Files
simpeg/code/getDiffOps.py
T

103 lines
3.0 KiB
Python

from scipy.sparse import linalg
from scipy import sparse
from sputils import *
from utils import *
from numpy import *
from getEdgeTangent import *
from getCellVolume import getCellVolume
from getFaceNormals import getFaceNormals
#============= Face DIV ===========================
def getDivMatrix(X,Y,Z):
n = array(shape(X))-1
n1 = n[0]; n2 = n[1]; n3 = n[2]
n1x,n1y,n1z,n2x,n2y,n2z,n3x,n3y,n3z,area1,area2,area3 = getFaceNormals(X,Y,Z)
area = hstack((hstack((mkvc(area1),mkvc(area2))),mkvc(area3)))
S = sdiag(area)
V = getCellVolume(X,Y,Z)
d1 = ddx(n1)
d2 = ddx(n2)
d3 = ddx(n3)
D1 = kron3(speye(n3),speye(n2),d1)
D2 = kron3(speye(n3),d2,speye(n1))
D3 = kron3(d3,speye(n2),speye(n1))
# divergence on faces
D = appendRight3(D1, D2, D3)
return sdiag(1/V)*D*S
#============= Edge CURL ===========================
def getCurlMatrix(X,Y,Z):
n = array(shape(X))-1
n1 = n[0]; n2 = n[1]; n3 = n[2]
d1 = ddx(n1); d2 = ddx(n2); d3 = ddx(n3)
# derivatives on x-edge variables
D32 = kron3(d3,speye(n2),speye(n1+1))
D23 = kron3(speye(n3),d2,speye(n1+1))
D31 = kron3(d3,speye(n2+1),speye(n1))
D13 = kron3(speye(n3),speye(n2+1),d1)
D21 = kron3(speye(n3+1),d2,speye(n1))
D12 = kron3(speye(n3+1),speye(n2),d1)
O1 = spzeros(shape(D32)[0],shape(D31)[1])
O2 = spzeros(shape(D31)[0],shape(D32)[1])
O3 = spzeros(shape(D21)[0],shape(D13)[1])
CURL = appendBottom3(
appendRight3(O1, -D32, D23),
appendRight3(D31, O2, -D13),
appendRight3(-D21, D12, O3))
# scale for non-uniform mesh
e1x,e1y,e1z,e2x,e2y,e2z,e3x,e3y,e3z,norme1,norme2,norme3 = getEdgeTangent(X,Y,Z)
n1x,n1y,n1z,n2x,n2y,n2z,n3x,n3y,n3z,area1,area2,area3 = getFaceNormals(X,Y,Z)
area = hstack((hstack((mkvc(area1),mkvc(area2))),mkvc(area3)))
S = sdiag(1/area)
lngth = hstack((hstack((mkvc(norme1),mkvc(norme2))),mkvc(norme3)))
L = sdiag(lngth)
return S*(CURL*L)
#============= Nodal Gradients ===========================
def getNodalGradient(X,Y,Z):
n = array(shape(X))-1
n1 = n[0]; n2 = n[1]; n3 = n[2]
D1 = kron3(speye(n3+1),speye(n2+1),ddx(n1))
D2 = kron3(speye(n3+1),ddx(n2),speye(n1+1))
D3 = kron3(ddx(n3),speye(n2+1),speye(n1+1))
# topological gradient
GRAD = appendBottom3(D1,D2,D3)
# scale for non-uniform mesh
e1x,e1y,e1z,e2x,e2y,e2z,e3x,e3y,e3z,norme1,norme2,norme3 = getEdgeTangent(X,Y,Z)
lngth = hstack((hstack((mkvc(norme1),mkvc(norme2))),mkvc(norme3)))
L = sdiag(1/lngth)
return L*GRAD
if __name__ == '__main__':
X,Y,Z = ndgrid(linspace(0,2,3),linspace(0,2,3),linspace(0,2,3))
Z[2,2,2] = 2.5; Z[0,0,0] = -0.5
X[2,2,2] = 2.5; X[0,0,0] = -0.5
sig = ones([2,2,2])
C = getCurlMatrix(X,Y,Z)
G = getNodalGradient(X,Y,Z)
tt = C*G
print(tt)