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4998 Commits

Author SHA1 Message Date
Evgeni Burovski c9ed06ad92 MAINT: skel3d: statically type Euler LUT 2016-02-20 17:26:11 +00:00
Evgeni Burovski 32865d2bd9 MAINT: skel3d: statically type index_octants 2016-02-20 17:26:11 +00:00
Evgeni Burovski 53f48cb6c0 MAINT: skel3d: only allocate and type neighborhood once; switch off 
bounds checking
 2016-02-20 17:26:11 +00:00
Evgeni Burovski f1176a5319 MAINT: skel3d: add static typing to obvious places 2016-02-20 17:26:11 +00:00
Evgeni Burovski 06d5a91f57 MAINT: skel3d: move computations to cython 2016-02-20 17:26:11 +00:00
Evgeni Burovski a85c9ddd3c MAINT: move new skeletonize3d files to more appropriate places 2016-02-20 17:26:11 +00:00
Evgeni Burovski e421cea331 ENH: start adding a python version of Skeletonize3D code 2016-02-20 17:26:11 +00:00
Emmanuelle Gouillart 6614e1339a Merge pull request #1924 from ev-br/tempita 
Handle tempita templed cython files
 2016-02-16 23:25:53 +01:00
Evgeni Burovski ad535ac2bd MAINT: address review comments 2016-02-16 07:10:13 +00:00
Juan Nunez-Iglesias dd5a5e5556 Merge pull request #1944 from sciunto/temp_file 
MAINT: fixes #1652
 2016-02-16 17:59:55 +11:00
François Boulogne 461b06a517 MAINT: fixes #1652 
add close()

Stephans solution

close file before

remove comment
 2016-02-15 22:01:55 -05:00
emmanuelle 45ff200c31 3D test for register_translation, as required by TODO.txt 2016-02-12 22:40:32 +01:00
Johannes Schönberger 116ef0d649 Remove unit tests for deprecated features 2016-02-09 12:25:55 +01:00
Johannes Schönberger 9d9a4b3e0b Fix some remaining TODO items 2016-02-09 11:11:28 +01:00
Egor Panfilov 66102ad91a Merge pull request #1895 from OrkoHunter/denoise_bilateral 
Raise warning for 3D images in denoise_bilateral
 2016-02-05 17:22:04 +03:00
Himanshu Mishra 7014d04327 Remove useless multichannel=True kwarg from tests 2016-02-05 14:38:13 +05:30
Himanshu Mishra b40d028550 Add tests for warnings in denoise_bilateral 2016-02-05 08:05:58 +05:30
Evgeni Burovski f4cbcf29f3 BLD: use default encoding 2016-02-04 08:38:52 +00:00
François Boulogne 02d8c6c1b5 MAINT: fix test name 2016-02-03 21:06:22 -05:00
Stefan van der Walt a39dac7c52 Use row/column instead of x, y convention 2016-02-02 12:05:30 -08:00
Evgeni Burovski 3cd4d03cb2 ENH: handle tempita templated Cython source files, *.pyx.in 2016-02-02 16:35:20 +00:00
Stefan van der Walt 41569beacb With matplotlib dependency raised to 1.3, remove inlined clipping code 2016-02-02 08:28:19 -08:00
Stefan van der Walt be667e0947 Work around end-point duplication bug in Matplotlib 2016-02-02 08:25:41 -08:00
Stefan van der Walt bf7e885064 Polygon clipping requires mpl, but it is now a dependency. Remove warning. 2016-02-02 08:25:41 -08:00
Stefan van der Walt 32182574ec Update coordinate convention, inline matplotlib clip_to_bbox 
The `clip_to_bbox` function is only available in later versions of Matplotlib,
so for now inline it so that we remain compatible with v1.1.
 2016-02-02 08:25:41 -08:00
Stefan van der Walt 96e9e77388 PEP8 cleanups 2016-02-02 08:25:41 -08:00
Stefan van der Walt 5e906fb4ec Add missing import 2016-02-02 08:25:41 -08:00
Stefan van der Walt 5280cacb82 Avoid matplotlib testing problems on Travis-CI 2016-02-02 08:25:41 -08:00
Stefan van der Walt 45f8bd2e72 Fix typos from PR feedback 2016-02-02 08:25:41 -08:00
Stefan van der Walt ad70668bc6 Document output of polygon_area 2016-02-02 08:25:41 -08:00
Stefan van der Walt 4907da0409 Update notes on algorithm. Switched from Liang-Barsky to Sutherland-Hodgman. 2016-02-02 08:25:41 -08:00
Stefan van der Walt 88a269c282 Add polygon perimiter drawing 2016-02-02 08:25:41 -08:00
Johannes Schönberger e6338b75bd Merge pull request #1921 from JDWarner/image_comparison_prefix 
STY: Image comparison functions now share common prefix
 2016-02-02 17:07:17 +01:00
Joshua Warner ab7f0774aa FIX: Pass arguments from deprecated function, update examples. 2016-02-01 13:57:56 -07:00
Johannes Schönberger 6eea36a3be Fix test cases for new deprecation behavior 2016-02-01 08:47:36 +01:00
Johannes Schönberger 8c5d30c2ac Fix unknown Properties section warning 2016-02-01 08:47:36 +01:00
Johannes Schönberger 3bf2250b64 Fix unknown Note section warning 2016-02-01 08:47:36 +01:00
Johannes Schönberger 5e780bb27f Fix unknown Example section warning 2016-02-01 08:47:36 +01:00
Johannes Schönberger 7cf9d7ffdb Fix deprecation warning in equalize_adapthist 2016-02-01 08:47:36 +01:00
Joshua Warner b218cfdd81 STY: Image comparison functions now share common prefix 2016-01-31 23:11:38 -07:00
Juan Nunez-Iglesias 9405daa12e Merge pull request #1827 from stefanv/daisy_aa_draw 
Daisy aa draw
 2016-02-01 15:41:24 +11:00
Johannes Schönberger 4e5c4d3c4d Fix rgb2grey for alpha channel 2016-01-31 21:50:56 +01:00
Johannes Schönberger f4e0370bc2 Make sure rgb2gray output is contiguous 2016-01-31 19:35:53 +01:00
Johannes Schönberger 65a29071fe Speedup rgb2gray and return congiguous array 2016-01-31 19:21:03 +01:00
Stefan van der Walt 6d103b5a7f Revert back usage of full_like to support older numpy 2016-01-31 09:43:28 -08:00
Josh Warner d91aff47df Merge pull request #1817 from blink1073/upgrade-imshow 
ENH: Allow axes to be provided to imshow and fix colorbar
 2016-01-31 10:03:16 -06:00
Steven Silvester 0aafbaf78b Add another note about the new warning 2016-01-31 08:37:49 -06:00
Steven Silvester bbb35134a7 Add a note about the new warning 2016-01-31 08:36:38 -06:00
Steven Silvester da038c4d88 Debugging appveyor warning 2016-01-31 07:48:47 -06:00
Johannes Schönberger a3313abd20 Merge pull request #1916 from blink1073/warn-stacklevel 
Use a stacklevel of 2 by default for all warnings
 2016-01-31 11:25:39 +01:00