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https://github.com/wassname/simpeg.git
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pair data-problem
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+27
-5
@@ -7,7 +7,6 @@ class BaseData(object):
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__metaclass__ = Utils.Save.Savable
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prob = None #: The geophysical problem that explains this data, use data.setProblem(prob)
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std = None #: Estimated Standard Deviations
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dobs = None #: Observed data
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dtrue = None #: True data, if data is synthetic
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@@ -18,10 +17,32 @@ class BaseData(object):
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def __init__(self, **kwargs):
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Utils.setKwargs(self, **kwargs)
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def setProblem(self, prob):
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# Bind these two instances together using pointers
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self.prob = prob
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prob.data = self
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@property
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def prob(self):
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"""
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The geophysical problem that explains this data, use::
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data.setProblem(prob)
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"""
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return getattr(self, '_prob', None)
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def pair(self, p):
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"""Bind a problem to this data instance using pointers"""
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assert hasattr(p, 'dataPair'), "Problem must have an attribute 'dataPair'."
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assert isinstance(self, p.dataPair), "Problem requires data object must be an instance of a %s class."%(p.dataPair.__name__)
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if p.ispaired:
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raise Exception("The problem object is already paired to a data. Use prob.unpair()")
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self._prob = p
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p._data = self
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def unpair(self):
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"""Unbind a problem from this data instance"""
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if not self.ispaired: return
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self.prob._data = None
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self._prob = None
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@property
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def ispaired(self): return self.prob is not None
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@Utils.count
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@Utils.requires('prob')
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@@ -117,6 +138,7 @@ class BaseData(object):
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def RHS(self, value):
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self._RHS = value
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@property
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def isSynthetic(self):
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"Check if the data is synthetic."
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return (self.mtrue is not None)
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@@ -2,6 +2,7 @@ import SimPEG
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from SimPEG import Utils, sp, np
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from Optimization import Remember, IterationPrinters, StoppingCriteria
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class BaseInversion(object):
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"""BaseInversion(prob, reg, opt, data, **kwargs)
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"""
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+29
-5
@@ -1,5 +1,6 @@
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from SimPEG import Utils, np, sp, Data
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norm = np.linalg.norm
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import Utils, Data
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import scipy.sparse as sp
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import numpy as np
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class BaseProblem(object):
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@@ -41,12 +42,35 @@ class BaseProblem(object):
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dataPair = Data.BaseData
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def __init__(self, mesh, model, *args, **kwargs):
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Utils.setKwargs(self, **kwargs)
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self.mesh = mesh
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self.model = model
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@property
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def data(self):
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"""
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The data object for this problem. Data
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"""
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return getattr(self, '_data', None)
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def pair(self, d):
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"""Bind a data to this problem instance using pointers."""
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assert isinstance(d, self.dataPair), "Data object must be an instance of a %s class."%(self.dataPair.__name__)
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if d.ispaired:
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raise Exception("The data object is already paired to a problem. Use data.unpair()")
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self._data = d
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d._prob = self
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def unpair(self):
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"""Unbind a data from this problem instance."""
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if not self.ispaired: return
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self.data._prob = None
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self._data = None
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@property
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def ispaired(self): return self.data is not None
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@Utils.timeIt
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def J(self, m, v, u=None):
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"""
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@@ -143,8 +167,8 @@ class BaseProblem(object):
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and Wd which is the same size as data, and can be used to weight the inversion.
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"""
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data = self.dataPair(mtrue=m, **geometry_kwargs)
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data.setProblem(self)
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data.dtrue = self.data.dpred(m,u=u)
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data.pair(self)
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data.dtrue = data.dpred(m, u=u)
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noise = std*abs(data.dtrue)*np.random.randn(*data.dtrue.shape)
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data.dobs = data.dtrue+noise
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data.std = data.dobs*0 + std
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