RANSAC was set to 1,
the iteration was falsely terminated early instead of running for
the maximum number of iterations.
2015-03-06 23:47:08 -05:00
Steven Silvester f997ef64e9 Merge pull request #1406 from anntzer/plugins-relative-imports
Use relative imports to plugins.
2015-03-05 20:16:37 -06:00
Antony Lee 10af2b21ee Use relative imports to plugins.
Otherwise e.g. skivi fails to start.
2015-03-05 16:17:57 -08:00
Stefan van der Walt 1da2446a1d Set master branch to 0.12 2015-03-04 18:41:26 -08:00
Stefan van der Walt 11396fa285 Fix another formatting error in DEPENDS 2015-03-04 02:55:53 -08:00
Stefan van der Walt 4d8f468f50 Fix DEPENDS markup 2015-03-04 02:53:14 -08:00
Stefan van der Walt d3bb552527 Update version to 0.11.0 v0.11.0 2015-03-04 01:54:55 -08:00
Stefan van der Walt 435989e9c7 Merge pull request #1398 from stefanv/0.11_release_notes
Add 0.11 release notes
2015-03-04 00:37:28 -08:00
Stefan van der Walt 27d46c93b5 Add 0.11 release notes 2015-03-03 23:41:32 -08:00
Stefan van der Walt 9848cd56b6 Add missing 0.10 release notes 2015-03-02 08:50:35 -08:00
Stefan van der Walt 4cbd8fdf88 Add @msarahan to CONTRIBUTORS.txt 2015-03-02 08:33:12 -08:00
Stefan van der Walt d6870c6de7 Merge pull request #1066 from msarahan/PhaseCorrelation
Add subpixel shift registration
2015-03-02 08:30:45 -08:00
Stefan van der Walt cf8d69ca81 Merge pull request #1077 from buzmakov/master
Increase reconstruction quality of FPB in iradon documentation example.
2015-03-02 08:24:47 -08:00
Stefan van der Walt 884516980a Merge pull request #1320 from blink1073/pr/1057
Add Appveyor CI support
2015-03-02 07:55:57 -08:00
Jonathan Helmus 78a0eb6b98 Implement appveyor builds
Implement Appveyor builds

initial test

Updated appveyor.yml

New nosetest call

With conda update conda

with pillow

without pillow

TST: Change case sensitivive JPG extension

Revert "TST: Change case sensitivive JPG extension"

This reverts commit 2deed7cc63736f7c6f0387bd37df4c6643c32847.

Trying with Python 2.7

Trying with version env

Trying again with variables

Testing on all Python versions

don't allow failures

Allow failure

Do not actually use tests

Ignore failing tests

Removed Python 2.6 test

Testing only Python 2.6

Testing out more sklearn like AppVeyor CI

Added install to pip

Add artifacts

Enabled all permutations

Disable 2.6, add PIL

Python 2.6, 2.7 only with PIL

Testing with variable dependencies

Allow failure with IF ELSE

With Python 3.4

Scikit-learn like appveyor CI

Fixing paths

Undo path fix

path fix single line

path fix single line 2

Using Miniconda

More path fixes

New wheelhouse link

Added pillow to requirements.txt

Added networkx to requirements.txt

Add testing of 32/64-bit Python 2.7 and 3.4 to matrix

Debugging Cython compile

Retry with all 4 builds

Updated install.ps1 file

Updated based on latest python-appveyor-demo

Debugging pip install

Specify numpy 1.8.1 until whl is uploaded to rackspace

Use skimage-wide requirements.txt file

Minor comment change to trigger build

Install wheel and then install from WHEELHOUSE

Install six from pip

Install networkx from pip

Install pyparsing from pip

Install pytz from pip

Try using just find-links

Install the binary dependencies first, then the rest

Add pillow to the install list

Fix appveyor.yml syntax

Fix requirements.txt syntax

Fix requirements.txt syntax again

Fix appveyor call to initial install

Fix appveyor call to initial install again

Fix appveyor call to initial install yet again

Install wheel

Install wheel first

Install wheel and nose in the appveyor requirements.txt

Fix Python3 version to match python ftp site

Only use cleanup decorator if available

Add debug info to multiimage test

More debugging information

Fix handling of path separators on Windows

Add another warning guard

Fix warning handling for non-windows

Do not use TkAgg as it may be causing alloc error

Clean up echo command

Allow for unclosed file warning

Fix spacing in echo command
2015-02-28 19:57:45 -06:00
Steven Silvester 4156e20459 Merge pull request #1397 from JDWarner/fix_find_contours
FIX: Ignore exception if attempted deletion fails (fixes #817)
2015-02-28 19:29:42 -06:00
Josh Warner (Mac) ea02a4e348 FIX: Ignore exception if attempted deletion fails (fixes #817) 2015-02-28 17:11:31 -06:00
Juan Nunez-Iglesias 3f6d9fa985 Merge pull request #1385 from stefanv/README_deps_update
Update README and installation instructions
2015-02-25 13:49:42 +11:00
Josh Warner 23f1a88578 Merge pull request #1391 from ahojnnes/eigvals-fix
FIX: Hessian matrix eigvals computation
2015-02-24 12:36:03 -06:00
Steven Silvester 1649fb627d Merge pull request #1392 from jmetz/threshold_li
Update threshold_li
2015-02-24 07:58:57 -05:00
Jeremy Metz 28d0691d9e Minor modification to docstring 2015-02-24 12:39:09 +00:00
Jeremy Metz 06b2a50f22 Merge branch 'master' into threshold_li 2015-02-24 12:25:49 +00:00
Jeremy Metz 09bb2c319c Moved contribution statement to CONTRIBUTORS.txt
* Amended docstring
2015-02-24 10:23:47 +00:00
Stefan van der Walt d5468845e4 Mention license type 2015-02-24 00:28:23 -08:00
Johannes Schönberger 84bcb583d7 Fix Hessian matrix eigvals 2015-02-23 22:32:04 -05:00
Steven Silvester 6ddec9bd85 Merge pull request #1376 from jmetz/threshold_li
Li thresholding port from imagej
2015-02-23 12:55:16 -05:00
Jeremy Metz 2bc9e82465 Minor stylistic changes, removed lena test 2015-02-23 16:40:38 +00:00
Jeremy Metz 3cbae84360 PEP8 fixes, License file added, tests added
* Added 7 tests (3 in TestSimpleImage, 4 as separate functions)
* Added ImageJ license file
* Updated Li code
  * threshold set from image instead of fixed at 0.5
  * subtract min to handle -ve images (as log is integral part of alg.)
2015-02-23 11:22:12 +00:00
Stefan van der Walt c00670459f Update README and installation instructions 2015-02-22 23:28:34 -08:00
Steven Silvester a3c89ced87 Merge pull request #1384 from stefanv/py3_ghpages
Fix gh-pages under Python 3. Make robust against running twice in a row.
2015-02-22 21:48:48 -05:00
Stefan van der Walt 6ab7df1875 Fix gh-pages under Python 3. Make robust against running twice in a row. 2015-02-22 17:23:13 -08:00
Michael Sarahan 71a89697f0 improve test coverage. Use SciPy's fourier_shift for examples. 2015-02-21 11:33:37 -08:00
Michael Sarahan cf09b0c5ef Incorporate fixes for complex images 2015-02-20 20:55:46 -08:00
Steven Silvester b27eb88496 Merge pull request #1382 from arve0/ImageViewer.update_image
move CollectionViewer `update_image` to parent class
2015-02-20 08:18:25 -06:00
arve0 3acae2274f move CollectionViewer update_image to parent class 2015-02-20 13:09:25 +01:00
Josh Warner 4644bdd347 Merge pull request #874 from emmanuelle/nlm_denoise
FEAT: NL-means denoising
2015-02-19 16:53:58 -06:00
Josh Warner 5247c36af7 Merge pull request #1380 from arve0/fix_Blitmanager.remove_artists
FIX: Remove artist from artists, not itself
2015-02-18 16:41:53 -06:00
Josh Warner 3f33ce7797 Merge pull request #1378 from arve0/fix_canny_simple_viewer_example
FIX: Use feature.canny in viewer example
2015-02-18 16:33:38 -06:00
arve0 2308ba0617 fix typo artist.remove -> artists.remove 2015-02-18 22:19:31 +01:00
arve0 de4df6559a use feature.canny 2015-02-18 21:32:16 +01:00
Stefan van der Walt c0a5010998 Merge pull request #1377 from blink1073/test-against-pil
Test against PIL on Python 2.7 Travis
2015-02-17 10:47:43 -08:00
Steven Silvester 2613b81bf7 Fix name of pil package 2015-02-17 11:12:24 -06:00