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6,847 Commits 8 Branches 45 Tags
ea02a4e348d2c4841c2dd681e8401aa48ccc65ba
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340 Commits
Author SHA1 Message Date
Josh Warner (Mac) ea02a4e348 FIX: Ignore exception if attempted deletion fails (fixes #817) 2015-02-28 17:11:31 -06:00
Steven Silvester 09876408fc Fix some sphinx warnings and add to build 
Fix some sphinx warnings

Add documentation build to test

Add documentation build to test

Remove change in numpydoc

Remove change in apigen

Add makefile target for html and add to travis script

Add a makefile target for html and add to travis script

Fix more sphinx warnings
 2015-02-07 16:40:26 -06:00
Stefan van der Walt 13f9b89023 Merge pull request #1319 from ahojnnes/geom-est 
Improve conditioning of geometric transformations
 2015-01-28 13:31:25 -08:00
Steven Silvester b6a1bcdb06 Merge pull request #1324 from ahojnnes/rel-import 
Use relative imports in skimage files
 2015-01-25 15:26:34 -06:00
Johannes Schönberger d3c4c704fe Speedup regionprops 2015-01-22 07:53:10 -05:00
Johannes Schönberger ee5c6fbeb2 Use relative imports in skimage files 2015-01-22 07:36:48 -05:00
Johannes Schönberger ad85dfabd5 Disable catch of all warnings, return nan params instead 2015-01-22 06:49:16 -05:00
Johannes Schönberger acf68c6d7c Add new parameter to catch exceptions during RANSAC 2015-01-21 14:10:09 -05:00
Steven Silvester b7f4f61ae7 Remove unnecessary measure.label shim 
Conflicts:
	skimage/measure/_label.py
 2014-12-26 21:34:33 -06:00
Steven Silvester f898bd0209 Style fixes 2014-12-26 11:26:30 -06:00
Steven Silvester cb2745cfdf Change default neighbors to None 2014-12-24 05:57:37 -06:00
Steven Silvester 3829401e9f Fix label wrapper function 2014-12-23 21:20:23 -06:00
Steven Silvester 2d3ada19e5 Allow for no exceptions to be raised and cleanup 
Allow for no exceptions to be raised

Add some helpful comments

Remove doctest skips

Remove TODO note

Cleanup and skip failing doctest
 2014-12-23 16:51:18 -06:00
Steven Silvester c0a0490eed Fix handling of multiple warnings and update tests 
Fix handling of multiple warnings

Update all test __init__ files

Update segmentation pkg

Update the color pkg

Update the exposure pkg

Update the filters pkg

Update the io pkg

Update the measure pkg

Update morphology package

Restructure test setup function

Add expected_warnings to __all__

Update restoration pkg.

Remove explicit filter check since it is done elsewhere

Fix the image test helpers

Update the transform pkg

Fix util pkg

Update viewer pkg
 2014-12-23 16:51:06 -06:00
Steven Silvester a4e4e57ba5 Create new expected_warnings helper and some cleanup 
Add new helper function for expected warnings during test

Indentation cleanups and avoid skipping doctests if possible.
 2014-12-23 16:50:18 -06:00
Steven Silvester 782ba46a4c Handle more warnings 
Punt on the issue of warnings with the minimum build

Handle warnings in measure pkg

Fix the rank filter test by forcing a random seed in the function

Compare as boolean in imread test

Import loadmat in test_setup to avoid warning

Use a setup method for imread plugin test

Revoke unintended changes

Fix indentation to appease jni

More indentation fixes

Fix unintentional comment out
 2014-12-23 16:49:59 -06:00
Steven Silvester 6db92d387b More doctest and pil_plugin fixes 
Fix Python2 imread in pil_plugin.

Load from data

Use all_warnings when importing the other packages

More fixes for regionprops doctest
 2014-12-23 16:49:38 -06:00
Steven Silvester 4680f30466 Add a test setup helper function 
Add a function to set up a skimage test

Switch to new test helper function

Import local packages that raise warnings in test setup function

More fixes to doctests

Fix regionprops doc test

Try and fix the test_rank failure.

Remove no longer needed RectangleSelector shim

Skip more doctests in _regionprops

Try importing another scipy subpackage
 2014-12-23 16:49:20 -06:00
Steven Silvester 542cd4fabe Fix some doctest warnings 
Fix doctest errors

Suppress warnings when importing scipy.ndimage for the first time
 2014-12-23 16:49:01 -06:00
Steven Silvester 2756358f3c Clean up PIL plugin and handle more warnings 
Use the pil plugin to load data files

Fix install_requires string formatting

Dead end commit

Make all tools executable

Remove debug print

Suppress PIL resourcewarnings

Handle a few more warnings
 2014-12-23 16:48:38 -06:00
Pratap Vardhan b72a960670 DOC: Misc spell corrections 2014-12-16 11:41:24 +05:30
Johannes Schönberger 125d53ba52 Add test cases for invalid block sizes 2014-12-15 09:50:10 +01:00
Johannes Schönberger 813142baf8 Check for invalid upsampling block sizes 2014-12-15 09:50:07 +01:00
Johannes Schönberger 3a1079a180 Misc PEP8 fixes 2014-12-14 02:56:14 +01:00
emmanuelle 873a2bab4f Modified a few docstrings that made doctesting fail 2014-12-07 16:58:36 +01:00
Stefan van der Walt 36aa4cdb6f Merge pull request #1254 from matejak/label3d 
Refactor labeling and extend to 3D
 2014-12-04 12:31:29 +02:00
Jacopo 77a78a287c Updated docs for regionprops to reflect the dropping of regions with label value 0 2014-12-03 11:09:46 +10:00
Matěj Týč c6ebe6c661 Removed negative connectivity support as requested 2014-12-02 22:34:04 +01:00
Matěj Týč e41bff898a Added fix for the strange input array shapes + tests 2014-11-28 16:45:52 +01:00
Johannes Schönberger 8a67733567 Add encoding header 2014-11-26 18:26:34 -05:00
Johannes Schönberger fc0a6064d7 Use uint8 type for simple moments functions 2014-11-26 17:08:42 -05:00
Johannes Schönberger 71a5437794 Add fused type specialization for moments functions 2014-11-26 17:03:50 -05:00
Matěj Týč 3b4425813b Streamlined connectivity vs neighbors handling 2014-11-25 00:37:19 +01:00
Matěj Týč ac11b61502 Fixed typos, added array shape checking 2014-11-23 23:45:32 +01:00
Matěj Týč d07caea5a8 Mended code style 2014-11-23 23:17:01 +01:00
Matěj Týč a4b841daf0 Fixed bugs 2014-11-19 23:16:33 +01:00
Matěj Týč 53e1912854 Merge branch 'label3d' of https://github.com/matejak/scikit-image into label3d 2014-11-19 23:03:07 +01:00
Matěj Týč fe4a9b5847 Made the scan code cleaner and faster (but longer) 2014-11-19 23:02:34 +01:00
Matěj Týč 20755da3fe Fixed typos and made some style fixes 2014-11-19 21:32:27 +01:00
Matěj Týč 06c46ec51e Introduced the connectivity parameter, regrouped some code 2014-11-18 23:45:54 +01:00
Matěj Týč abf3dbc593 Added and tested proper exception handling concerning array shape 2014-11-16 15:33:13 +01:00
Matěj Týč eb55d177c3 Removed declaration of deceased function 2014-11-15 17:11:45 +01:00
Matěj Týč d29831882d Redone the background handling = considerable speedup 2014-11-15 16:42:22 +01:00
Matěj Týč 67464e2081 Fixed a typo + cleaned the code semantics 2014-11-15 16:11:31 +01:00
Matěj Týč 7c7ecc4bdc Mainly typo fixes 2014-11-11 21:49:57 +01:00
Matěj Týč 438a9355d6 Fixed bugs so test pass now 2014-11-11 00:39:49 +01:00
Matěj Týč 815ea29d26 Added some comments + requested reformatting 2014-10-29 00:58:01 +01:00
Matěj Týč 416f3a2eb5 numpy 1.6 compat fix 2014-10-27 23:33:59 +01:00
Matěj Týč 152a6d0de8 Fixed typos + added docstrings and comments 2014-10-27 22:37:04 +01:00
Matěj Týč 98047f5ce8 Cython minor fixes 2014-10-26 23:38:12 +01:00