Juan Nunez-Iglesias
d8cc148d8c
Replace individual errors by 2D decorator
2015-12-24 19:00:43 +01:00
emmanuelle
0359284623
Modified some methods in _RegionProperties class to make them
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dimension-agnostic. Removed the NotImplementedError for 3-D images in
regionprops function.
2015-12-24 18:56:49 +01:00
emmanuelle
e1751f91e2
Some PEP8 in test module
2015-12-24 18:52:57 +01:00
Steven Silvester
f3392bc4f5
Merge pull request #1848 from soupault/doc_edge_modes
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DOC: plot_edge_modes improvement
2015-12-24 10:28:59 -06:00
Egor Panfilov
18a2747239
DOC: plot_edge_modes improvement, closes #1816
2015-12-24 18:17:28 +03:00
Emmanuelle Gouillart
98d2446594
Merge pull request #1806 from JDWarner/sphinx_formatting
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STY: Fix formatting and use tight_layout in doc examples.
2015-12-24 10:47:31 +01:00
Emmanuelle Gouillart
d4b3aeeed3
Merge pull request #1846 from arokem/hull-docs
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DOC: Small one. The input to this one needs to be 2D.
2015-12-24 10:34:00 +01:00
Emmanuelle Gouillart
6740ef9849
Merge pull request #1842 from jni/1840
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Specify 2D images in denoise bilateral docstring
2015-12-24 09:59:11 +01:00
Josh Warner (Mac)
9b9473c6a1
STY: Fix formatting and use tight_layout in doc examples.
2015-12-23 20:53:51 -05:00
arokem
9fb5f1333d
TST: Test both functions(!).
2015-12-23 15:36:35 -08:00
Stefan van der Walt
cc8c3b7687
Merge pull request #1847 from emmanuelle/remove_label_from_morphology
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Remove deprecated label function from morphology module in preparation for 0.12 release
2015-12-23 15:01:46 -08:00
arokem
436d0e8ca3
TST: Test error handling in convex_hull, convex_hull_object.
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Also, a few PEP8 fixes in both module and tests.
2015-12-23 14:57:44 -08:00
arokem
227211fec7
DOC: Small one. The input to this one needs to be 2D.
2015-12-23 14:24:52 -08:00
emmanuelle
0b61b8f46f
Removed deprecated label function from morphology module in preparation
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for 0.12 release.
2015-12-23 23:24:22 +01:00
Emmanuelle Gouillart
4a07a3c9ad
Merge pull request #1810 from alexandrejaguar/master
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Solving white space + improving code +PEP8
2015-12-23 23:14:32 +01:00
Emmanuelle Gouillart
4509338aac
Merge pull request #1777 from stevendbrown/rp_intensity_check
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Added label vs. intensity shape checking to regionprops
2015-12-23 22:34:59 +01:00
Johannes Schönberger
c5f9fffaad
Merge pull request #1844 from emmanuelle/fix_euler
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Fix euler
2015-12-23 21:56:46 +01:00
Alexandre Fioravante de Siqueira
af95784ac9
Solving white space + improving code +PEP8
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Solving white space + Correcting code
Solving white spaces
Solving white spaces
Solving white spaces
Answering comments
Correcting silly mistakes
Solving white spaces
Trying again... now with Travis enabled
2015-12-23 18:20:57 -02:00
Emmanuelle Gouillart
fb9fdec7db
Merge pull request #1845 from grlee77/tv_weight_fix
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Use appropriate weights in tv_denoise_chambolle
2015-12-23 19:53:51 +01:00
Gregory R. Lee
3f5aa73eb4
Update tests to also use reasonable weights for TV denoising
2015-12-23 12:30:12 -05:00
Gregory R. Lee
f143f4b39e
Change default weight for denoise_tv_chambolle to a value that is reasonable for float images scaled to the [0, 1] range
2015-12-23 12:29:37 -05:00
emmanuelle
d62524f103
Mentioned Euler characteristic (instead of Euler number) in docstring of
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regionprops.
2015-12-23 16:26:23 +01:00
emmanuelle
a56c6071c2
Corrected bug in the computation of the Euler characteristic.
2015-12-23 16:09:13 +01:00
Emmanuelle Gouillart
d6105a0fe4
Merge pull request #1782 from pratapvardhan/clncython
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BUG: Buffer dtype mismatch, expected 'Py_ssize_t' but got 'long'
2015-12-23 15:35:05 +01:00
Juan Nunez-Iglesias
e102011098
Specify 2D images in denoise bilateral docstring
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Addresses #1840
2015-12-23 23:57:22 +11:00
Juan Nunez-Iglesias
f46a7e05ae
Merge pull request #1841 from blink1073/fix-matplotlib-2.6
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Lower required matplotlib version on 2.6 Travis test
2015-12-23 23:54:06 +11:00
Steven Silvester
39e1bb9376
Lower required matplotlib version on 2.6 test
2015-12-23 05:54:21 -06:00
Emmanuelle Gouillart
ea9ed9ccd9
Merge pull request #1826 from jni/rag-generic
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Allow construction of simple RAGs from label images
2015-12-22 17:37:02 +01:00
Steven Silvester
a4d0ac85cc
Merge pull request #1603 from michaelpacer/draw_coords
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Fixed variable names to accord with r, c naming convention
2015-12-21 12:11:16 -06:00
Steven Silvester
d003f701a6
Merge pull request #1834 from emmanuelle/active_contour_example
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Move active contour example to edges section of the gallery
2015-12-20 07:59:19 -06:00
emmanuelle
8758e2f9bb
Moved active contours example in edges section
2015-12-20 10:09:59 +01:00
emmanuelle
b68decad9e
Thickened contours so that they are more visible in gallery thumbnail.
2015-12-20 10:08:31 +01:00
Emmanuelle Gouillart
f0eec46e5c
Merge pull request #1783 from ivoflipse/fix_hog
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Fixing Cythonized version of HOG
2015-12-19 17:37:24 +01:00
Steven Silvester
9e3b87c092
Merge pull request #1823 from emmanuelle/structure-gallery
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Added sections to gallery of examples
2015-12-19 10:13:17 -06:00
emmanuelle
55f5103dd8
Added sections to gallery of examples
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Modified travis_script.sh to account for the new structure of the gallery
Added README.txt files in directories of gallery examples
Fixed references to gallery images in user guide pages
Fixed broken links
2015-12-19 15:28:15 +01:00
Juan Nunez-Iglesias
14095de291
Merge pull request #1830 from scottsievert/fftconvolve
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Clean up richardson-lucy deconvolution function
2015-12-16 14:42:24 +11:00
Josh Warner
8f0c5ab4d6
Merge pull request #1790 from WarrenWeckesser/imread-indexed-png-alpha
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FIX: imread w/PIL plugin no longer drops indexed PNG alpha channel
2015-12-15 19:57:23 -07:00
scottsievert
fb99e3cce6
styles code (no more functions, less lines)
2015-12-15 19:19:14 -06:00
Juan Nunez-Iglesias
06186710d5
Update outdated docstring of _add_edge_filter
2015-12-16 08:31:30 +11:00
Warren Weckesser
3251d3c07a
BLD: Increase the minimum pillow version to 2.1.0.
2015-12-15 12:30:43 -05:00
Warren Weckesser
6b908c1bb1
BUG: io: imread in the PIL plugin drops indexed PNG alpha channel.
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When using the PIL plugin to read an indexed PNG file that has
an alpha channel, the alpha channel would be lost.
2015-12-15 12:30:43 -05:00
Juan Nunez-Iglesias
2f3bc7f08d
Merge pull request #1828 from stefanv/radon_circle_warn
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radon transform: ignore values outside circle
2015-12-15 12:57:55 +11:00
Stefan van der Walt
74a015d1d4
radon transform: when circle=True, ignore values outside circle without throwing an error ( closes #1808 )
2015-12-14 17:13:29 -08:00
Juan Nunez-Iglesias
5c03f2aff5
Bug: not all edges found by asymmetric footprint
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If we have a label image:
[[1, 2],
[3, 4]]
Then the footprint:
[[0, 0, 0],
[0, 1, 1],
[0, 1, 1]]
will not discover the edge (2, 3), even though that edge should be
present when `connectivity=2`.
This commit fixes the bug by using a complete footprint, without the
top/left surfaces zeroed out.
See also:
https://github.com/scikit-image/scikit-image/pull/1826#issuecomment-164597442
2015-12-15 10:56:04 +11:00
Johannes Schönberger
86052d67bd
Merge pull request #1815 from stefanv/regionprops_cached_decorator
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Regionprops cached decorator
2015-12-14 15:12:39 -05:00
Stefan van der Walt
4aa08fe353
Simplify cache
2015-12-14 00:42:29 -08:00
Stefan van der Walt
bf5ba4540b
Fix doc setting for Python 2.x
2015-12-14 00:42:29 -08:00
Stefan van der Walt
024dd34b19
Clean up style and PEP8
2015-12-14 00:42:29 -08:00
Stefan van der Walt
5e848f5889
Auto-generate _RegionProps property docstrings
2015-12-14 00:42:29 -08:00
Juan Nunez-Iglesias
4deeb1f802
Move max_id logic to top of RAG constructor
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max_id is used during RAG building iteration, resulting in an error if
it is not defined ahead of the generic_filter stage.
2015-12-14 19:06:43 +11:00