Commit Graph

115 Commits

Author SHA1 Message Date
Steven Silvester a4e4e57ba5 Create new expected_warnings helper and some cleanup
Add new helper function for expected warnings during test

Indentation cleanups and avoid skipping doctests if possible.
2014-12-23 16:50:18 -06:00
Steven Silvester 4680f30466 Add a test setup helper function
Add a function to set up a skimage test

Switch to new test helper function

Import local packages that raise warnings in test setup function

More fixes to doctests

Fix regionprops doc test

Try and fix the test_rank failure.

Remove no longer needed RectangleSelector shim

Skip more doctests in _regionprops

Try importing another scipy subpackage
2014-12-23 16:49:20 -06:00
Steven Silvester f72882fbd2 Import scipy before turning on warnings 2014-12-23 16:49:19 -06:00
Steven Silvester 0debedd82c Handle more warnings and reset io plugins as needed
Reset plugins prior to running collections test

Handle warnings in morphology pkg

Add __init__ for morpohology tests

Handle warnings for novice pkg

Handle warnings for restoration pkg

Handle warnings for segmentation pkg

Handle warnings for _shared pkg

Handle warnings for transform pkg

Handle warnings for util pkg

Handle warnings in viewer module
2014-12-23 16:48:16 -06:00
Pratap Vardhan db7b43199d BUG: Change dtype 2014-12-15 18:13:39 +05:30
Pratap Vardhan 8d50561d18 TST: Test for ellipse structuring element 2014-12-15 13:21:15 +05:30
Pratap Vardhan 073f28e90e TST: Test for selem.cube 2014-12-14 10:52:53 +05:30
Pratap Vardhan 9d6516903d DOC: Add test functions docstrings 2014-12-14 01:28:09 +05:30
Pratap Vardhan 2058fe23cb CLN: Minor cleanup - unused imports, pep8 2014-12-14 01:17:27 +05:30
Stefan van der Walt 36aa4cdb6f Merge pull request #1254 from matejak/label3d
Refactor labeling and extend to 3D
2014-12-04 12:31:29 +02:00
Matěj Týč e41bff898a Added fix for the strange input array shapes + tests 2014-11-28 16:45:52 +01:00
Matěj Týč abf3dbc593 Added and tested proper exception handling concerning array shape 2014-11-16 15:33:13 +01:00
Matěj Týč 7c7ecc4bdc Mainly typo fixes 2014-11-11 21:49:57 +01:00
Matěj Týč 438a9355d6 Fixed bugs so test pass now 2014-11-11 00:39:49 +01:00
Matěj Týč 53f93a7f8e Added tests for 3D labelling (that fail) 2014-11-08 12:09:19 +01:00
Rebecca 1b217f971e replacing lena in examples and most tests 2014-11-07 16:01:23 +02:00
Steven Silvester 2374b6a1ff Merge pull request #1219 from jni/reconstruct-error
Raise meaningful error when wrong "method" passed to `reconstruct`
2014-11-05 20:42:35 -06:00
Steven Silvester 66aaf71943 Merge pull request #1217 from jni/morpho-out
Allow discontiguous out arrays in `skimage.morphology.grey`
2014-11-05 20:35:56 -06:00
Juan Nunez-Iglesias 39d042e4ba Test correct error for wrong method in reconstruct 2014-11-06 10:29:43 +11:00
Juan Nunez-Iglesias 1a3ec0299c Add tests for discontiguous out arrays in grey morpho 2014-11-04 15:20:21 +11:00
Juan Nunez-Iglesias 8711c74533 Test type warning from remove_small_objects 2014-09-30 15:04:28 +10:00
Stefan van der Walt 5ba4b7ccd3 Expose point_in_poly and move to measure module 2014-09-22 17:56:18 +02:00
Juan Nunez-Iglesias 85a5cea533 Merge pull request #1054 from blink1073/add_test_seeds
Add random seeds to tests per #1044

Additionally, change all `np.random.random` to `np.random.rand` calls, as the former are not affected by `np.random.seed`.
2014-07-20 07:48:49 -05:00
blink1073 5677dafe41 Move away from random.random in favor of random.rand 2014-07-19 18:18:23 -05:00
Nelson Brown 6e8ae37f07 Change ndimage test image to fit uint8 range 2014-07-16 20:03:37 -07:00
Nelson Brown eb4725826d Change test of ndimage equivalence to use uint8 test image 2014-07-16 19:57:25 -07:00
Nelson Brown 4449c77884 Fix calls to ndimage to use footprint argument 2014-07-15 08:39:34 -07:00
Nelson Brown 7976520e7a Add test that the 2D results correspond to scipy's
Remove trailing whitespace
2014-07-15 08:25:17 -07:00
Nelson Brown a1519a015e Change binary morphology functions to output numpy.bool dtype 2014-07-13 19:59:43 -07:00
Nelson Brown d9909c4db9 Add tests for ndimage fallback for 3D white_tophat & black_tophat 2014-07-13 12:36:05 -07:00
Nelson Brown ea3e65f25a Add 3d-fallback tests for binary functions 2014-07-12 16:54:35 -07:00
Nelson Brown 2b91c259d6 Add fallback decorator for 3D images
We don't support images greater than 2D, so fall back on ndimage
2014-07-12 15:22:48 -07:00
Nelson Brown 1ef556b710 Remove unnecessary whitespace 2014-07-11 14:51:57 -07:00
Nelson Brown bb732c9225 Add default structuring element to morphology 2014-07-11 13:50:55 -07:00
blink1073 5ef3f95d71 Add random seeds to tests per #1044 2014-07-05 12:49:42 -05:00
Johannes L. Schönberger 6546b9dba4 Merge pull request #1007 from stefanv/label_refactor
Move `morphology.label` to `measure.label` and prepare for 0-label transition
2014-05-25 21:56:42 -04:00
Stefan van der Walt c0be2ec505 Correctly apply catch_warnings() 2014-05-26 01:21:58 +02:00
Johannes Schönberger 7b86728498 Add full test coverage for corner_subpix and fix bug 2014-05-10 10:12:41 -04:00
Johannes Schönberger e4a60e4bf2 Test invalid input for selem 2014-05-10 09:44:59 -04:00
Johannes Schönberger 69a0255a28 Test invalid input for seed 2014-05-10 09:07:01 -04:00
Stefan van der Walt 1de102a885 Fix broken and circular imports 2014-05-09 02:53:57 +02:00
Stefan van der Walt 5ba3ea421c Fix imports and suppress deprecation warnings 2014-05-08 19:14:38 +02:00
Stefan van der Walt 7152d5c314 Move label to measure module (with deprecation). Warn that background parameter will default to 0 in v0.12. 2014-05-08 17:49:47 +02:00
Josh Warner (Mac) b8334e85c8 failUnless -> assertTrue 2014-05-07 23:16:42 -05:00
Jeremy Metz ef779d1588 Fixed PEP8 spaces 2014-02-02 12:40:37 +00:00
Jeremy Metz 0136fd5915 Removed trailing whitespaces 2014-02-01 20:30:39 +00:00
Jeremy Metz 920c3efb83 Added new convex_hull_image qhull test 2014-02-01 16:17:53 +00:00
Johannes Schönberger a2cde5ebb0 Test invalid inplace operation 2013-11-22 00:17:59 +01:00
Johannes Schönberger 5e2b04c486 Remove deprecated is_local_maximum function 2013-10-14 19:52:32 +02:00
Stefan van der Walt 4f74a007d9 Test that output argument is correct. 2013-10-12 19:57:35 +02:00