Merge branch 'master' of https://github.com/simpeg/simpegem into em/dev

Conflicts:
	.coveragerc
	.gitignore
	.travis.yml
	docs/api_Utils.rst
	docs/conf.py
	docs/index.rst
	requirements.txt
	setup.py
This commit is contained in:
Rowan Cockett
2015-11-04 09:59:11 -08:00
37 changed files with 5141 additions and 0 deletions
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from __future__ import division
import numpy as np
from scipy.constants import mu_0, pi
from scipy.special import erf
import matplotlib.pyplot as plt
from SimPEG import Utils
def hzAnalyticDipoleF(r, freq, sigma, secondary=True, mu=mu_0):
"""
4.56 in Ward and Hohmann
.. plot::
import matplotlib.pyplot as plt
from SimPEG import EM
freq = np.logspace(-1, 6, 61)
test = EM.Analytics.FDEM.hzAnalyticDipoleF(100, freq, 0.001, secondary=False)
plt.loglog(freq, abs(test.real))
plt.loglog(freq, abs(test.imag))
plt.title('Response at $r$=100m')
plt.xlabel('Frequency')
plt.ylabel('Response')
plt.legend(('real','imag'))
plt.show()
"""
r = np.abs(r)
k = np.sqrt(-1j*2.*np.pi*freq*mu*sigma)
m = 1
front = m / (2. * np.pi * (k**2) * (r**5) )
back = 9 - ( 9 + 9j * k * r - 4 * (k**2) * (r**2) - 1j * (k**3) * (r**3)) * np.exp(-1j*k*r)
hz = front*back
if secondary:
hp =-1/(4*np.pi*r**3)
hz = hz-hp
if hz.ndim == 1:
hz = Utils.mkvc(hz,2)
return hz
def MagneticDipoleWholeSpace(XYZ, srcLoc, sig, f, moment=1., orientation='X', mu = mu_0):
"""
Analytical solution for a dipole in a whole-space.
Equation 2.57 of Ward and Hohmann
TODOs:
- set it up to instead take a mesh & survey
- add E-fields
- handle multiple frequencies
- add divide by zero safety
.. plot::
from SimPEG import EM
import matplotlib.pyplot as plt
freqs = np.logspace(-2,5,100)
Bx, By, Bz = EM.Analytics.FDEM.AnalyticMagDipoleWholeSpace([0,100,0], [0,0,0], 1e-2, freqs, m=1, orientation='Z')
plt.loglog(freqs, np.abs(Bz.real)/mu_0, 'b')
plt.loglog(freqs, np.abs(Bz.imag)/mu_0, 'r')
plt.legend(('real','imag'))
plt.show()
"""
XYZ = Utils.asArray_N_x_Dim(XYZ, 3)
dx = XYZ[:,0]-srcLoc[0]
dy = XYZ[:,1]-srcLoc[1]
dz = XYZ[:,2]-srcLoc[2]
r = np.sqrt( dx**2. + dy**2. + dz**2.)
k = np.sqrt( -1j*2.*np.pi*f*mu*sig )
kr = k*r
front = moment / (4.*pi * r**3.) * np.exp(-1j*kr)
mid = -kr**2. + 3.*1j*kr + 3.
if orientation.upper() == 'X':
Hx = front*( (dx/r)**2. * mid + (kr**2. - 1j*kr - 1.) )
Hy = front*( (dx*dy/r**2.) * mid )
Hz = front*( (dx*dz/r**2.) * mid )
elif orientation.upper() == 'Y':
Hx = front*( (dy*dx/r**2.) * mid )
Hy = front*( (dy/r)**2. * mid + (kr**2. - 1j*kr - 1.) )
Hz = front*( (dy*dz/r**2.) * mid )
elif orientation.upper() == 'Z':
Hx = front*( (dx*dz/r**2.) * mid )
Hy = front*( (dy*dz/r**2.) * mid )
Hz = front*( (dz/r)**2. * mid + (kr**2. - 1j*kr - 1.) )
Bx = mu*Hx
By = mu*Hy
Bz = mu*Hz
if Bx.ndim is 1:
Bx = Utils.mkvc(Bx,2)
if By.ndim is 1:
By = Utils.mkvc(By,2)
if Bz.ndim is 1:
Bz = Utils.mkvc(Bz,2)
return Bx, By, Bz
def ElectricDipoleWholeSpace(XYZ, srcLoc, sig, f, current=1., length=1., orientation='X', mu=mu_0):
XYZ = Utils.asArray_N_x_Dim(XYZ, 3)
dx = XYZ[:,0]-srcLoc[0]
dy = XYZ[:,1]-srcLoc[1]
dz = XYZ[:,2]-srcLoc[2]
r = np.sqrt( dx**2. + dy**2. + dz**2.)
k = np.sqrt( -1j*2.*np.pi*f*mu*sig )
kr = k*r
front = current * length / (4. * np.pi * sig * r**3) * np.exp(-1j*k*r)
mid = -k**2 * r**2 + 3*1j*k*r + 3
# Ex = front*((dx**2 / r**2)*mid + (k**2 * r**2 -1j*k*r))
# Ey = front*(dx*dy / r**2)*mid
# Ez = front*(dx*dz / r**2)*mid
if orientation.upper() == 'X':
Ex = front*((dx**2 / r**2)*mid + (k**2 * r**2 -1j*k*r-1.))
Ey = front*(dx*dy / r**2)*mid
Ez = front*(dx*dz / r**2)*mid
return Ex, Ey, Ez
elif orientation.upper() == 'Y':
# x--> y, y--> z, z-->x
Ey = front*((dy**2 / r**2)*mid + (k**2 * r**2 -1j*k*r-1.))
Ez = front*(dy*dz / r**2)*mid
Ex = front*(dy*dx / r**2)*mid
return Ex, Ey, Ez
elif orientation.upper() == 'Z':
# x --> z, y --> x, z --> y
Ez = front*((dz**2 / r**2)*mid + (k**2 * r**2 -1j*k*r-1.))
Ex = front*(dz*dx / r**2)*mid
Ey = front*(dz*dy / r**2)*mid
return Ex, Ey, Ez
# return Ey, Ez, Ex
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from SimPEG import Utils, np
from scipy.constants import mu_0, epsilon_0
from simpegEM.Utils.EMUtils import k
def getKc(freq,sigma,a,b,mu=mu_0,eps=epsilon_0):
a = float(a)
b = float(b)
# return 1./(2*np.pi) * np.sqrt(b / a) * np.exp(-1j*k(freq,sigma,mu,eps)*(b-a))
return np.sqrt(b / a) * np.exp(-1j*k(freq,sigma,mu,eps)*(b-a))
def _r2(xyz):
return np.sum(xyz**2,1)
def _getCasingHertzMagDipole(srcloc,obsloc,freq,sigma,a,b,mu=mu_0*np.ones(3),eps=epsilon_0,moment=1.):
Kc1 = getKc(freq,sigma[1],a,b,mu[1],eps)
nobs = obsloc.shape[0]
dxyz = obsloc - np.c_[np.ones(nobs)]*np.r_[srcloc]
r2 = _r2(dxyz[:,:2])
sqrtr2z2 = np.sqrt(r2 + dxyz[:,2]**2)
k2 = k(freq,sigma[2],mu[2],eps)
return Kc1 * moment / (4.*np.pi) *np.exp(-1j*k2*sqrtr2z2) / sqrtr2z2
def _getCasingHertzMagDipoleDeriv_r(srcloc,obsloc,freq,sigma,a,b,mu=mu_0*np.ones(3),eps=epsilon_0,moment=1.):
HertzZ = _getCasingHertzMagDipole(srcloc,obsloc,freq,sigma,a,b,mu,eps,moment)
nobs = obsloc.shape[0]
dxyz = obsloc - np.c_[np.ones(nobs)]*np.r_[srcloc]
r2 = _r2(dxyz[:,:2])
sqrtr2z2 = np.sqrt(r2 + dxyz[:,2]**2)
k2 = k(freq,sigma[2],mu[2],eps)
return -HertzZ * np.sqrt(r2) / sqrtr2z2 * (1j*k2 + 1./ sqrtr2z2)
def _getCasingHertzMagDipoleDeriv_z(srcloc,obsloc,freq,sigma,a,b,mu=mu_0*np.ones(3),eps=epsilon_0,moment=1.):
HertzZ = _getCasingHertzMagDipole(srcloc,obsloc,freq,sigma,a,b,mu,eps,moment)
nobs = obsloc.shape[0]
dxyz = obsloc - np.c_[np.ones(nobs)]*np.r_[srcloc]
r2z2 = _r2(dxyz)
sqrtr2z2 = np.sqrt(r2z2)
k2 = k(freq,sigma[2],mu[2],eps)
return -HertzZ*dxyz[:,2] /sqrtr2z2 * (1j*k2 + 1./sqrtr2z2)
def _getCasingHertzMagDipole2Deriv_z_r(srcloc,obsloc,freq,sigma,a,b,mu=mu_0*np.ones(3),eps=epsilon_0,moment=1.):
HertzZ = _getCasingHertzMagDipole(srcloc,obsloc,freq,sigma,a,b,mu,eps,moment)
dHertzZdr = _getCasingHertzMagDipoleDeriv_r(srcloc,obsloc,freq,sigma,a,b,mu,eps,moment)
nobs = obsloc.shape[0]
dxyz = obsloc - np.c_[np.ones(nobs)]*np.r_[srcloc]
r2 = _r2(dxyz[:,:2])
r = np.sqrt(r2)
z = dxyz[:,2]
sqrtr2z2 = np.sqrt(r2 + z**2)
k2 = k(freq,sigma[2],mu[2],eps)
return dHertzZdr*(-z/sqrtr2z2)*(1j*k2+1./sqrtr2z2) + HertzZ*(z*r/sqrtr2z2**3)*(1j*k2 + 2./sqrtr2z2)
def _getCasingHertzMagDipole2Deriv_z_z(srcloc,obsloc,freq,sigma,a,b,mu=mu_0*np.ones(3),eps=epsilon_0,moment=1.):
HertzZ = _getCasingHertzMagDipole(srcloc,obsloc,freq,sigma,a,b,mu,eps,moment)
dHertzZdz = _getCasingHertzMagDipoleDeriv_z(srcloc,obsloc,freq,sigma,a,b,mu,eps,moment)
nobs = obsloc.shape[0]
dxyz = obsloc - np.c_[np.ones(nobs)]*np.r_[srcloc]
r2 = _r2(dxyz[:,:2])
r = np.sqrt(r2)
z = dxyz[:,2]
sqrtr2z2 = np.sqrt(r2 + z**2)
k2 = k(freq,sigma[2],mu[2],eps)
return (dHertzZdz*z + HertzZ)/sqrtr2z2*(-1j*k2 - 1./sqrtr2z2) + HertzZ*z/sqrtr2z2**3*(1j*k2*z + 2.*z/sqrtr2z2)
def getCasingEphiMagDipole(srcloc,obsloc,freq,sigma,a,b,mu=mu_0*np.ones(3),eps=epsilon_0,moment=1.):
return 1j * omega(freq) * mu * _getCasingHertzMagDipoleDeriv_r(srcloc,obsloc,freq,sigma,a,b,mu,eps,moment)
def getCasingHrMagDipole(srcloc,obsloc,freq,sigma,a,b,mu=mu_0*np.ones(3),eps=epsilon_0,moment=1.):
return _getCasingHertzMagDipole2Deriv_z_r(srcloc,obsloc,freq,sigma,a,b,mu,eps,moment)
def getCasingHzMagDipole(srcloc,obsloc,freq,sigma,a,b,mu=mu_0*np.ones(3),eps=epsilon_0,moment=1.):
d2HertzZdz2 = _getCasingHertzMagDipole2Deriv_z_z(srcloc,obsloc,freq,sigma,a,b,mu,eps,moment)
k2 = k(freq,sigma[2],mu[2],eps)
HertzZ = _getCasingHertzMagDipole(srcloc,obsloc,freq,sigma,a,b,mu,eps,moment)
return d2HertzZdz2 + k2**2 * HertzZ
def getCasingBrMagDipole(srcloc,obsloc,freq,sigma,a,b,mu=mu_0*np.ones(3),eps=epsilon_0,moment=1.):
return mu_0 * getCasingHrMagDipole(srcloc,obsloc,freq,sigma,a,b,mu,eps,moment)
def getCasingBzMagDipole(srcloc,obsloc,freq,sigma,a,b,mu=mu_0*np.ones(3),eps=epsilon_0,moment=1.):
return mu_0 * getCasingHzMagDipole(srcloc,obsloc,freq,sigma,a,b,mu,eps,moment)
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import numpy as np
from scipy.constants import mu_0, pi
from scipy.special import erf
def hzAnalyticDipoleT(r, t, sigma):
theta = np.sqrt((sigma*mu_0)/(4*t))
tr = theta*r
etr = erf(tr)
t1 = (9/(2*tr**2) - 1)*etr
t2 = (1/np.sqrt(pi))*(9/tr + 4*tr)*np.exp(-tr**2)
hz = (t1 - t2)/(4*pi*r**3)
return hz
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from TDEM import hzAnalyticDipoleT
from FDEM import hzAnalyticDipoleF
from FDEMcasing import *