Moving functions around into the new framework. Added requiresProblem annotation.

SimPEG/forward/Data.py

@@ -1,6 +1,37 @@
 from SimPEG import utils
 
 
+def requiresProblem(f):
+    """
+    Use this to wrap a funciton::
+
+        @requiresProblem
+        def dpred(self):
+            pass
+
+    This wrapper will ensure that a problem has been bound to the data.
+    If a problem is not bound an Exception will be raised, and an nice error message printed.
+    """
+    extra = """
+        This function requires that a problem be bound to the data.
+        If a problem has not been bound, an Exception will be raised.
+        To bind a problem to the Data object::
+
+            data.setProblem(myProblem)
+    """
+    from functools import wraps
+    @wraps(f)
+    def requiresProblemWrapper(self,*args,**kwargs):
+        if getattr(self, 'prob', None) is None:
+            raise Exception(extra)
+        return f(self,*args,**kwargs)
+
+    doc = requiresProblemWrapper.__doc__
+    requiresProblemWrapper.__doc__ = ('' if doc is None else doc) + extra
+
+    return requiresProblemWrapper
+
+
 class SimPEGData(object):
     """Data holds the observed data, and the standard deviations."""
 
@@ -10,11 +41,55 @@ class SimPEGData(object):
     dobs = None   #: Observed data
     dtrue = None  #: True data, if data is synthetic
     mtrue = None  #: True model, if data is synthetic
+    prob = None   #: The geophysical problem that explains this data
 
-    def __init__(self, prob, **kwargs):
+
+    def __init__(self, **kwargs):
         utils.setKwargs(self, **kwargs)
-        self.prob = prob
 
     def isSynthetic(self):
         "Check if the data is synthetic."
-        return self.mtrue is not None
+        return (self.mtrue is not None)
+
+    def setProblem(self, prob):
+        self.prob = prob
+
+    @property
+    def Wd(self):
+        """
+            Standard deviation weighting matrix.
+
+            By default, this is based on the norm of the data plus a noise floor.
+
+        """
+        if getattr(self,'_Wd',None) is None:
+            eps = np.linalg.norm(utils.mkvc(self.dobs),2)*1e-5
+            self._Wd = 1/(abs(self.dobs)*self.std+eps)
+        return self._Wd
+    @Wd.setter
+    def Wd(self, value):
+        self._Wd = value
+
+    @requiresProblem
+    def dpred(self, m, u=None):
+        pass
+
+    def residual(self, m, u=None):
+        pass
+
+    def residualWeighted(self, m, u=None):
+        pass
+
+    def projectField(self, m, u=None):
+        """
+            Projection matrix.
+
+            .. math::
+                d_\\text{pred} = Pu(m)
+        """
+        return self.P*u
+
+
+if __name__ == '__main__':
+    d = SimPEGData()
+    d.dpred()

SimPEG/forward/Problem.py

@@ -55,19 +55,6 @@ class Problem(object):
     def RHS(self, value):
         self._RHS = value
 
-    @property
-    def P(self):
-        """
-            Projection matrix.
-
-            .. math::
-                d_\\text{pred} = Pu(m)
-        """
-        return self._P
-    @P.setter
-    def P(self, value):
-        self._P = value
-
     @utils.count
     def dpred(self, m, u=None):
         """

SimPEG/inverse/Inversion.py

@@ -42,19 +42,6 @@ class BaseInversion(object):
             opt.bfgsH0 = SimPEG.Solver(reg.modelObj2Deriv())
 
 
-    @property
-    def Wd(self):
-        """
-            Standard deviation weighting matrix.
-        """
-        if getattr(self,'_Wd',None) is None:
-            eps = np.linalg.norm(utils.mkvc(self.data.dobs),2)*1e-5
-            self._Wd = 1/(abs(self.data.dobs)*self.data.std+eps)
-        return self._Wd
-    @Wd.setter
-    def Wd(self, value):
-        self._Wd = value
-
     @property
     def phi_d_target(self):
         """

SimPEG/utils/__init__.py

@@ -98,7 +98,7 @@ def callHooks(match, mainFirst=False):
         def doEndIteration(self):
             pass
 
-    This will call everything named _doEndIteration* at the beginning of the function call.  
+    This will call everything named _doEndIteration* at the beginning of the function call.
     By default the master method (doEndIteration) is run after all of the sub methods (_doEndIteration*).
     This can be reversed by adding the mainFirst=True kwarg.
     """
@@ -131,10 +131,8 @@ def callHooks(match, mainFirst=False):
             Where the * can be any string. If present, _%s* will be called at the start of the default %s call.
             You may also completely overwrite this function.
         """ % (match, match, match, match)
-        try:
-            wrapper.__doc__ += extra
-        except Exception, e:
-            pass
+        doc = wrapper.__doc__
+        wrapper.__doc__ = ('' if doc is None else doc) + extra
         return wrapper
     return callHooksWrap