Clean up plot image code. Now shared between plotSlice and plotImage

This commit is contained in:
rowanc1
2014-03-17 09:17:38 -07:00
parent 251660c560
commit e80d3257dc
+202 -215
View File
@@ -14,229 +14,153 @@ class TensorView(object):
def __init__(self):
pass
def plotImage(self, I, imageType='CC', figNum=1,ax=None,direction='z',numbering=True,annotationColor='w',showIt=False,clim=None):
# def components(self):
# plotAll = len(imageType) == 1
# options = {"direction":direction,"numbering":numbering,"annotationColor":annotationColor,"showIt":False}
# fig = plt.figure(figNum)
# # Determine the subplot number: 131, 121
# numPlots = 130 if plotAll else len(imageType)/2*10+100
# pltNum = 1
# fxyz = self.r(I,'F','F','M')
# if plotAll or 'Fx' in imageType:
# ax_x = plt.subplot(numPlots+pltNum)
# self.plotImage(fxyz[0], imageType='Fx', ax=ax_x, **options)
# pltNum +=1
# if plotAll or 'Fy' in imageType:
# ax_y = plt.subplot(numPlots+pltNum)
# self.plotImage(fxyz[1], imageType='Fy', ax=ax_y, **options)
# pltNum +=1
# if plotAll or 'Fz' in imageType:
# ax_z = plt.subplot(numPlots+pltNum)
# self.plotImage(fxyz[2], imageType='Fz', ax=ax_z, **options)
# pltNum +=1
# if showIt: plt.show()
def plotImage(self, v, vType='CC', grid=False, view='real',
ax=None, clim=None, showIt=False,
pcolorOpts={},
streamOpts={'color':'k'},
gridOpts={'color':'k'},
numbering=True, annotationColor='w'
):
"""
Mesh.plotImage(I)
Mesh.plotImage(v)
Plots scalar fields on the given mesh.
Input:
:param numpy.array I: scalar field
:param numpy.array v: vector
Optional Input:
Optional Inputs:
:param str imageType: type of image ('CC','N','F','Fx','Fy','Fz','E','Ex','Ey','Ez') or combinations, e.g. ExEy or FxFz
:param int figNum: number of figure to plot to
:param str vType: type of vector ('CC','N','F','Fx','Fy','Fz','E','Ex','Ey','Ez')
:param matplotlib.axes.Axes ax: axis to plot to
:param str direction: slice dimensions, 3D only ('x', 'y', 'z')
:param bool showIt: call plt.show()
3D Inputs:
:param bool numbering: show numbering of slices, 3D only
:param str annotationColor: color of annotation, e.g. 'w', 'k', 'b'
:param bool showIt: call plt.show()
.. plot::
:include-source:
from SimPEG import Mesh, np
M = Mesh.TensorMesh([20, 20])
I = np.sin(M.gridCC[:,0]*2*np.pi)*np.sin(M.gridCC[:,1]*2*np.pi)
M.plotImage(I, showIt=True)
v = np.sin(M.gridCC[:,0]*2*np.pi)*np.sin(M.gridCC[:,1]*2*np.pi)
M.plotImage(v, showIt=True)
.. plot::
:include-source:
from SimPEG import Mesh, np
M = Mesh.TensorMesh([20,20,20])
I = np.sin(M.gridCC[:,0]*2*np.pi)*np.sin(M.gridCC[:,1]*2*np.pi)*np.sin(M.gridCC[:,2]*2*np.pi)
M.plotImage(I, annotationColor='k', showIt=True)
v = np.sin(M.gridCC[:,0]*2*np.pi)*np.sin(M.gridCC[:,1]*2*np.pi)*np.sin(M.gridCC[:,2]*2*np.pi)
M.plotImage(v, annotationColor='k', showIt=True)
"""
assert type(I) == np.ndarray, "I must be a numpy array"
assert type(numbering) == bool, "numbering must be a bool"
assert direction in ["x", "y","z"], "direction must be either x,y, or z"
if imageType == 'CC':
assert I.size == self.nC, "Incorrect dimensions for CC."
elif imageType == 'N':
assert I.size == self.nN, "Incorrect dimensions for N."
elif imageType == 'Fx':
if I.size != np.prod(self.vnFx): I, fy, fz = self.r(I,'F','F','M')
elif imageType == 'Fy':
if I.size != np.prod(self.vnFy): fx, I, fz = self.r(I,'F','F','M')
elif imageType == 'Fz':
if I.size != np.prod(self.vnFz): fx, fy, I = self.r(I,'F','F','M')
elif imageType == 'Ex':
if I.size != np.prod(self.vnEx): I, ey, ez = self.r(I,'E','E','M')
elif imageType == 'Ey':
if I.size != np.prod(self.vnEy): ex, I, ez = self.r(I,'E','E','M')
elif imageType == 'Ez':
if I.size != np.prod(self.vnEz): ex, ey, I = self.r(I,'E','E','M')
elif imageType[0] == 'E':
plotAll = len(imageType) == 1
options = {"direction":direction,"numbering":numbering,"annotationColor":annotationColor,"showIt":False}
fig = plt.figure(figNum)
# Determine the subplot number: 131, 121
numPlots = 130 if plotAll else len(imageType)/2*10+100
pltNum = 1
ex, ey, ez = self.r(I,'E','E','M')
if plotAll or 'Ex' in imageType:
ax_x = plt.subplot(numPlots+pltNum)
self.plotImage(ex, imageType='Ex', ax=ax_x, **options)
pltNum +=1
if plotAll or 'Ey' in imageType:
ax_y = plt.subplot(numPlots+pltNum)
self.plotImage(ey, imageType='Ey', ax=ax_y, **options)
pltNum +=1
if plotAll or 'Ez' in imageType:
ax_z = plt.subplot(numPlots+pltNum)
self.plotImage(ez, imageType='Ez', ax=ax_z, **options)
pltNum +=1
if showIt: plt.show()
return
elif imageType[0] == 'F':
plotAll = len(imageType) == 1
options = {"direction":direction,"numbering":numbering,"annotationColor":annotationColor,"showIt":False}
fig = plt.figure(figNum)
# Determine the subplot number: 131, 121
numPlots = 130 if plotAll else len(imageType)/2*10+100
pltNum = 1
fxyz = self.r(I,'F','F','M')
if plotAll or 'Fx' in imageType:
ax_x = plt.subplot(numPlots+pltNum)
self.plotImage(fxyz[0], imageType='Fx', ax=ax_x, **options)
pltNum +=1
if plotAll or 'Fy' in imageType:
ax_y = plt.subplot(numPlots+pltNum)
self.plotImage(fxyz[1], imageType='Fy', ax=ax_y, **options)
pltNum +=1
if plotAll or 'Fz' in imageType:
ax_z = plt.subplot(numPlots+pltNum)
self.plotImage(fxyz[2], imageType='Fz', ax=ax_z, **options)
pltNum +=1
if showIt: plt.show()
return
else:
raise Exception("imageType must be 'CC', 'N','Fx','Fy','Fz','Ex','Ey','Ez'")
if ax is None:
fig = plt.figure(figNum)
fig.clf()
fig = plt.figure()
ax = plt.subplot(111)
else:
assert isinstance(ax,matplotlib.axes.Axes), "ax must be an Axes!"
fig = ax.figure
if self.dim == 1:
if imageType == 'CC':
ph = ax.plot(self.vectorCCx, I, '-ro')
elif imageType == 'N':
ph = ax.plot(self.vectorNx, I, '-bs')
if vType == 'CC':
ph = ax.plot(self.vectorCCx, v, '-ro')
elif vType == 'N':
ph = ax.plot(self.vectorNx, v, '-bs')
ax.set_xlabel("x")
ax.axis('tight')
elif self.dim == 2:
if imageType == 'CC':
C = I[:].reshape(self.vnC, order='F')
elif imageType == 'N':
C = I[:].reshape(self.vnN, order='F')
C = 0.25*(C[:-1, :-1] + C[1:, :-1] + C[:-1, 1:] + C[1:, 1:])
elif imageType == 'Fx':
C = I[:].reshape(self.vnFx, order='F')
C = 0.5*(C[:-1, :] + C[1:, :] )
elif imageType == 'Fy':
C = I[:].reshape(self.vnFy, order='F')
C = 0.5*(C[:, :-1] + C[:, 1:] )
elif imageType == 'Ex':
C = I[:].reshape(self.vnEx, order='F')
C = 0.5*(C[:,:-1] + C[:,1:] )
elif imageType == 'Ey':
C = I[:].reshape(self.vnEy, order='F')
C = 0.5*(C[:-1,:] + C[1:,:] )
return self._plotImage2D(v, vType=vType, grid=grid, view=view,
ax=ax, clim=clim, showIt=showIt,
pcolorOpts=pcolorOpts, streamOpts=streamOpts,
gridOpts=gridOpts)
elif self.dim == 3:
# get copy of image and average to cell-centers is necessary
if vType == 'CC':
vc = v.reshape(self.vnC, order='F')
elif vType == 'N':
vc = (self.aveN2CC*v).reshape(self.vnC, order='F')
elif vType in ['Fx', 'Fy', 'Fz', 'Ex', 'Ey', 'Ez']:
aveOp = 'ave' + vType[0] + '2CCV'
v = getattr(self,aveOp)*v # average to cell centers
ind_xyz = {'x':0,'y':1,'z':2}[vType[1]]
vc = self.r(v.reshape((self.nC,-1),order='F'), 'CC','CC','M')[ind_xyz]
# determine number oE slices in x and y dimension
nX = np.ceil(np.sqrt(self.nCz))
nY = np.ceil(self.nCz/nX)
# allocate space for montage
nCx = self.nCx
nCy = self.nCy
C = np.zeros((nX*nCx,nY*nCy))
for iy in range(int(nY)):
for ix in range(int(nX)):
iz = ix + iy*nX
if iz < self.nCz:
C[ix*nCx:(ix+1)*nCx, iy*nCy:(iy+1)*nCy] = vc[:, :, iz]
else:
C[ix*nCx:(ix+1)*nCx, iy*nCy:(iy+1)*nCy] = np.nan
C = np.ma.masked_where(np.isnan(C), C)
xx = np.r_[0, np.cumsum(np.kron(np.ones((nX, 1)), self.hx).ravel())]
yy = np.r_[0, np.cumsum(np.kron(np.ones((nY, 1)), self.hy).ravel())]
# Plot the mesh
if clim is None:
clim = [C.min(),C.max()]
ph = ax.pcolormesh(self.vectorNx, self.vectorNy, C.T, vmin=clim[0], vmax=clim[1])
ph = ax.pcolormesh(xx, yy, C.T, vmin=clim[0], vmax=clim[1])
# Plot the lines
gx = np.arange(nX+1)*(self.vectorNx[-1]-self.x0[0])
gy = np.arange(nY+1)*(self.vectorNy[-1]-self.x0[1])
# Repeat and seperate with NaN
gxX = np.c_[gx, gx, gx+np.nan].ravel()
gxY = np.kron(np.ones((nX+1, 1)), np.array([0, sum(self.hy)*nY, np.nan])).ravel()
gyX = np.kron(np.ones((nY+1, 1)), np.array([0, sum(self.hx)*nX, np.nan])).ravel()
gyY = np.c_[gy, gy, gy+np.nan].ravel()
ax.plot(gxX, gxY, annotationColor+'-', linewidth=2)
ax.plot(gyX, gyY, annotationColor+'-', linewidth=2)
ax.axis('tight')
ax.set_xlabel("x")
ax.set_ylabel("y")
elif self.dim == 3:
if direction == 'z':
# get copy of image and average to cell-centres is necessary
if imageType == 'CC':
Ic = I[:].reshape(self.vnC, order='F')
elif imageType == 'N':
Ic = I[:].reshape(self.vnN, order='F')
Ic = .125*(Ic[:-1,:-1,:-1]+Ic[1:,:-1,:-1] + Ic[:-1,1:,:-1]+ Ic[1:,1:,:-1]+ Ic[:-1,:-1,1:]+Ic[1:,:-1,1:] + Ic[:-1,1:,1:]+ Ic[1:,1:,1:] )
elif imageType == 'Fx':
Ic = I[:].reshape(self.vnFx, order='F')
Ic = .5*(Ic[:-1,:,:]+Ic[1:,:,:])
elif imageType == 'Fy':
Ic = I[:].reshape(self.vnFy, order='F')
Ic = .5*(Ic[:,:-1,:]+Ic[:,1:,:])
elif imageType == 'Fz':
Ic = I[:].reshape(self.vnFz, order='F')
Ic = .5*(Ic[:,:,:-1]+Ic[:,:,1:])
elif imageType == 'Ex':
Ic = I[:].reshape(self.vnEx, order='F')
Ic = .25*(Ic[:,:-1,:-1]+Ic[:,1:,:-1]+Ic[:,:-1,1:]+Ic[:,1:,:1])
elif imageType == 'Ey':
Ic = I[:].reshape(self.vnEy, order='F')
Ic = .25*(Ic[:-1,:,:-1]+Ic[1:,:,:-1]+Ic[:-1,:,1:]+Ic[1:,:,:1])
elif imageType == 'Ez':
Ic = I[:].reshape(self.vnEz, order='F')
Ic = .25*(Ic[:-1,:-1,:]+Ic[1:,:-1,:]+Ic[:-1,1:,:]+Ic[1:,:1,:])
# determine number oE slices in x and y dimension
nX = np.ceil(np.sqrt(self.nCz))
nY = np.ceil(self.nCz/nX)
# allocate space for montage
nCx = self.nCx
nCy = self.nCy
C = np.zeros((nX*nCx,nY*nCy))
if numbering:
pad = np.sum(self.hx)*0.04
for iy in range(int(nY)):
for ix in range(int(nX)):
iz = ix + iy*nX
if iz < self.nCz:
C[ix*nCx:(ix+1)*nCx, iy*nCy:(iy+1)*nCy] = Ic[:, :, iz]
else:
C[ix*nCx:(ix+1)*nCx, iy*nCy:(iy+1)*nCy] = np.nan
ax.text((ix+1)*(self.vectorNx[-1]-self.x0[0])-pad,(iy)*(self.vectorNy[-1]-self.x0[1])+pad,
'#%i'%iz,color=annotationColor,verticalalignment='bottom',horizontalalignment='right',size='x-large')
C = np.ma.masked_where(np.isnan(C), C)
xx = np.r_[0, np.cumsum(np.kron(np.ones((nX, 1)), self.hx).ravel())]
yy = np.r_[0, np.cumsum(np.kron(np.ones((nY, 1)), self.hy).ravel())]
# Plot the mesh
if clim is None:
clim = [C.min(),C.max()]
ph = ax.pcolormesh(xx, yy, C.T, vmin=clim[0], vmax=clim[1])
# Plot the lines
gx = np.arange(nX+1)*(self.vectorNx[-1]-self.x0[0])
gy = np.arange(nY+1)*(self.vectorNy[-1]-self.x0[1])
# Repeat and seperate with NaN
gxX = np.c_[gx, gx, gx+np.nan].ravel()
gxY = np.kron(np.ones((nX+1, 1)), np.array([0, sum(self.hy)*nY, np.nan])).ravel()
gyX = np.kron(np.ones((nY+1, 1)), np.array([0, sum(self.hx)*nX, np.nan])).ravel()
gyY = np.c_[gy, gy, gy+np.nan].ravel()
ax.plot(gxX, gxY, annotationColor+'-', linewidth=2)
ax.plot(gyX, gyY, annotationColor+'-', linewidth=2)
ax.axis('tight')
if numbering:
pad = np.sum(self.hx)*0.04
for iy in range(int(nY)):
for ix in range(int(nX)):
iz = ix + iy*nX
if iz < self.nCz:
ax.text((ix+1)*(self.vectorNx[-1]-self.x0[0])-pad,(iy)*(self.vectorNy[-1]-self.x0[1])+pad,
'#%i'%iz,color=annotationColor,verticalalignment='bottom',horizontalalignment='right',size='x-large')
ax.set_title(imageType)
ax.set_title(vType)
if showIt: plt.show()
return ph
@@ -270,7 +194,7 @@ class TensorView(object):
# Some user error checking
assert vType in vTypeOpts, "vType must be in ['%s']" % "','".join(vTypeOpts)
assert self.dim == 3, 'Must be a 3D mesh.'
assert self.dim == 3, 'Must be a 3D mesh. Use plotImage.'
assert view in viewOpts, "view must be in ['%s']" % "','".join(viewOpts)
assert normal in normalOpts, "normal must be in ['%s']" % "','".join(normalOpts)
assert type(grid) is bool, 'grid must be a boolean'
@@ -291,19 +215,18 @@ class TensorView(object):
if vType == 'CC':
return getIndSlice(self.r(v,'CC','CC','M'))
elif vType == 'CCv':
v = self.r(v.reshape((self.nC,3),order='F'),'CC','CC','M')
assert view == 'vec', 'Other types for CCv not yet supported'
assert view == 'vec', 'Other types for CCv not supported'
else:
# Now just deal with 'F' and 'E'
aveOp = 'ave' + vType + ('2CCV' if view == 'vec' else '2CC')
v = getattr(self,aveOp)*v # average to cell centers (might be a vector)
v = self.r(v.reshape((self.nC,-1),order='F'),'CC','CC','M')
v = self.r(v.reshape((self.nC,-1),order='F'),'CC','CC','M')
if view == 'vec':
outSlice = []
if 'X' not in normal: outSlice.append(getIndSlice(v[0]))
if 'Y' not in normal: outSlice.append(getIndSlice(v[1]))
if 'Z' not in normal: outSlice.append(getIndSlice(v[2]))
return outSlice
return np.r_[mkvc(outSlice[0]), mkvc(outSlice[1])]
else:
return getIndSlice(self.r(v,'CC','CC','M'))
@@ -319,70 +242,111 @@ class TensorView(object):
h2d.append(self.hz)
x2d.append(self.x0[2])
tM = self.__class__(h2d, x2d) #: Temp Mesh
v2d = doSlice(v)
if ax is None:
fig = plt.figure(1)
fig.clf()
fig = plt.figure()
ax = plt.subplot(111)
else:
assert isinstance(ax, matplotlib.axes.Axes), "ax must be an matplotlib.axes.Axes"
fig = ax.figure
tM._plotImage2D(v2d, vType=('CCv' if view == 'vec' else 'CC'), grid=grid, view=view,
ax=ax, clim=clim, showIt=showIt,
pcolorOpts=pcolorOpts, streamOpts=streamOpts,
gridOpts=gridOpts)
ax.set_xlabel('y' if normal == 'X' else 'x')
ax.set_ylabel('y' if normal == 'Z' else 'z')
ax.set_title('Slice %d' % ind)
def _plotImage2D(self, v, vType='CC', grid=False, view='real',
ax=None, clim=None, showIt=False,
pcolorOpts={},
streamOpts={'color':'k'},
gridOpts={'color':'k'}
):
vTypeOptsCC = ['N','CC','Fx','Fy','Ex','Ey']
vTypeOptsV = ['CCv','F','E']
vTypeOpts = vTypeOptsCC + vTypeOptsV
if view == 'vec':
assert vType in vTypeOptsV, "vType must be in ['%s'] when view='vec'" % "','".join(vTypeOptsV)
assert vType in vTypeOpts, "vType must be in ['%s']" % "','".join(vTypeOpts)
viewOpts = ['real','imag','abs','vec']
assert view in viewOpts, "view must be in ['%s']" % "','".join(viewOpts)
if ax is None:
fig = plt.figure()
ax = plt.subplot(111)
else:
assert isinstance(ax, matplotlib.axes.Axes), "ax must be an matplotlib.axes.Axes"
fig = ax.figure
# Reshape to a cell centered variable
if vType == 'CC':
pass
elif vType == 'CCv':
assert view == 'vec', 'Other types for CCv not supported'
elif vType in ['F', 'E', 'N']:
aveOp = 'ave' + vType + ('2CCV' if view == 'vec' else '2CC')
v = getattr(self,aveOp)*v # average to cell centers (might be a vector)
elif vType in ['Fx','Fy','Ex','Ey']:
aveOp = 'ave' + vType[0] + '2CCV'
v = getattr(self,aveOp)*v # average to cell centers (might be a vector)
xORy = {'x':0,'y':1}[vType[1]]
v = v.reshape((self.nC,-1), order='F')[:,xORy]
out = ()
if view in ['real','imag','abs']:
v = self.r(v, 'CC', 'CC', 'M')
v = getattr(np,view)(v) # e.g. np.real(v)
v = doSlice(v)
if clim is None:
clim = [v.min(),v.max()]
out += (ax.pcolormesh(tM.vectorNx, tM.vectorNy, v.T, vmin=clim[0], vmax=clim[1], **pcolorOpts),)
out += (ax.pcolormesh(self.vectorNx, self.vectorNy, v.T, vmin=clim[0], vmax=clim[1], **pcolorOpts),)
elif view in ['vec']:
U, V = doSlice(v)
U, V = self.r(v.reshape((self.nC,-1), order='F'), 'CC', 'CC', 'M')
if clim is None:
uv = np.r_[mkvc(U), mkvc(V)]
uv = np.sqrt(uv**2)
uv = np.sqrt(U**2 + V**2)
clim = [uv.min(),uv.max()]
# Matplotlib seems to not support irregular
# spaced vectors at the moment. So we will
# Interpolate down to a regular mesh at the
# smallest mesh size in this 2D slice.
nxi = int(tM.hx.sum()/tM.hx.min())
nyi = int(tM.hy.sum()/tM.hy.min())
tMi = self.__class__([np.ones(nxi)*tM.hx.sum()/nxi,
np.ones(nyi)*tM.hy.sum()/nyi], x2d)
P = tM.getInterpolationMat(tMi.gridCC,'CC',zerosOutside=True)
nxi = int(self.hx.sum()/self.hx.min())
nyi = int(self.hy.sum()/self.hy.min())
tMi = self.__class__([np.ones(nxi)*self.hx.sum()/nxi,
np.ones(nyi)*self.hy.sum()/nyi], self.x0)
P = self.getInterpolationMat(tMi.gridCC,'CC',zerosOutside=True)
Ui = tMi.r(P*mkvc(U), 'CC', 'CC', 'M')
Vi = tMi.r(P*mkvc(V), 'CC', 'CC', 'M')
# End Interpolation
out += (ax.pcolormesh(tM.vectorNx, tM.vectorNy, np.sqrt(U**2+V**2).T, vmin=clim[0], vmax=clim[1], **pcolorOpts),)
out += (ax.pcolormesh(self.vectorNx, self.vectorNy, np.sqrt(U**2+V**2).T, vmin=clim[0], vmax=clim[1], **pcolorOpts),)
out += (ax.streamplot(tMi.vectorCCx, tMi.vectorCCy, Ui.T, Vi.T, **streamOpts),)
if grid:
xXGrid = np.c_[tM.vectorNx,tM.vectorNx,np.nan*np.ones(tM.nNx)].flatten()
xYGrid = np.c_[tM.vectorNy[0]*np.ones(tM.nNx),tM.vectorNy[-1]*np.ones(tM.nNx),np.nan*np.ones(tM.nNx)].flatten()
yXGrid = np.c_[tM.vectorNx[0]*np.ones(tM.nNy),tM.vectorNx[-1]*np.ones(tM.nNy),np.nan*np.ones(tM.nNy)].flatten()
yYGrid = np.c_[tM.vectorNy,tM.vectorNy,np.nan*np.ones(tM.nNy)].flatten()
xXGrid = np.c_[self.vectorNx,self.vectorNx,np.nan*np.ones(self.nNx)].flatten()
xYGrid = np.c_[self.vectorNy[0]*np.ones(self.nNx),self.vectorNy[-1]*np.ones(self.nNx),np.nan*np.ones(self.nNx)].flatten()
yXGrid = np.c_[self.vectorNx[0]*np.ones(self.nNy),self.vectorNx[-1]*np.ones(self.nNy),np.nan*np.ones(self.nNy)].flatten()
yYGrid = np.c_[self.vectorNy,self.vectorNy,np.nan*np.ones(self.nNy)].flatten()
out += (ax.plot(np.r_[xXGrid,yXGrid],np.r_[xYGrid,yYGrid],**gridOpts)[0],)
ax.set_xlabel('y' if normal == 'X' else 'x')
ax.set_ylabel('y' if normal == 'Z' else 'z')
ax.set_title('Slice %d' % ind)
ax.set_xlim(*tM.vectorNx[[0,-1]])
ax.set_ylim(*tM.vectorNy[[0,-1]])
ax.set_xlabel('x')
ax.set_ylabel('y')
ax.set_xlim(*self.vectorNx[[0,-1]])
ax.set_ylim(*self.vectorNy[[0,-1]])
if showIt: plt.show()
return out
# def _plotImage2D(self, v, vType='CC',
# normal='Z', ind=None, grid=False, view='real',
# ax=None, clim=None, showIt=False,
# pcolorOpts={},
# streamOpts={'color':'k'},
# gridOpts={'color':'k'}
# ):
def plotGrid(self, ax=None, nodes=False, faces=False, centers=False, edges=False, lines=True, showIt=False):
"""Plot the nodal, cell-centered and staggered grids for 1,2 and 3 dimensions.
@@ -416,7 +380,12 @@ class TensorView(object):
"""
axOpts = {'projection':'3d'} if self.dim == 3 else {}
if ax is None: ax = plt.subplot(111, **axOpts)
if ax is None:
fig = plt.figure()
ax = plt.subplot(111, **axOpts)
else:
assert isinstance(ax, matplotlib.axes.Axes), "ax must be an matplotlib.axes.Axes"
fig = ax.figure
if self.dim == 1:
if nodes:
@@ -557,6 +526,24 @@ if __name__ == '__main__':
q = Utils.mkvc(q)
A = M.faceDiv*M.cellGrad
b = Solver(A).solve(q)
M.plotSlice(M.cellGrad*b, 'F', view='vec', grid=True, showIt=True, pcolorOpts={'alpha':0.8})
M.plotSlice(M.cellGrad*b, 'F', view='vec', grid=True, pcolorOpts={'alpha':0.8})
M2 = Mesh.TensorMesh([10,20],x0=[10,5])
f = np.r_[np.sin(M2.gridFx[:,0]*2*np.pi), np.sin(M2.gridFy[:,1]*2*np.pi)]
M2.plotImage(f, 'F', view='vec', grid=True, pcolorOpts={'alpha':0.8})
M2.plotImage(f, 'Fx')
Mesh.TensorMesh([10]).plotGrid(showIt=True)
f = np.r_[np.sin(M2.gridEx[:,0]*2*np.pi), np.sin(M2.gridEy[:,1]*2*np.pi)]
M2.plotImage(f, 'E', view='vec', grid=True, pcolorOpts={'alpha':0.8})
c = np.r_[np.sin(M2.gridCC[:,0]*2*np.pi)]
M2.plotImage(c, 'CC', view='real')
from SimPEG import Mesh, np
M = Mesh.TensorMesh([20,20,20])
v = np.sin(M.gridCC[:,0]*2*np.pi)*np.sin(M.gridCC[:,1]*2*np.pi)*np.sin(M.gridCC[:,2]*2*np.pi)
M.plotImage(v, annotationColor='k')
Mesh.TensorMesh([10]).plotGrid()
plt.show()