Merge pull request #34 from simpeg/SrcIntegration

Src integration: Inside of the source definitions, there is now the option of whether to integrate the source term by multiplying with an edge inner product matrix
This commit is contained in:
Lindsey
2015-10-07 20:56:57 -07:00
9 changed files with 236 additions and 49 deletions
+4 -2
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@@ -2,6 +2,8 @@ language: python
python:
- 2.7
sudo: false
# Setup anaconda
before_install:
- if [ ${TRAVIS_PYTHON_VERSION:0:1} == "2" ]; then wget http://repo.continuum.io/miniconda/Miniconda-3.8.3-Linux-x86_64.sh -O miniconda.sh; else wget http://repo.continuum.io/miniconda/Miniconda3-3.8.3-Linux-x86_64.sh -O miniconda.sh; fi
@@ -10,8 +12,8 @@ before_install:
- export PATH=/home/travis/anaconda/bin:/home/travis/miniconda/bin:$PATH
- conda update --yes conda
# The next couple lines fix a crash with multiprocessing on Travis and are not specific to using Miniconda
- sudo rm -rf /dev/shm
- sudo ln -s /run/shm /dev/shm
# - sudo rm -rf /dev/shm
# - sudo ln -s /run/shm /dev/shm
# Install packages
install:
+2 -2
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@@ -124,13 +124,13 @@ E-B Formulation:
.. math ::
\mathbf{C} \mathbf{e} + i \omega \mathbf{b} = \mathbf{s_m} \\
\mathbf{C^T} \mathbf{M^f_{\mu^{-1}}} \mathbf{b} - \mathbf{M^e_\sigma} \mathbf{e} = \mathbf{s_e}
\mathbf{C^T} \mathbf{M^f_{\mu^{-1}}} \mathbf{b} - \mathbf{M^e_\sigma} \mathbf{e} = \mathbf{M^e} \mathbf{s_e}
H-J Formulation:
****************
.. math ::
\mathbf{C^T} \mathbf{M^f_\rho} \mathbf{j} + i \omega \mathbf{M^e_\mu} \mathbf{h} = \mathbf{s_m} \\
\mathbf{C^T} \mathbf{M^f_\rho} \mathbf{j} + i \omega \mathbf{M^e_\mu} \mathbf{h} = \mathbf{M^e} \mathbf{s_m} \\
\mathbf{C} \mathbf{h} - \mathbf{j} = \mathbf{s_e}
+1 -1
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@@ -42,7 +42,7 @@ def hzAnalyticDipoleF(r, freq, sigma, secondary=True, mu=mu_0):
return hz
def AnalyticMagDipoleWholeSpace(XYZ, srcLoc, sig, f, moment=1., orientation='X', mu = mu_0):
def MagneticDipoleWholeSpace(XYZ, srcLoc, sig, f, moment=1., orientation='X', mu = mu_0):
"""
Analytical solution for a dipole in a whole-space.
+37 -23
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@@ -15,7 +15,7 @@ class BaseFDEMProblem(BaseEMProblem):
.. math ::
\mathbf{C} \mathbf{e} + i \omega \mathbf{b} = \mathbf{s_m} \\\\
{\mathbf{C}^T \mathbf{M_{\mu^{-1}}^f} \mathbf{b} - \mathbf{M_{\sigma}^e} \mathbf{e} = \mathbf{s_e}}
{\mathbf{C}^T \mathbf{M_{\mu^{-1}}^f} \mathbf{b} - \mathbf{M_{\sigma}^e} \mathbf{e} = \mathbf{M^e} \mathbf{s_e}}
if using the E-B formulation (:code:`ProblemFDEM_e`
or :code:`ProblemFDEM_b`) or the magnetic field
@@ -23,7 +23,7 @@ class BaseFDEMProblem(BaseEMProblem):
.. math ::
\mathbf{C}^T \mathbf{M_{\\rho}^f} \mathbf{j} + i \omega \mathbf{M_{\mu}^e} \mathbf{h} = \mathbf{s_m} \\\\
\mathbf{C}^T \mathbf{M_{\\rho}^f} \mathbf{j} + i \omega \mathbf{M_{\mu}^e} \mathbf{h} = \mathbf{M^e} \mathbf{s_m} \\\\
\mathbf{C} \mathbf{h} - \mathbf{j} = \mathbf{s_e}
if using the H-J formulation (:code:`ProblemFDEM_j` or :code:`ProblemFDEM_h`).
@@ -198,7 +198,7 @@ class ProblemFDEM_e(BaseFDEMProblem):
.. math ::
\\left(\mathbf{C}^T \mathbf{M_{\mu^{-1}}^f} \mathbf{C}+ i \omega \mathbf{M^e_{\sigma}} \\right)\mathbf{e} = \mathbf{C}^T \mathbf{M_{\mu^{-1}}^f}\mathbf{s_m} -i\omega\mathbf{s_e}
\\left(\mathbf{C}^T \mathbf{M_{\mu^{-1}}^f} \mathbf{C}+ i \omega \mathbf{M^e_{\sigma}} \\right)\mathbf{e} = \mathbf{C}^T \mathbf{M_{\mu^{-1}}^f}\mathbf{s_m} -i\omega\mathbf{M^e}\mathbf{s_e}
which we solve for \\\(\\\mathbf{e}\\\).
"""
@@ -238,7 +238,7 @@ class ProblemFDEM_e(BaseFDEMProblem):
def getRHS(self, freq):
"""
.. math ::
\mathbf{RHS} = \mathbf{C}^T \mathbf{M_{\mu^{-1}}^f}\mathbf{s_m} -i\omega\mathbf{s_e}
\mathbf{RHS} = \mathbf{C}^T \mathbf{M_{\mu^{-1}}^f}\mathbf{s_m} -i\omega\mathbf{M_e}\mathbf{s_e}
:param float freq: Frequency
:rtype: numpy.ndarray (nE, nSrc)
@@ -246,16 +246,20 @@ class ProblemFDEM_e(BaseFDEMProblem):
"""
S_m, S_e = self.getSourceTerm(freq)
# if self.survey.
# Me = self.Me
C = self.mesh.edgeCurl
MfMui = self.MfMui
RHS = C.T * (MfMui * S_m) -1j*omega(freq)*S_e
# RHS = C.T * (MfMui * S_m) -1j * omega(freq) * Me * S_e
RHS = C.T * (MfMui * S_m) -1j * omega(freq) * S_e
return RHS
def getRHSDeriv_m(self, src, v, adjoint=False):
C = self.mesh.edgeCurl
MfMui = self.MfMui
# Me = self.Me
S_mDeriv, S_eDeriv = src.evalDeriv(self, adjoint)
if adjoint:
@@ -263,22 +267,22 @@ class ProblemFDEM_e(BaseFDEMProblem):
S_mDerivv = S_mDeriv(dRHS)
S_eDerivv = S_eDeriv(v)
if S_mDerivv is not None and S_eDerivv is not None:
return S_mDerivv - 1j*omega(freq)*S_eDerivv
return S_mDerivv - 1j * omega(freq) * S_eDerivv
elif S_mDerivv is not None:
return S_mDerivv
elif S_eDerivv is not None:
return - 1j*omega(freq)*S_eDerivv
return - 1j * omega(freq) * S_eDerivv
else:
return None
else:
S_mDerivv, S_eDerivv = S_mDeriv(v), S_eDeriv(v)
if S_mDerivv is not None and S_eDerivv is not None:
return C.T * (MfMui * S_mDerivv) -1j*omega(freq)*S_eDerivv
return C.T * (MfMui * S_mDerivv) -1j * omega(freq) * S_eDerivv
elif S_mDerivv is not None:
return C.T * (MfMui * S_mDerivv)
elif S_eDerivv is not None:
return -1j*omega(freq)*S_eDerivv
return -1j * omega(freq) * S_eDerivv
else:
return None
@@ -295,7 +299,7 @@ class ProblemFDEM_b(BaseFDEMProblem):
.. math ::
\\left(\mathbf{C} \mathbf{M^e_{\sigma}}^{-1} \mathbf{C}^T \mathbf{M_{\mu^{-1}}^f} + i \omega \\right)\mathbf{b} = \mathbf{s_m} + \mathbf{M^e_{\sigma}}^{-1}\mathbf{s_e}
\\left(\mathbf{C} \mathbf{M^e_{\sigma}}^{-1} \mathbf{C}^T \mathbf{M_{\mu^{-1}}^f} + i \omega \\right)\mathbf{b} = \mathbf{s_m} + \mathbf{M^e_{\sigma}}^{-1}\mathbf{M^e}\mathbf{s_e}
.. note ::
The inverse problem will not work with full anisotropy
@@ -323,7 +327,7 @@ class ProblemFDEM_b(BaseFDEMProblem):
C = self.mesh.edgeCurl
iomega = 1j * omega(freq) * sp.eye(self.mesh.nF)
A = C*MeSigmaI*C.T*MfMui + iomega
A = C * (MeSigmaI * (C.T * MfMui)) + iomega
if self._makeASymmetric is True:
return MfMui.T*A
@@ -334,7 +338,7 @@ class ProblemFDEM_b(BaseFDEMProblem):
MfMui = self.MfMui
C = self.mesh.edgeCurl
MeSigmaIDeriv = self.MeSigmaIDeriv
vec = C.T*(MfMui*u)
vec = C.T * (MfMui * u)
MeSigmaIDeriv = MeSigmaIDeriv(vec)
@@ -361,12 +365,13 @@ class ProblemFDEM_b(BaseFDEMProblem):
S_m, S_e = self.getSourceTerm(freq)
C = self.mesh.edgeCurl
MeSigmaI = self.MeSigmaI
# Me = self.Me
RHS = S_m + C * ( MeSigmaI * S_e )
if self._makeASymmetric is True:
MfMui = self.MfMui
return MfMui.T*RHS
return MfMui.T * RHS
return RHS
@@ -374,12 +379,13 @@ class ProblemFDEM_b(BaseFDEMProblem):
C = self.mesh.edgeCurl
S_m, S_e = src.eval(self)
MfMui = self.MfMui
# Me = self.Me
if self._makeASymmetric and adjoint:
v = self.MfMui * v
if S_e is not None:
MeSigmaIDeriv = self.MeSigmaIDeriv(Utils.mkvc(S_e))
MeSigmaIDeriv = self.MeSigmaIDeriv(S_e)
if not adjoint:
RHSderiv = C * (MeSigmaIDeriv * v)
elif adjoint:
@@ -428,13 +434,13 @@ class ProblemFDEM_j(BaseFDEMProblem):
.. math ::
\mathbf{h} = \\frac{1}{i \omega} \mathbf{M_{\mu}^e}^{-1} \\left(-\mathbf{C}^T \mathbf{M_{\\rho}^f} \mathbf{j} + \mathbf{s_m} \\right)
\mathbf{h} = \\frac{1}{i \omega} \mathbf{M_{\mu}^e}^{-1} \\left(-\mathbf{C}^T \mathbf{M_{\\rho}^f} \mathbf{j} + \mathbf{M^e} \mathbf{s_m} \\right)
and solve for \\\(\\\mathbf{j}\\\) using
.. math ::
\\left(\mathbf{C} \mathbf{M_{\mu}^e}^{-1} \mathbf{C}^T \mathbf{M_{\\rho}^f} + i \omega\\right)\mathbf{j} = \mathbf{C} \mathbf{M_{\mu}^e}^{-1}\mathbf{s_m} -i\omega\mathbf{s_e}
\\left(\mathbf{C} \mathbf{M_{\mu}^e}^{-1} \mathbf{C}^T \mathbf{M_{\\rho}^f} + i \omega\\right)\mathbf{j} = \mathbf{C} \mathbf{M_{\mu}^e}^{-1} \mathbf{M^e} \mathbf{s_m} -i\omega\mathbf{s_e}
.. note::
This implementation does not yet work with full anisotropy!!
@@ -507,7 +513,8 @@ class ProblemFDEM_j(BaseFDEMProblem):
S_m, S_e = self.getSourceTerm(freq)
C = self.mesh.edgeCurl
MeMuI = self.MeMuI
MeMuI = self.MeMuI
# Me = self.Me
RHS = C * (MeMuI * S_m) - 1j * omega(freq) * S_e
@@ -520,6 +527,7 @@ class ProblemFDEM_j(BaseFDEMProblem):
def getRHSDeriv_m(self, src, v, adjoint=False):
C = self.mesh.edgeCurl
MeMuI = self.MeMuI
# Me = self.Me
S_mDeriv, S_eDeriv = src.evalDeriv(self, adjoint)
if adjoint:
@@ -529,11 +537,11 @@ class ProblemFDEM_j(BaseFDEMProblem):
S_mDerivv = S_mDeriv(MeMuI.T * (C.T * v))
S_eDerivv = S_eDeriv(v)
if S_mDerivv is not None and S_eDerivv is not None:
return S_mDerivv - 1j*omega(freq)*S_eDerivv
return S_mDerivv - 1j * omega(freq) * S_eDerivv
elif S_mDerivv is not None:
return S_mDerivv
elif S_eDerivv is not None:
return - 1j*omega(freq)*S_eDerivv
return - 1j * omega(freq) * S_eDerivv
else:
return None
else:
@@ -568,7 +576,7 @@ class ProblemFDEM_h(BaseFDEMProblem):
.. math ::
\\left(\mathbf{C}^T \mathbf{M_{\\rho}^f} \mathbf{C} + i \omega \mathbf{M_{\mu}^e}\\right) \mathbf{h} = \mathbf{s_m} + \mathbf{C}^T \mathbf{M_{\\rho}^f} \mathbf{s_e}
\\left(\mathbf{C}^T \mathbf{M_{\\rho}^f} \mathbf{C} + i \omega \mathbf{M_{\mu}^e}\\right) \mathbf{h} = \mathbf{M^e} \mathbf{s_m} + \mathbf{C}^T \mathbf{M_{\\rho}^f} \mathbf{s_e}
"""
@@ -594,7 +602,7 @@ class ProblemFDEM_h(BaseFDEMProblem):
MfRho = self.MfRho
C = self.mesh.edgeCurl
return C.T * MfRho * C + 1j*omega(freq)*MeMu
return C.T * (MfRho * C) + 1j*omega(freq)*MeMu
def getADeriv_m(self, freq, u, v, adjoint=False):
@@ -610,7 +618,7 @@ class ProblemFDEM_h(BaseFDEMProblem):
"""
.. math ::
\mathbf{RHS} = \mathbf{s_m} + \mathbf{C}^T \mathbf{M_{\\rho}^f} \mathbf{s_e}
\mathbf{RHS} = \mathbf{M^e} \mathbf{s_m} + \mathbf{C}^T \mathbf{M_{\\rho}^f} \mathbf{s_e}
:param float freq: Frequency
:rtype: numpy.ndarray (nE, nSrc)
@@ -620,6 +628,7 @@ class ProblemFDEM_h(BaseFDEMProblem):
S_m, S_e = self.getSourceTerm(freq)
C = self.mesh.edgeCurl
MfRho = self.MfRho
# Me = self.Me
RHS = S_m + C.T * ( MfRho * S_e )
@@ -629,6 +638,7 @@ class ProblemFDEM_h(BaseFDEMProblem):
_, S_e = src.eval(self)
C = self.mesh.edgeCurl
MfRho = self.MfRho
Me = self.Me
RHSDeriv = None
@@ -643,11 +653,15 @@ class ProblemFDEM_h(BaseFDEMProblem):
S_mDeriv = S_mDeriv(v)
S_eDeriv = S_eDeriv(v)
if adjoint:
Me = Me.T
if S_mDeriv is not None:
if RHSDeriv is not None:
RHSDeriv += S_mDeriv(v)
else:
RHSDeriv = S_mDeriv(v)
RHSDeriv = S_mDeriv(v)
if S_eDeriv is not None:
if RHSDeriv is not None:
RHSDeriv += C.T * (MfRho * S_e)
+15 -14
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@@ -109,6 +109,7 @@ class FieldsFDEM_b(FieldsFDEM):
self._MeSigmaI = self.survey.prob.MeSigmaI
self._MfMui = self.survey.prob.MfMui
self._MeSigmaIDeriv = self.survey.prob.MeSigmaIDeriv
self._Me = self.survey.prob.Me
def _bPrimary(self, bSolution, srcList):
bPrimary = np.zeros_like(bSolution)
@@ -144,7 +145,7 @@ class FieldsFDEM_b(FieldsFDEM):
for i,src in enumerate(srcList):
_,S_e = src.eval(self.prob)
if S_e is not None:
e[:,i] += -self._MeSigmaI*S_e
e[:,i] += -self._MeSigmaI * S_e
return e
def _eSecondaryDeriv_u(self, src, v, adjoint=False):
@@ -156,10 +157,14 @@ class FieldsFDEM_b(FieldsFDEM):
def _eSecondaryDeriv_m(self, src, v, adjoint=False):
bSolution = self[[src],'bSolution']
_,S_e = src.eval(self.prob)
Me = self._Me
if adjoint:
Me = Me.T
w = self._edgeCurl.T * (self._MfMui * bSolution)
if S_e is not None:
w += -Utils.mkvc(S_e,2)
w += -Utils.mkvc(Me * S_e,2)
if not adjoint:
de_dm = self._MeSigmaIDeriv(w) * v
@@ -205,6 +210,7 @@ class FieldsFDEM_j(FieldsFDEM):
self._MeMuI = self.survey.prob.MeMuI
self._MfRho = self.survey.prob.MfRho
self._MfRhoDeriv = self.survey.prob.MfRhoDeriv
self._Me = self.survey.prob.Me
def _jPrimary(self, jSolution, srcList):
jPrimary = np.zeros_like(jSolution,dtype = complex)
@@ -236,25 +242,19 @@ class FieldsFDEM_j(FieldsFDEM):
return hPrimary
def _hSecondary(self, jSolution, srcList):
MeMuI = self._MeMuI
C = self._edgeCurl
MfRho = self._MfRho
h = MeMuI * (C.T * (MfRho * jSolution) )
h = self._MeMuI * (self._edgeCurl.T * (self._MfRho * jSolution) )
for i, src in enumerate(srcList):
h[:,i] *= -1./(1j*omega(src.freq))
S_m,_ = src.eval(self.prob)
if S_m is not None:
h[:,i] += 1./(1j*omega(src.freq)) * MeMuI * S_m
h[:,i] += 1./(1j*omega(src.freq)) * self._MeMuI * (S_m)
return h
def _hSecondaryDeriv_u(self, src, v, adjoint=False):
MeMuI = self._MeMuI
C = self._edgeCurl
MfRho = self._MfRho
if not adjoint:
return -1./(1j*omega(src.freq)) * MeMuI * (C.T * (MfRho * v) )
return -1./(1j*omega(src.freq)) * self._MeMuI * (self._edgeCurl.T * (self._MfRho * v) )
elif adjoint:
return -1./(1j*omega(src.freq)) * MfRho.T * (C * ( MeMuI.T * v))
return -1./(1j*omega(src.freq)) * self._MfRho.T * (self._edgeCurl * ( self._MeMuI.T * v))
def _hSecondaryDeriv_m(self, src, v, adjoint=False):
jSolution = self[[src],'jSolution']
@@ -262,6 +262,7 @@ class FieldsFDEM_j(FieldsFDEM):
C = self._edgeCurl
MfRho = self._MfRho
MfRhoDeriv = self._MfRhoDeriv
Me = self._Me
if not adjoint:
hDeriv_m = -1./(1j*omega(src.freq)) * MeMuI * (C.T * (MfRhoDeriv(jSolution)*v ) )
@@ -273,9 +274,9 @@ class FieldsFDEM_j(FieldsFDEM):
if not adjoint:
S_mDeriv = S_mDeriv(v)
if S_mDeriv is not None:
hDeriv_m += 1./(1j*omega(src.freq)) * MeMuI * S_mDeriv
hDeriv_m += 1./(1j*omega(src.freq)) * MeMuI * (Me * S_mDeriv)
elif adjoint:
S_mDeriv = S_mDeriv(MeMuI.T * v)
S_mDeriv = S_mDeriv(Me.T * (MeMuI.T * v))
if S_mDeriv is not None:
hDeriv_m += 1./(1j*omega(src.freq)) * S_mDeriv
return hDeriv_m
+12 -3
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@@ -94,6 +94,7 @@ class RxFDEM(Survey.BaseRx):
class SrcFDEM(Survey.BaseSrc):
freq = None
rxPair = RxFDEM
integrate = True
def eval(self, prob):
S_m = self.S_m(prob)
@@ -155,9 +156,10 @@ class SrcFDEM_RawVec_m(SrcFDEM):
:param rxList: receiver list
"""
def __init__(self, rxList, freq, S_m):
def __init__(self, rxList, freq, S_m, integrate = True):
self._S_m = np.array(S_m,dtype=complex)
self.freq = float(freq)
self.integrate = integrate
SrcFDEM.__init__(self, rxList)
def S_m(self, prob):
@@ -173,16 +175,21 @@ class SrcFDEM_RawVec(SrcFDEM):
:param float freq: frequency
:param rxList: receiver list
"""
def __init__(self, rxList, freq, S_m, S_e):
def __init__(self, rxList, freq, S_m, S_e, integrate = True):
self._S_m = np.array(S_m,dtype=complex)
self._S_e = np.array(S_e,dtype=complex)
self.freq = float(freq)
self.integrate = integrate
SrcFDEM.__init__(self, rxList)
def S_m(self, prob):
if prob._eqLocs is 'EF' and self.integrate is True:
return prob.Me * self._S_m
return self._S_m
def S_e(self, prob):
if prob._eqLocs is 'FE' and self.integrate is True:
return prob.Me * self._S_e
return self._S_e
@@ -194,7 +201,8 @@ class SrcFDEM_MagDipole(SrcFDEM):
self.loc = loc
self.orientation = orientation
self.moment = moment
self.mu = mu
self.mu = mu
self.integrate = False
SrcFDEM.__init__(self, rxList)
def bPrimary(self, prob):
@@ -332,6 +340,7 @@ class SrcFDEM_CircularLoop(SrcFDEM):
self.radius = radius
self.mu = mu
self.loc = loc
self.integrate = False
SrcFDEM.__init__(self, rxList)
def bPrimary(self, prob):
+1 -1
View File
@@ -102,7 +102,7 @@ class SrcTDEM_CircularLoop_MVP(SrcTDEM):
def __init__(self,rxList,loc,radius):
self.loc = loc
self.radius =radius
self.radius = radius
SrcTDEM.__init__(self,rxList)
def getInitialFields(self, mesh):
+2 -2
View File
@@ -12,14 +12,14 @@ testHJ = True
verbose = False
TOL = 1e-4
TOL = 1e-5
FLR = 1e-20 # "zero", so if residual below this --> pass regardless of order
CONDUCTIVITY = 1e1
MU = mu_0
freq = 1e-1
addrandoms = True
SrcType = 'MagDipole' #or 'MAgDipole_Bfield', 'CircularLoop', 'RawVec'
SrcType = 'RawVec' #or 'MAgDipole_Bfield', 'CircularLoop', 'RawVec'
def getProblem(fdemType, comp):
+162 -1
View File
@@ -4,7 +4,11 @@ import simpegEM as EM
from scipy.constants import mu_0
plotIt = False
freq = 1e2
tol_EBdipole = 1e-2
if plotIt:
import matplotlib.pylab
class FDEM_analyticTests(unittest.TestCase):
@@ -13,6 +17,8 @@ class FDEM_analyticTests(unittest.TestCase):
cs = 10.
ncx, ncy, ncz = 10, 10, 10
npad = 4
freq = 1e2
hx = [(cs,npad,-1.3), (cs,ncx), (cs,npad,1.3)]
hy = [(cs,npad,-1.3), (cs,ncy), (cs,npad,1.3)]
hz = [(cs,npad,-1.3), (cs,ncz), (cs,npad,1.3)]
@@ -78,5 +84,160 @@ class FDEM_analyticTests(unittest.TestCase):
self.assertTrue(passed)
def test_CylMeshEBDipoles(self):
print 'Testing CylMesh Electric and Magnetic Dipoles in a wholespace- Analytic: J-formulation'
sigmaback = 1.
mur = 2.
freq = 1.
skdpth = 500./np.sqrt(sigmaback*freq)
csx, ncx, npadx = 5, 50, 25
csz, ncz, npadz = 5, 50, 25
hx = Utils.meshTensor([(csx,ncx), (csx,npadx,1.3)])
hz = Utils.meshTensor([(csz,npadz,-1.3), (csz,ncz), (csz,npadz,1.3)])
mesh = Mesh.CylMesh([hx,1,hz], [0.,0.,-hz.sum()/2]) # define the cylindrical mesh
if plotIt:
mesh.plotGrid()
# make sure mesh is big enough
self.assertTrue(mesh.hz.sum() > skdpth*2.)
self.assertTrue(mesh.hx.sum() > skdpth*2.)
SigmaBack = sigmaback*np.ones((mesh.nC))
MuBack = mur*mu_0*np.ones((mesh.nC))
# set up source
# test electric dipole
src_loc = np.r_[0.,0.,0.]
s_ind = Utils.closestPoints(mesh,src_loc,'Fz') + mesh.nFx
de = np.zeros(mesh.nF,dtype=complex)
de[s_ind] = 1./csz
de_p = [EM.FDEM.SrcFDEM_RawVec_e([],freq,de/mesh.area)]
dm_p = [EM.FDEM.SrcFDEM_MagDipole([],freq,src_loc)]
# Pair the problem and survey
surveye = EM.FDEM.SurveyFDEM(de_p)
surveym = EM.FDEM.SurveyFDEM(dm_p)
mapping = [('sigma', Maps.IdentityMap(mesh)),('mu', Maps.IdentityMap(mesh))]
prbe = EM.FDEM.ProblemFDEM_h(mesh, mapping=mapping)
prbm = EM.FDEM.ProblemFDEM_e(mesh, mapping=mapping)
prbe.pair(surveye) # pair problem and survey
prbm.pair(surveym)
# solve
fieldsBackE = prbe.fields(np.r_[SigmaBack, MuBack]) # Done
fieldsBackM = prbm.fields(np.r_[SigmaBack, MuBack]) # Done
rlim = [20.,500.]
lookAtTx = de_p
r = mesh.vectorCCx[np.argmin(np.abs(mesh.vectorCCx-rlim[0])):np.argmin(np.abs(mesh.vectorCCx-rlim[1]))]
z = 100.
# where we choose to measure
XYZ = Utils.ndgrid(r, np.r_[0.], np.r_[z])
Pf = mesh.getInterpolationMat(XYZ, 'CC')
Zero = sp.csr_matrix(Pf.shape)
Pfx,Pfz = sp.hstack([Pf,Zero]),sp.hstack([Zero,Pf])
jn = fieldsBackE[de_p,'j']
bn = fieldsBackM[dm_p,'b']
Rho = Utils.sdiag(1./SigmaBack)
Rho = sp.block_diag([Rho,Rho])
en = Rho*mesh.aveF2CCV*jn
bn = mesh.aveF2CCV*bn
ex,ez = Pfx*en, Pfz*en
bx,bz = Pfx*bn, Pfz*bn
# get analytic solution
exa, eya, eza = EM.Analytics.FDEM.ElectricDipoleWholeSpace(XYZ, src_loc, sigmaback, freq,orientation='Z',mu= mur*mu_0)
exa, eya, eza = Utils.mkvc(exa,2), Utils.mkvc(eya,2), Utils.mkvc(eza,2)
bxa, bya, bza = EM.Analytics.FDEM.MagneticDipoleWholeSpace(XYZ, src_loc, sigmaback, freq,orientation='Z',mu= mur*mu_0)
bxa, bya, bza = Utils.mkvc(bxa,2), Utils.mkvc(bya,2), Utils.mkvc(bza,2)
print ' comp, anayltic, numeric, num - ana, (num - ana)/ana'
print ' ex:', np.linalg.norm(exa), np.linalg.norm(ex), np.linalg.norm(exa-ex), np.linalg.norm(exa-ex)/np.linalg.norm(exa)
print ' ez:', np.linalg.norm(eza), np.linalg.norm(ez), np.linalg.norm(eza-ez), np.linalg.norm(eza-ez)/np.linalg.norm(eza)
print ' bx:', np.linalg.norm(bxa), np.linalg.norm(bx), np.linalg.norm(bxa-bx), np.linalg.norm(bxa-bx)/np.linalg.norm(bxa)
print ' bz:', np.linalg.norm(bza), np.linalg.norm(bz), np.linalg.norm(bza-bz), np.linalg.norm(bza-bz)/np.linalg.norm(bza)
if plotIt:
# Edipole
plt.subplot(221)
plt.plot(r,ex.real,'o',r,exa.real,linewidth=2)
plt.grid(which='both')
plt.title('Ex Real')
plt.xlabel('r (m)')
plt.subplot(222)
plt.plot(r,ex.imag,'o',r,exa.imag,linewidth=2)
plt.grid(which='both')
plt.title('Ex Imag')
plt.legend(['Num','Ana'],bbox_to_anchor=(1.5,0.5))
plt.xlabel('r (m)')
plt.subplot(223)
plt.plot(r,ez.real,'o',r,eza.real,linewidth=2)
plt.grid(which='both')
plt.title('Ez Real')
plt.xlabel('r (m)')
plt.subplot(224)
plt.plot(r,ez.imag,'o',r,eza.imag,linewidth=2)
plt.grid(which='both')
plt.title('Ez Imag')
plt.xlabel('r (m)')
plt.tight_layout()
# Bdipole
plt.subplot(221)
plt.plot(r,bx.real,'o',r,bxa.real,linewidth=2)
plt.grid(which='both')
plt.title('Bx Real')
plt.xlabel('r (m)')
plt.subplot(222)
plt.plot(r,bx.imag,'o',r,bxa.imag,linewidth=2)
plt.grid(which='both')
plt.title('Bx Imag')
plt.legend(['Num','Ana'],bbox_to_anchor=(1.5,0.5))
plt.xlabel('r (m)')
plt.subplot(223)
plt.plot(r,bz.real,'o',r,bza.real,linewidth=2)
plt.grid(which='both')
plt.title('Bz Real')
plt.xlabel('r (m)')
plt.subplot(224)
plt.plot(r,bz.imag,'o',r,bza.imag,linewidth=2)
plt.grid(which='both')
plt.title('Bz Imag')
plt.xlabel('r (m)')
plt.tight_layout()
self.assertTrue(np.linalg.norm(exa-ex)/np.linalg.norm(exa) < tol_EBdipole)
self.assertTrue(np.linalg.norm(eza-ez)/np.linalg.norm(eza) < tol_EBdipole)
self.assertTrue(np.linalg.norm(bxa-bx)/np.linalg.norm(bxa) < tol_EBdipole)
self.assertTrue(np.linalg.norm(bza-bz)/np.linalg.norm(bza) < tol_EBdipole)
if __name__ == '__main__':
unittest.main()