Commit Graph
610 Commits
Author SHA1 Message Date
dan 68f627aca7 pep8. Documenatation correction. 2015-06-12 07:49:00 +02:00
dan 360d384633 used gray2rgb function. Code is more readable now. 2015-06-11 08:38:18 +02:00
dan 0e96098e49 small documentation correction 2015-06-11 08:01:26 +02:00
dan cc81bdb26b moved multiblocl_local_binary_pattern in python file in order for sphinx to be able to correctly creat documentation. 2015-06-11 07:52:06 +02:00
dan d20eae7cd1 small correction in documentation. 2015-06-10 11:43:05 +02:00
dan 61442e040e Switched to using integrate Cython function from skimage._shared. All changes were made to make it fit. 2015-06-10 11:38:20 +02:00
dan c4f8e0126b MBLBP is cdef function now. Corrected the example repeated imports. 2015-06-09 17:04:11 +02:00
dan fb6ef72a31 public MBLBP function created for users to safely use it. 2015-06-09 14:56:29 +02:00
dan d39434c30e MBLBP optimized by taking out constants definition out of function. Visualization function of MBLBP now supports colors and opacity. Examples are updated. 2015-06-09 14:18:58 +02:00
dan 83c3bd10c8 Cython implementation of MB-LBP. Updated MB-LBP visualization without matplotlib.Examples to gallery were added. Tests are made more easily readable. 2015-06-08 09:16:22 +02:00
dan 086d8c667b imports now inside of the file 2015-05-29 23:03:12 +02:00
dan 3c82d9505f plain python multiblock lbp implemented with test coverage 2015-05-29 22:58:39 +02:00
Johannes Schönberger 990892fcde Replace libc.math.NAN with numpy.math.NAN for MSVC 2015-05-21 08:27:00 -07:00
Johannes Schönberger a2ddba21a5 Do not acquire GIL for hessian_matrix_det 2015-05-20 20:22:02 -07:00
Johannes Schönberger 4a95345489 Do not acquire GIL for texture functions 2015-05-20 17:51:41 -07:00
Johannes Schönberger 9cd7ca5881 Do not acquire GIL for BRIEF 2015-05-20 17:39:46 -07:00
Johannes Schönberger bca458bc1c Do not acquire GIL for CENSURE 2015-05-20 09:04:58 -07:00
Johannes Schönberger a489b85b22 Do not acquire GIL for corner detectors 2015-05-20 07:45:04 -07:00
Johannes Schönberger c52c7f4bfb Do not acquire GIL for ORB 2015-05-20 07:38:47 -07:00
Daniel Wennberg d5099db362 Fix PEP8 2015-05-03 01:32:56 +02:00
Daniel Wennberg b80e494484 Change data types to conform to style guide 2015-05-02 18:12:30 +02:00
Daniel Wennberg dc0a91b569 Fix doctests for #1257
Changing the return type of the blob functions from integer to float
arrays invalidated the docstring examples. Updating the examples fixes
the doctests.
2015-05-02 18:12:30 +02:00
Daniel Wennberg c86c6effe8 Fix tests for #1257
The test of blob_doh() set an unrealistically strict threshold for the
accuracy of the estimated blob radius, causing the test to fail with the
true floating-point value (previously, the test passed only because
sigma was truncated to integer). Increasing the threshold fixes the
problem.
2015-05-02 18:12:30 +02:00
EricandDaniel Wennberg 833edc17ef Fixed typo 2015-05-02 18:12:30 +02:00
EricandDaniel Wennberg eb6ddc735b Changed local_maxima to float32 2015-05-02 18:12:30 +02:00
EricandDaniel Wennberg 43246e30af Blob detection supports for non-integer sigmas 2015-05-02 18:12:30 +02:00
Stefan van der Walt d6870c6de7 Merge pull request #1066 from msarahan/PhaseCorrelation
Add subpixel shift registration
2015-03-02 08:30:45 -08:00
Johannes Schönberger 84bcb583d7 Fix Hessian matrix eigvals 2015-02-23 22:32:04 -05:00
Michael Sarahan 71a89697f0 improve test coverage. Use SciPy's fourier_shift for examples. 2015-02-21 11:33:37 -08:00
Michael Sarahan cf09b0c5ef Incorporate fixes for complex images 2015-02-20 20:55:46 -08:00
Steven Silvester ed7aecdc4c Fix links 2015-02-07 19:33:30 -06:00
Steven Silvester be7154f23d Skip build on 3.2
Skip doc build on 3.2

Skip doc build on 3.2

Use block literal

Fix html make target

Revert change to threshold_isodata

Fix skimage.novice and thresholding warnings

Fix feature.__init__ __all__

Fix generic.py link

Doc reference fixes

Fix missing class member warnings

Add parallelization to the user guide toc

Remove unused automodule directives

Fix sub_dirs in gallery_index

Remove unused file and fix reference to api/api

Add missing links to user guide

Use pre-output links to images

Recover from Juan's doc 'upgrades'
2015-02-07 16:40:37 -06:00
Michael Sarahan 03dc489457 Add subpixel-precision image translation registration function to feature module 2015-01-29 20:09:50 -08:00
Steven Silvester b6a1bcdb06 Merge pull request #1324 from ahojnnes/rel-import
Use relative imports in skimage files
2015-01-25 15:26:34 -06:00
kpk09 305f5fd225 Using numpy.argwhere makes code easier to read 2015-01-25 00:22:11 +00:00
kpk09 c5ac705123 Fixed bug in feature.peak_local_max: num_peaks should now be usable for ND arrays. 2015-01-25 00:19:12 +00:00
kpk09 22ffc20fc4 Added broken test for feature.peak_local_max when the image is 3D and num_peaks is set. The current code only holds for 2D images. 2015-01-25 00:15:20 +00:00
Johannes Schönberger ee5c6fbeb2 Use relative imports in skimage files 2015-01-22 07:36:48 -05:00
Steven Silvester f898bd0209 Style fixes 2014-12-26 11:26:30 -06:00
Steven Silvester c0a0490eed Fix handling of multiple warnings and update tests
Fix handling of multiple warnings

Update all test __init__ files

Update segmentation pkg

Update the color pkg

Update the exposure pkg

Update the filters pkg

Update the io pkg

Update the measure pkg

Update morphology package

Restructure test setup function

Add expected_warnings to __all__

Update restoration pkg.

Remove explicit filter check since it is done elsewhere

Fix the image test helpers

Update the transform pkg

Fix util pkg

Update viewer pkg
2014-12-23 16:51:06 -06:00
Steven Silvester 4680f30466 Add a test setup helper function
Add a function to set up a skimage test

Switch to new test helper function

Import local packages that raise warnings in test setup function

More fixes to doctests

Fix regionprops doc test

Try and fix the test_rank failure.

Remove no longer needed RectangleSelector shim

Skip more doctests in _regionprops

Try importing another scipy subpackage
2014-12-23 16:49:20 -06:00
Steven Silvester f72882fbd2 Import scipy before turning on warnings 2014-12-23 16:49:19 -06:00
Steven Silvester 9e8f91930e Handle warnings in several packages
Start handling warnings in data, exposure, and draw

Add a known_warning decorator and suppress warnings in color pkg

Use the existing all_warnings context manager

Raise warnings in data

Raise warnings in draw

Raise warnings in exposure

Suppress warnings in exposure tests

Add comments about warning suppressions

Raise warnings in feature

Fix warnings in filter package

Add warning handling to graph

Handle warnings in io package
2014-12-23 16:47:41 -06:00
Johannes Schönberger 20d81529f4 Fix matching test cases 2014-12-23 12:40:15 +01:00
Johannes Schönberger a1a2f9c988 Remove __init__.py from tests folder, remove unnecessary load of test image 2014-12-22 20:39:18 +01:00
Pratap Vardhan b72a960670 DOC: Misc spell corrections 2014-12-16 11:41:24 +05:30
Johannes Schönberger 3a1079a180 Misc PEP8 fixes 2014-12-14 02:56:14 +01:00
emmanuelle 873a2bab4f Modified a few docstrings that made doctesting fail 2014-12-07 16:58:36 +01:00
Vighnesh Birodkar 9a8c7e5325 fixed blob area overlap function warning 2014-11-26 23:10:49 +05:30
Stefan van der Walt 78a7b7307a Rename and deprecate filter module to prevent shadowing of built-in keyword 2014-11-10 12:53:50 +02:00