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Support for isotropic sigma
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@@ -1,6 +1,6 @@
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from scipy import sparse as sp
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from sputils import sdiag
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from utils import sub2ind, ndgrid
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from utils import sub2ind, ndgrid, mkvc
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import numpy as np
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@@ -21,7 +21,7 @@ def getEdgeInnerProduct(mesh, sigma):
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IND = np.r_[ind1, ind2, ind3].flatten()
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return sp.coo_matrix((np.ones(3*nc), (np.linspace(0, 3*nc-1, 3*nc), IND)), shape=(3*nc, np.sum(mesh.nE))).tocsr()
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return sp.coo_matrix((np.ones(3*nc), (range(3*nc), IND)), shape=(3*nc, np.sum(mesh.nE))).tocsr()
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# node(i,j,k+1) ------ edge2(i,j,k+1) ----- node(i,j+1,k+1)
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# / /
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@@ -57,15 +57,21 @@ def getEdgeInnerProduct(mesh, sigma):
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P011 = Pxxx([[0, 1, 1], [0, 0, 1], [0, 1, 0]])
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P111 = Pxxx([[0, 1, 1], [1, 0, 1], [1, 1, 0]])
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# Cell volume
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row1 = sp.hstack((sdiag(sigma[:, 0]), sdiag(sigma[:, 3]), sdiag(sigma[:, 4])))
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row2 = sp.hstack((sdiag(sigma[:, 3]), sdiag(sigma[:, 1]), sdiag(sigma[:, 5])))
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row3 = sp.hstack((sdiag(sigma[:, 4]), sdiag(sigma[:, 5]), sdiag(sigma[:, 2])))
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Sigma = sp.vstack((row1, row2, row3))
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if sigma.size == mesh.nC: # Isotropic!
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sigma = mkvc(sigma)
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Sigma = sdiag(np.r_[sigma, sigma, sigma])
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elif sigma.shape[1] == 3: # Diagonal tensor
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Sigma = sdiag(np.r_[sigma[:, 0], sigma[:, 1], sigma[:, 2]])
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elif sigma.shape[1] == 6: # Fully anisotropic
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row1 = sp.hstack((sdiag(sigma[:, 0]), sdiag(sigma[:, 3]), sdiag(sigma[:, 4])))
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row2 = sp.hstack((sdiag(sigma[:, 3]), sdiag(sigma[:, 1]), sdiag(sigma[:, 5])))
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row3 = sp.hstack((sdiag(sigma[:, 4]), sdiag(sigma[:, 5]), sdiag(sigma[:, 2])))
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Sigma = sp.vstack((row1, row2, row3))
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# Cell volume
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v = np.sqrt(mesh.vol)
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v3 = np.r_[v, v, v]
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V = sdiag(v3)*Sigma*sdiag(v3)
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V = sdiag(v3)*Sigma*sdiag(v3) # to keep symmetry
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A = P000.T*V*P000 + P001.T*V*P001 + P010.T*V*P010 + P011.T*V*P011 + P100.T*V*P100 + P101.T*V*P101 + P110.T*V*P110 + P111.T*V*P111
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@@ -73,10 +79,8 @@ def getEdgeInnerProduct(mesh, sigma):
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return A
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if __name__ == '__main__':
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from TensorMesh import *
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from TensorMesh import TensorMesh
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h = [np.array([1, 2, 3, 4]), np.array([1, 2, 1, 4, 2]), np.array([1, 1, 4, 1])]
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mesh = TensorMesh(h)
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sigma = np.ones((mesh.nC, 6))
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