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Author SHA1 Message Date
William Falcon 085195e09b release v0.3.6.9 2019-08-03 10:25:07 -05:00
William Falcon 10bec87014 fixed import 2019-08-03 10:08:51 -05:00
William Falcon 6bccc38294 set tt version 2019-08-03 10:05:33 -05:00
William Falcon 2076b03a60 back 1 tt version 2019-08-03 09:59:44 -05:00
William Falcon f6799a0da0 updated to latest tt version 2019-08-03 09:17:06 -05:00
William Falcon 1d78b40a00 Merge branch 'master' of https://github.com/williamFalcon/pytorch-lightning 2019-08-03 09:16:25 -05:00
William Falcon c8eb06da2b Update README.md 2019-08-03 07:21:25 -05:00
William Falcon ee1029ed5e Update README.md 2019-08-03 07:16:00 -05:00
William Falcon d8e801594b release v0.3.6.8 2019-08-01 16:19:19 -04:00
William Falcon ef6d5a412c proc 0 only for save hpc. all procs for hpc load 2019-08-01 16:19:04 -04:00
William Falcon 00e851958c release v0.3.6.7 2019-08-01 10:26:53 -04:00
William Falcon a0483eec96 fix broken opt link 2019-08-01 10:21:20 -04:00
William Falcon 5e4728b2a7 only proc 0 can submit a continuation slurm job 2019-08-01 10:15:28 -04:00
William Falcon 93ddf555dd :q
erge branch 'master' of https://github.com/williamFalcon/pytorch-lightning
2019-08-01 10:11:35 -04:00
William Falcon 598e1accb5 updated docs 2019-08-01 10:11:26 -04:00
William Falcon a4a8bae359 Update README.md 2019-08-01 10:02:12 -04:00
William Falcon 7b774beb0c release v0.3.6.6 2019-07-28 12:12:45 -04:00
William Falcon 3ffeba4caa Merge pull request #24 from williamFalcon/keys
Keys
2019-07-28 12:11:49 -04:00
William Falcon 6bb3c0306a updated output of test models 2019-07-28 11:51:32 -04:00
William Falcon d372f9a2e2 updated dict keys 2019-07-28 11:46:26 -04:00
William Falcon f1f7698ce1 updated doc indexes 2019-07-28 10:00:53 -04:00
William Falcon 29cf7a239a release v0.3.6.5 2019-07-28 09:57:09 -04:00
William Falcon de93470c2e updated doc indexes 2019-07-28 09:56:02 -04:00
William Falcon db0d347941 updated doc indexes 2019-07-28 09:54:33 -04:00
William Falcon 36c0fae7da updated doc indexes 2019-07-28 09:51:20 -04:00
William Falcon b88307e927 Merge pull request #23 from williamFalcon/lkhphuc-lr_sched
Lkhphuc lr sched
2019-07-28 09:48:46 -04:00
williamFalcon a3df994d5f allow optimizer fx to return 1 or 2 lists 2019-07-28 06:34:55 -07:00
williamFalcon 638d79a5a6 allow optimizer fx to return 1 or 2 lists 2019-07-28 06:33:58 -07:00
williamFalcon b9e0d841dc fixed lr scheduler tests 2019-07-28 06:21:41 -07:00
williamFalcon 27660b8a96 running tests 2019-07-28 05:57:37 -07:00
williamFalcon e42046446d removed file 2019-07-28 05:42:43 -07:00
williamFalcon 5db28899aa merged 2019-07-28 05:39:25 -07:00
William Falcon 88b383115c updated doc indexes 2019-07-28 08:28:15 -04:00
William Falcon aba8405d1a updated doc indexes 2019-07-28 08:27:09 -04:00
William Falcon d95f1a2a65 updated doc indexes 2019-07-28 08:26:58 -04:00
William Falcon 14dff830a1 updated doc indexes 2019-07-28 08:20:26 -04:00
William Falcon 1205dc8a20 updated doc indexes 2019-07-28 08:19:51 -04:00
William Falcon a6ddf8a671 updated doc indexes 2019-07-28 08:16:55 -04:00
William Falcon e89975d19e updated doc indexes 2019-07-28 08:14:50 -04:00
William Falcon cdb4de3606 updated doc indexes 2019-07-28 08:13:40 -04:00
William Falcon 3f8c219131 updated doc indexes 2019-07-28 08:04:28 -04:00
William Falcon 579f111637 Update hooks.md 2019-07-28 08:02:29 -04:00
William Falcon 5a6ee935f0 updated doc indexes 2019-07-28 07:59:16 -04:00
William Falcon 4f0f1a9b0b added hooks docs 2019-07-28 07:55:26 -04:00
William Falcon 42888bceb7 added hooks docs 2019-07-28 07:51:53 -04:00
William Falcon 62201de70d added hooks docs 2019-07-28 07:50:18 -04:00
William Falcon 9aa41ec98d added tb docs 2019-07-27 18:40:29 -04:00
William Falcon a093d11c40 Merge branch 'master' of https://github.com/williamFalcon/pytorch-lightning 2019-07-27 18:27:50 -04:00
William Falcon 921a3cbabe updated docs 2019-07-27 18:27:38 -04:00
William Falcon a48cccdc68 Update README.md 2019-07-27 14:38:33 -04:00
William Falcon 66188209b5 Update README.md 2019-07-27 14:33:48 -04:00
William Falcon 90b14977a4 Update README.md 2019-07-27 14:31:22 -04:00
William Falcon d6b5f37a7b Update README.md 2019-07-27 14:28:44 -04:00
William Falcon 532604f056 Update README.md 2019-07-27 14:26:08 -04:00
William Falcon b58ca39621 removed old template 2019-07-27 13:59:20 -04:00
William Falcon 3ef6e6a572 removed old template 2019-07-27 13:56:57 -04:00
William Falcon 7dd22f82c6 release v0.3.6.4 2019-07-27 13:42:41 -04:00
William Falcon a3bd66167b Update trainer.py 2019-07-27 13:41:38 -04:00
William Falcon 0ce180f6ec updated docs 2019-07-26 23:23:56 -04:00
William Falcon 8e7d3c6737 added clean slurm save load test 2019-07-26 23:16:03 -04:00
William Falcon 4cacb5a21b release v0.3.6.3 2019-07-26 23:09:49 -04:00
William Falcon 60e60fcd8b added clean slurm save load test 2019-07-26 23:09:27 -04:00
William Falcon cf898a6ecf Merge pull request #22 from williamFalcon/loading
Loading
2019-07-26 23:08:17 -04:00
William Falcon 587c195298 added clean slurm save load test 2019-07-26 23:04:41 -04:00
William Falcon 64586f271d added clean slurm save load test 2019-07-26 23:02:18 -04:00
William Falcon 53b781709e added clean slurm save load test 2019-07-26 22:57:49 -04:00
William Falcon f183ac2a1c added clean slurm save load test 2019-07-26 22:51:33 -04:00
William Falcon 61c82611eb added clean slurm save load test 2019-07-26 22:40:07 -04:00
William Falcon 3224365190 added clean slurm save load test 2019-07-26 22:39:44 -04:00
William Falcon 2a4081e537 added clean slurm save load test 2019-07-26 22:33:31 -04:00
William Falcon 8e3a0443c7 added clean slurm save load test 2019-07-26 22:33:00 -04:00
William Falcon f5a01edfb8 added clean slurm save load test 2019-07-26 22:32:34 -04:00
William Falcon f1de62671d added clean slurm save load test 2019-07-26 22:32:27 -04:00
William Falcon 57edb08bd8 added clean slurm save load test 2019-07-26 22:28:09 -04:00
William Falcon ffa7a0dbab added clean slurm save load test 2019-07-26 22:26:55 -04:00
William Falcon b5419fcd8b added clean slurm save load test 2019-07-26 22:24:01 -04:00
William Falcon c61e13f0ff fixed hpc save, load. cleaned apu 2019-07-26 22:13:41 -04:00
William Falcon a6ae97ac09 fixed hpc save, load. cleaned apu 2019-07-26 22:13:06 -04:00
William Falcon 348223a702 fixed hpc save, load. cleaned apu 2019-07-26 22:09:35 -04:00
William Falcon 64de447545 fixed hpc save, load. cleaned apu 2019-07-26 22:07:02 -04:00
William Falcon 265411572f fixed hpc save, load. cleaned apu 2019-07-26 22:04:27 -04:00
William Falcon 4148c36abd added model save load test 2019-07-26 21:55:01 -04:00
William Falcon 0ee0344820 removed old template 2019-07-26 21:39:53 -04:00
William Falcon a5a80f35ec removed old template 2019-07-26 21:39:28 -04:00
William Falcon 92a1f559b5 remove state_dict 2019-07-26 21:39:01 -04:00
William Falcon aacf1947ea auto state-dict and remove the way the model is loaded during hpc 2019-07-26 21:38:06 -04:00
William Falcon e2c7fa44b7 auto state-dict and remove the way the model is loaded during hpc 2019-07-26 21:37:06 -04:00
William Falcon ff1ed9db7e release v0.3.6.1 2019-07-26 19:11:32 -04:00
William Falcon baf2ccefea Merge pull request #21 from williamFalcon/r
R
2019-07-26 19:10:48 -04:00
William Falcon df37c8418a updated test-tube dep number 2019-07-26 18:57:18 -04:00
William Falcon d6bfb94215 added global rank var name 2019-07-26 18:52:38 -04:00
William Falcon 12f717ad4a added global rank var name 2019-07-26 18:52:02 -04:00
William Falcon c7dab0d785 Update lm_test_module.py 2019-07-26 14:39:04 -04:00
William Falcon 56d41eaa8c Merge pull request #20 from williamFalcon/test2
Test2
2019-07-26 12:47:13 -04:00
William Falcon 84edf35f33 added saving tests to cpu 2019-07-26 12:35:28 -04:00
William Falcon a374a7ea00 added saving tests to cpu 2019-07-26 12:33:35 -04:00
William Falcon fbc1bbd161 added saving tests to cpu 2019-07-26 12:31:26 -04:00
William Falcon 84f03a1335 added saving tests to cpu 2019-07-26 12:29:19 -04:00
William Falcon 1a835969a6 added saving tests to cpu 2019-07-26 12:14:58 -04:00
William Falcon 2ee8f157ce added checkpoint test on cpu 2019-07-26 11:51:25 -04:00
William Falcon 51a5cc36e3 added checkpoint test on cpu 2019-07-26 11:50:02 -04:00
William Falcon 98fcc17135 Update trainer.py 2019-07-26 08:27:14 -04:00
William Falcon 5ba0a8fe4c Update RequiredTrainerInterface.md 2019-07-26 08:24:56 -04:00
William Falcon ba25161dcc Update trainer.py 2019-07-26 08:23:37 -04:00
Phuc Le 7d97e3e6e4 Support any lr_scheduler 2019-07-26 11:03:44 +07:00
William Falcon c4b37d1efe updated readme 2019-07-25 20:13:22 -04:00
William Falcon 0489ed1e89 updated readme 2019-07-25 19:55:22 -04:00
William Falcon 677edc46d8 removed exception crashing from val 2019-07-25 19:49:45 -04:00
William Falcon 7e52f6ea97 cleaned up some if statements 2019-07-25 17:14:33 -04:00
William Falcon 7e728d97e7 removed save model logging 2019-07-25 14:36:22 -04:00
William Falcon 08bf9e16ae updated docs 2019-07-25 12:46:11 -04:00
William Falcon 7166b1acbc updated docs 2019-07-25 12:44:48 -04:00
William Falcon d18f38c0d7 updated docs 2019-07-25 12:40:09 -04:00
William Falcon f844f110af updated docs 2019-07-25 12:37:59 -04:00
William Falcon 1cbe54f8ba updated docs 2019-07-25 12:35:28 -04:00
William Falcon 79a79fb27d updated examples 2019-07-25 12:33:53 -04:00
William Falcon b1cd5d9d31 updated examples 2019-07-25 12:30:59 -04:00
William Falcon 6bd58de40e updated examples 2019-07-25 12:30:18 -04:00
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@@ -4,17 +4,15 @@
</a>
</p>
<h3 align="center">
Pytorch Lightning
PyTorch Lightning
</h3>
<p align="center">
The Keras for ML researchers using PyTorch. More control. Less boilerplate.
The PyTorch Keras for ML researchers. More control. Less boilerplate.
</p>
<p align="center">
<a href="https://badge.fury.io/py/pytorch-lightning"><img src="https://badge.fury.io/py/pytorch-lightning.svg" alt="PyPI version" height="18"></a>
<a href="https://pepy.tech/project/pytorch-lightning"><img src="https://pepy.tech/badge/pytorch-lightning" alt="PyPI version" height="18"></a>
</p>
<p align="center">
<a href="https://github.com/williamFalcon/pytorch-lightning/tree/master/tests"><img src="https://github.com/williamFalcon/pytorch-lightning/blob/master/coverage.svg"></a>
<a href="https://travis-ci.org/williamFalcon/pytorch-lightning"><img src="https://travis-ci.org/williamFalcon/pytorch-lightning.svg?branch=master"></a>
<a href="https://williamfalcon.github.io/pytorch-lightning/"><img src="https://readthedocs.org/projects/pytorch-lightning/badge/?version=latest"></a>
@@ -33,28 +31,35 @@ Lightning defers training and validation loop logic to you. It guarantees correc
## Why do I want to use lightning?
When starting a new project the last thing you want to do is recode a training loop, model loading/saving, distributed training, when to validate, etc... You're likely to spend a long time ironing out all the bugs without even getting to the core of your research.
When starting a new project the last thing you want to do is recode a training loop, multi-cluster training, 16-bit precision, early-stopping, model loading/saving, when to validate, etc... You're likely to spend a long time ironing out all the bugs without even getting to the core of your research.
With lightning, you guarantee those parts of your code work so you can focus on what the meat of the research: Data and training, validation loop logic. Don't worry about multiple gpus or speeding up your code, lightning will do that for you!
With lightning, you guarantee those parts of your code work so you can focus on what the meat of the research: The data and the training/validation loop logic.
Don't worry about training on multiple gpus or speeding up your code, lightning will do that for you!
## How do I do use it?
To use lightning do 2 things:
1. [Define a LightningModel](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/)
```python
import pytorch_lightning as ptl
import os
import torch
from torch.nn import functional as F
from torch.utils.data import DataLoader
from torchvision.datasets import MNIST
import torchvision.transforms as transforms
import pytorch_lightning as ptl
class CoolModel(ptl.LightningModule):
def __init(self):
def __init__(self):
super(CoolModel, self).__init__()
# not the best model...
self.l1 = torch.nn.Linear(28 * 28, 10)
def forward(self, x):
return torch.relu(self.l1(x))
return torch.relu(self.l1(x.view(x.size(0), -1)))
def my_loss(self, y_hat, y):
return F.cross_entropy(y_hat, y)
@@ -62,7 +67,7 @@ class CoolModel(ptl.LightningModule):
def training_step(self, batch, batch_nb):
x, y = batch
y_hat = self.forward(x)
return {'tng_loss': self.my_loss(y_hat, y)}
return {'loss': self.my_loss(y_hat, y)}
def validation_step(self, batch, batch_nb):
x, y = batch
@@ -70,23 +75,23 @@ class CoolModel(ptl.LightningModule):
return {'val_loss': self.my_loss(y_hat, y)}
def validation_end(self, outputs):
avg_loss = torch.stack([x for x in outputs['val_loss']]).mean()
return avg_loss
avg_loss = torch.stack([x['val_loss'] for x in outputs]).mean()
return {'avg_val_loss': avg_loss}
def configure_optimizers(self):
return [torch.optim.Adam(self.parameters(), lr=0.02)]
@ptl.data_loader
def tng_dataloader(self):
return DataLoader(MNIST('path/to/save', train=True), batch_size=32)
return DataLoader(MNIST(os.getcwd(), train=True, download=True, transform=transforms.ToTensor()), batch_size=32)
@ptl.data_loader
def val_dataloader(self):
return DataLoader(MNIST('path/to/save', train=False), batch_size=32)
return DataLoader(MNIST(os.getcwd(), train=True, download=True, transform=transforms.ToTensor()), batch_size=32)
@ptl.data_loader
def test_dataloader(self):
return DataLoader(MNIST('path/to/save', train=False), batch_size=32)
return DataLoader(MNIST(os.getcwd(), train=True, download=True, transform=transforms.ToTensor()), batch_size=32)
```
2. Fit with a [trainer](https://williamfalcon.github.io/pytorch-lightning/Trainer/)
@@ -95,15 +100,23 @@ from pytorch_lightning import Trainer
from test_tube import Experiment
model = CoolModel()
exp = Experiment(save_dir=os.getcwd())
# fit on 32 gpus across 4 nodes
exp = Experiment(save_dir='some/dir')
trainer = Trainer(experiment=exp, nb_gpu_nodes=4, gpus=[0,1,2,3,4,5,6,7])
# train on cpu using only 10% of the data (for demo purposes)
trainer = Trainer(experiment=exp, max_nb_epochs=1, train_percent_check=0.1)
# train on 4 gpus
# trainer = Trainer(experiment=exp, max_nb_epochs=1, gpus=[0, 1, 2, 3])
# train on 32 gpus across 4 nodes (make sure to submit appropriate SLURM job)
# trainer = Trainer(experiment=exp, max_nb_epochs=1, gpus=[0, 1, 2, 3, 4, 5, 6, 7], nb_gpu_nodes=4)
# train (1 epoch only here for demo)
trainer.fit(model)
# see all experiment metrics here
# tensorboard --log_dir some/dir
# view tensorflow logs
print(f'View tensorboard logs by running\ntensorboard --logdir {os.getcwd()}')
print('and going to http://localhost:6006 on your browser')
```
@@ -220,7 +233,8 @@ And run tensorboard from that dir
tensorboard --logdir /some/path
```
## Lightning automatically automates all of the following ([each is also configurable](https://williamfalcon.github.io/pytorch-lightning/Trainer/)):
## Lightning automates all of the following ([each is also configurable](https://williamfalcon.github.io/pytorch-lightning/Trainer/)):
###### Checkpointing
@@ -254,9 +268,9 @@ tensorboard --logdir /some/path
###### Experiment Logging
- [Display metrics in progress bar](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#display-metrics-in-progress-bar)
- Log arbitrary metrics
- [Log metric row every k batches](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#log-metric-row-every-k-batches)
- [Process position](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#process-position)
- [Tensorboard support](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#tensorboard-support)
- [Save a snapshot of all hyperparameters](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#save-a-snapshot-of-all-hyperparameters)
- [Snapshot code for a training run](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#snapshot-code-for-a-training-run)
- [Write logs file to csv every k batches](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#write-logs-file-to-csv-every-k-batches)
@@ -264,22 +278,25 @@ tensorboard --logdir /some/path
###### Training loop
- [Accumulate gradients](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#accumulated-gradients)
- [Anneal Learning rate](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#anneal-learning-rate)
- [Force training for min or max epochs](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#force-training-for-min-or-max-epochs)
- [Force disable early stop](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#force-disable-early-stop)
- [Gradient Clipping](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#gradient-clipping)
- [Use multiple optimizers (like GANs)](https://williamfalcon.github.io/pytorch-lightning/Pytorch-Lightning/LightningModule/#configure_optimizers)
- [Hooks](https://williamfalcon.github.io/pytorch-lightning/Trainer/hooks/)
- [Learning rate scheduling](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#configure_optimizers)
- [Use multiple optimizers (like GANs)](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#configure_optimizers)
- [Set how much of the training set to check (1-100%)](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#set-how-much-of-the-training-set-to-check)
###### Validation loop
- [Check validation every n epochs](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#check-validation-every-n-epochs)
- [Hooks](https://williamfalcon.github.io/pytorch-lightning/Trainer/hooks/)
- [Set how much of the validation set to check](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-how-much-of-the-validation-set-to-check)
- [Set how much of the test set to check](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-how-much-of-the-test-set-to-check)
- [Set validation check frequency within 1 training epoch](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-validation-check-frequency-within-1-training-epoch)
- [Set the number of validation sanity steps](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-the-number-of-validation-sanity-steps)
## Demo
```bash
# install lightning
@@ -287,19 +304,35 @@ pip install pytorch-lightning
# clone lightning for the demo
git clone https://github.com/williamFalcon/pytorch-lightning.git
cd examples/new_project_templates/
cd pytorch_lightning/examples/new_project_templates/
# run demo (on cpu)
python trainer_gpu_cluster_template.py
# all of the following demos use the SAME model to show no modification needs to be made to your code
# train on cpu
python single_cpu_template.py
# train on multiple-gpus
python single_gpu_node_template.py --gpus "0,1"
# train on 32 gpus on a cluster (run on a SLURM managed cluster)
python multi_node_cluster_template.py --nb_gpu_nodes 4 --gpus '0,1,2,3,4,5,6,7'
```
Without changing the model AT ALL, you can run the model on a single gpu, over multiple gpus, or over multiple nodes.
## Contributing
Welcome to the PTL community! We're building the most advanced research platform on the planet to implement the latest, best practices that the amazing PyTorch team rolls out!
#### Bug fixes:
1. Submit a github issue.
2. Fix it.
3. Submit a PR!
#### New Features:
1. Submit a github issue.
2. We'll agree on the feature scope.
3. Submit a PR! (with updated docs and tests 🙃).
## Bleeding edge
If you can't wait for the next release, install the most up to date code with:
```bash
# run a grid search on two gpus
python fully_featured_trainer.py --gpus "0;1"
# run single model on multiple gpus
python fully_featured_trainer.py --gpus "0;1" --interactive
pip install git+https://github.com/williamFalcon/pytorch-lightning.git@master --upgrade
```
@@ -3,7 +3,7 @@
A lightning module is a strict superclass of nn.Module, it provides a standard interface for the trainer to interact with the model.
The easiest thing to do is copy [this template](../../pytorch_lightning/examples/new_project_templates/lightning_module_template.py) and modify accordingly.
The easiest thing to do is copy the [minimal example](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#minimal-example) below and modify accordingly.
Otherwise, to Define a Lightning Module, implement the following methods:
@@ -14,8 +14,6 @@ Otherwise, to Define a Lightning Module, implement the following methods:
- [validation_end](RequiredTrainerInterface.md#validation_end)
- [configure_optimizers](RequiredTrainerInterface.md#configure_optimizers)
- [get_save_dict](RequiredTrainerInterface.md#get_save_dict)
- [load_model_specific](RequiredTrainerInterface.md#load_model_specific)
- [tng_dataloader](RequiredTrainerInterface.md#tng_dataloader)
- [tng_dataloader](RequiredTrainerInterface.md#tng_dataloader)
@@ -23,27 +21,32 @@ Otherwise, to Define a Lightning Module, implement the following methods:
**Optional**:
- [on_save_checkpoint](RequiredTrainerInterface.md#on_save_checkpoint)
- [on_load_checkpoint](RequiredTrainerInterface.md#on_load_checkpoint)
- [update_tng_log_metrics](RequiredTrainerInterface.md#update_tng_log_metrics)
- [add_model_specific_args](RequiredTrainerInterface.md#add_model_specific_args)
---
**Minimal example**
### Minimal example
```python
import pytorch_lightning as ptl
import os
import torch
from torch.nn import functional as F
from torch.utils.data import DataLoader
from torchvision.datasets import MNIST
import torchvision.transforms as transforms
import pytorch_lightning as ptl
class CoolModel(ptl.LightningModule):
def __init(self):
def __init__(self):
super(CoolModel, self).__init__()
# not the best model...
self.l1 = torch.nn.Linear(28 * 28, 10)
def forward(self, x):
return torch.relu(self.l1(x))
return torch.relu(self.l1(x.view(x.size(0), -1)))
def my_loss(self, y_hat, y):
return F.cross_entropy(y_hat, y)
@@ -51,7 +54,7 @@ class CoolModel(ptl.LightningModule):
def training_step(self, batch, batch_nb):
x, y = batch
y_hat = self.forward(x)
return {'tng_loss': self.my_loss(y_hat, y)}
return {'loss': self.my_loss(y_hat, y)}
def validation_step(self, batch, batch_nb):
x, y = batch
@@ -59,23 +62,23 @@ class CoolModel(ptl.LightningModule):
return {'val_loss': self.my_loss(y_hat, y)}
def validation_end(self, outputs):
avg_loss = torch.stack([x for x in outputs['val_loss']]).mean()
return avg_loss
avg_loss = torch.stack([x['val_loss'] for x in outputs]).mean()
return {'avg_val_loss': avg_loss}
def configure_optimizers(self):
return [torch.optim.Adam(self.parameters(), lr=0.02)]
@ptl.data_loader
def tng_dataloader(self):
return DataLoader(MNIST('path/to/save', train=True), batch_size=32)
return DataLoader(MNIST(os.getcwd(), train=True, download=True, transform=transforms.ToTensor()), batch_size=32)
@ptl.data_loader
def val_dataloader(self):
return DataLoader(MNIST('path/to/save', train=False), batch_size=32)
return DataLoader(MNIST(os.getcwd(), train=True, download=True, transform=transforms.ToTensor()), batch_size=32)
@ptl.data_loader
def test_dataloader(self):
return DataLoader(MNIST('path/to/save', train=False), batch_size=32)
return DataLoader(MNIST(os.getcwd(), train=True, download=True, transform=transforms.ToTensor()), batch_size=32)
```
---
@@ -222,57 +225,59 @@ def validation_end(self, outputs):
def configure_optimizers(self)
```
Set up as many optimizers as you need. Normally you'd need one. But in the case of GANs or something more esoteric you might have multiple.
Lightning will call .backward() and .step() on each one. If you use 16 bit precision it will also handle that.
Set up as many optimizers and (optionally) learning rate schedulers as you need. Normally you'd need one. But in the case of GANs or something more esoteric you might have multiple.
Lightning will call .backward() and .step() on each one in every epoch. If you use 16 bit precision it will also handle that.
##### Return
List - List of optimizers
List or Tuple - List of optimizers with an optional second list of learning-rate schedulers
**Example**
``` {.python}
# most cases
def configure_optimizers(self):
opt = Adam(lr=0.01)
opt = Adam(self.parameters(), lr=0.01)
return [opt]
# gan example
# gan example, with scheduler for discriminator
def configure_optimizers(self):
generator_opt = Adam(lr=0.01)
disriminator_opt = Adam(lr=0.02)
return [generator_opt, disriminator_opt]
generator_opt = Adam(self.model_gen.parameters(), lr=0.01)
disriminator_opt = Adam(self.model_disc.parameters(), lr=0.02)
discriminator_sched = CosineAnnealing(discriminator_opt, T_max=10)
return [generator_opt, disriminator_opt], [discriminator_sched]
```
---
### get_save_dict
### on_save_checkpoint
``` {.python}
def get_save_dict(self)
def on_save_checkpoint(self, checkpoint)
```
Called by lightning to checkpoint your model. Lightning saves current epoch, current batch nb, etc...
All you have to return is what specifically about your lightning model you want to checkpoint.
Called by lightning to checkpoint your model. Lightning saves the training state (current epoch, global_step, etc)
and also saves the model state_dict. If you want to save anything else, use this method to add your own
key-value pair.
##### Return
Dictionary - No required keys. Most of the time as described in this example.
Nothing
**Example**
``` {.python}
def get_save_dict(self):
# 99% of use cases this is all you need to return
checkpoint = {'state_dict': self.state_dict()}
return checkpoint
def on_save_checkpoint(self, checkpoint):
# 99% of use cases you don't need to implement this method
checkpoint['something_cool_i_want_to_save'] = my_cool_pickable_object
```
---
### load_model_specific
### on_load_checkpoint
``` {.python}
def load_model_specific(self, checkpoint)
def on_load_checkpoint(self, checkpoint)
```
Called by lightning to restore your model. This is your chance to restore your model using the keys you added in get_save_dict.
Lightning will automatically restore current epoch, batch nb, etc.
Called by lightning to restore your model. Lighting auto-restores global step, epoch, etc...
It also restores the model state_dict.
If you saved something with **on_save_checkpoint** this is your chance to restore this.
##### Return
Nothing
@@ -280,9 +285,9 @@ Nothing
**Example**
``` {.python}
def load_model_specific(self, checkpoint):
# you defined 'state_dict' in get_save_dict()
self.load_state_dict(checkpoint['state_dict'])
def on_load_checkpoint(self, checkpoint):
# 99% of the time you don't need to implement this method
self.something_cool_i_want_to_save = checkpoint['something_cool_i_want_to_save']
```
---
@@ -295,7 +300,7 @@ def tng_dataloader(self)
Called by lightning during training loop. Make sure to use the @ptl.data_loader decorator, this ensures not calling this function until the data are needed.
##### Return
Pytorch DataLoader
PyTorch DataLoader
**Example**
@@ -322,7 +327,7 @@ def tng_dataloader(self)
Called by lightning during validation loop. Make sure to use the @ptl.data_loader decorator, this ensures not calling this function until the data are needed.
##### Return
Pytorch DataLoader
PyTorch DataLoader
**Example**
@@ -350,7 +355,7 @@ def test_dataloader(self)
Called by lightning during test loop. Make sure to use the @ptl.data_loader decorator, this ensures not calling this function until the data are needed.
##### Return
Pytorch DataLoader
PyTorch DataLoader
**Example**
@@ -427,4 +432,4 @@ def add_model_specific_args(parent_parser, root_dir):
parser.opt_list('--batch_size', default=256, type=int, options=[32, 64, 128, 256], tunable=False)
parser.opt_list('--optimizer_name', default='adam', type=str, options=['adam'], tunable=False)
return parser
```
```
+3 -2
View File
@@ -21,7 +21,8 @@ pretrained_model = MyLightningModule.load_from_metrics(
map_location=None
)
# predict
# predict
pretrained_model.eval()
pretrained_model.freeze()
y_hat = pretrained_model(x)
```
@@ -30,7 +31,7 @@ y_hat = pretrained_model(x)
| Param | description |
|---|---|
| weights_path | Path to a pytorch checkpoint |
| weights_path | Path to a PyTorch checkpoint |
| tags_csv | Path to meta_tags.csv file generated by the test-tube Experiment |
| on_gpu | if True, puts model on GPU. Make sure to use transforms option if model devices have changed |
| map_location | A dictionary mapping saved weight GPU devices to new GPU devices |
+10 -11
View File
@@ -23,6 +23,16 @@ have configuration issues depending on your cluster.
For a deeper understanding of what lightning is doing, feel free to read [this guide](https://medium.com/@_willfalcon/9-tips-for-training-lightning-fast-neural-networks-in-pytorch-8e63a502f565).
---
#### CUDA flags
CUDA flags make certain GPUs visible to your script.
Lightning sets these for you automatically, there's NO NEED to do this yourself.
```python
# lightning will set according to what you give the trainer
# os.environ["CUDA_DEVICE_ORDER"] = "PCI_BUS_ID"
# os.environ["CUDA_VISIBLE_DEVICES"] = "0"
```
---
#### 16-bit mixed precision
16 bit precision can cut your memory footprint by half. If using volta architecture GPUs it can give a dramatic training speed-up as well.
@@ -43,10 +53,6 @@ trainer = Trainer(amp_level='O2', use_amp=False)
#### Single-gpu
Make sure you're on a GPU machine.
```python
# set these flags
os.environ["CUDA_DEVICE_ORDER"] = "PCI_BUS_ID"
os.environ["CUDA_VISIBLE_DEVICES"] = "0"
# DEFAULT
trainer = Trainer(gpus=[0])
```
@@ -56,13 +62,6 @@ trainer = Trainer(gpus=[0])
Make sure you're on a GPU machine. You can set as many GPUs as you want.
In this setting, the model will run on all 8 GPUs at once using DataParallel under the hood.
```python
# set these flags
# lightning sets these flags for you automatically
# no need to set yourself
# os.environ["CUDA_DEVICE_ORDER"] = "PCI_BUS_ID"
# os.environ["CUDA_VISIBLE_DEVICES"] = "0,1,2,3,4,5,6,7"
# to use DataParallel (default)
trainer = Trainer(gpus=[0,1,2,3,4,5,6,7], distributed_backend='dp')
+27
View File
@@ -50,6 +50,33 @@ exp = Experiment(create_git_tag=True)
Trainer(experiment=exp)
```
---
### Tensorboard support
The experiment object is a strict subclass of PyTorch SummaryWriter. However, this class
also snapshots every detail about the experiment (data folder paths, code, hyperparams),
and allows you to visualize it using tensorboard.
``` {.python}
from test_tube import Experiment, HyperOptArgumentParser
# exp hyperparams
args = HyperOptArgumentParser()
hparams = args.parse_args()
# this is a summaryWriter with nicer logging structure
exp = Experiment(save_dir='/some/path', create_git_tag=True)
# track experiment details (must be ArgumentParser or HyperOptArgumentParser).
# each option in the parser is tracked
exp.argparse(hparams)
exp.tag({'description': 'running demo'})
# trainer uses the exp object to log exp data
trainer = Trainer(experiment=exp)
trainer.fit(model)
# view logs at:
# tensorboard --logdir /some/path
```
---
#### Write logs file to csv every k batches
+1 -12
View File
@@ -1,4 +1,4 @@
The lightning training loop handles everything except the actual computations of your model. To decide what will happen in your training loop, define the [training_step function](../../Pytorch-lightning/LightningModule/#training_step).
The lightning training loop handles everything except the actual computations of your model. To decide what will happen in your training loop, define the [training_step function](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#training_step).
Below are all the things lightning automates for you in the training loop.
@@ -11,17 +11,6 @@ Accumulated gradients runs K small batches of size N before doing a backwards pa
trainer = Trainer(accumulate_grad_batches=1)
```
---
#### Anneal Learning rate
Cut the learning rate by 10 at every epoch listed in this list.
``` {.python}
# DEFAULT (don't anneal)
trainer = Trainer(lr_scheduler_milestones=None)
# cut LR by 10 at 100, 200, and 300 epochs
trainer = Trainer(lr_scheduler_milestones='100, 200, 300')
```
---
#### Force training for min or max epochs
It can be useful to force training for a minimum number of epochs or limit to a max number
+1 -1
View File
@@ -1,4 +1,4 @@
The lightning validation loop handles everything except the actual computations of your model. To decide what will happen in your validation loop, define the [validation_step function](../../Pytorch-lightning/LightningModule/#validation_step).
The lightning validation loop handles everything except the actual computations of your model. To decide what will happen in your validation loop, define the [validation_step function](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#validation_step).
Below are all the things lightning automates for you in the validation loop.
**Note**
+86
View File
@@ -0,0 +1,86 @@
# Hooks
[[Github Code](https://github.com/williamFalcon/pytorch-lightning/blob/master/pytorch_lightning/root_module/hooks.py)]
There are cases when you might want to do something different at different parts of the training/validation loop.
To enable a hook, simply override the method in your LightningModule and the trainer will call it at the correct time.
**Contributing** If there's a hook you'd like to add, simply:
1. Fork PyTorchLightning.
2. Add the hook [here](https://github.com/williamFalcon/pytorch-lightning/blob/master/pytorch_lightning/root_module/hooks.py).
3. Add the correct place in the [Trainer](https://github.com/williamFalcon/pytorch-lightning/blob/master/pytorch_lightning/models/trainer.py) where it should be called.
---
#### on_epoch_start
Called in the training loop at the very beginning of the epoch.
```python
def on_epoch_start(self):
# do something when the epoch starts
```
---
#### on_batch_end
Called in the training loop at the very end of the epoch.
```python
def on_epoch_end(self):
# do something when the epoch ends
```
---
#### on_batch_start
Called in the training loop before anything happens for that batch.
```python
def on_batch_start(self):
# do something when the batch starts
```
---
#### on_pre_performance_check
Called at the very beginning of the validation loop.
```python
def on_pre_performance_check(self):
# do something before validation starts
```
---
#### on_post_performance_check
Called at the very end of the validation loop.
```python
def on_post_performance_check(self):
# do something before validation end
```
---
#### on_tng_metrics
Called in the training loop, right before metrics are logged.
Although you can log at any time by using self.experiment, you can use
this callback to modify what will be logged.
```python
def on_tng_metrics(self, metrics):
# do something before validation end
```
---
#### on_before_zero_grad
Called in the training loop after taking an optimizer step and before zeroing grads.
Good place to inspect weight information with weights updated.
Called once per optimizer
```python
def on_before_zero_grad(self, optimizer):
# do something with the optimizer or inspect it.
```
---
#### on_after_backward
Called in the training loop after model.backward()
This is the ideal place to inspect or log gradient information
```python
def on_after_backward(self):
# example to inspect gradient information in tensorboard
if self.trainer.global_step % 25 == 0: # don't make the tf file huge
params = self.state_dict()
for k, v in params.items():
grads = v
name = k
self.experiment.add_histogram(tag=name, values=grads, global_step=self.trainer.global_step)
```
+10 -7
View File
@@ -49,25 +49,28 @@ But of course the fun is in all the advanced things it can do:
**Experiment Logging**
- [Display metrics in progress bar](Logging/#display-metrics-in-progress-bar)
- Log arbitrary metrics
- [Log metric row every k batches](Logging/#log-metric-row-every-k-batches)
- [Process position](Logging/#process-position)
- [Tensorboard support](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#tensorboard-support)
- [Save a snapshot of all hyperparameters](Logging/#save-a-snapshot-of-all-hyperparameters)
- [Snapshot code for a training run](Logging/#snapshot-code-for-a-training-run)
- [Write logs file to csv every k batches](Logging/#write-logs-file-to-csv-every-k-batches)
**Training loop**
- [Accumulate gradients](Training%20Loop/#accumulated-gradients)
- [Anneal Learning rate](Training%20Loop/#anneal-learning-rate)
- [Force training for min or max epochs](Training%20Loop/#force-training-for-min-or-max-epochs)
- [Force disable early stop](Training%20Loop/#force-disable-early-stop)
- [Use multiple optimizers (like GANs)](../Pytorch-lightning/LightningModule/#configure_optimizers)
- [Set how much of the training set to check (1-100%)](Training%20Loop/#set-how-much-of-the-training-set-to-check)
- [Accumulate gradients](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#accumulated-gradients)
- [Force training for min or max epochs](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#force-training-for-min-or-max-epochs)
- [Force disable early stop](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#force-disable-early-stop)
- [Gradient Clipping](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#gradient-clipping)
- [Hooks](hooks)
- [Learning rate scheduling](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#configure_optimizers)
- [Use multiple optimizers (like GANs)](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#configure_optimizers)
- [Set how much of the training set to check (1-100%)](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#set-how-much-of-the-training-set-to-check)
**Validation loop**
- [Check validation every n epochs](Validation%20Loop/#check-validation-every-n-epochs)
- [Hooks](hooks)
- [Set how much of the validation set to check](Validation%20Loop/#set-how-much-of-the-validation-set-to-check)
- [Set how much of the test set to check](Validation%20Loop/#set-how-much-of-the-test-set-to-check)
- [Set validation check frequency within 1 training epoch](Validation%20Loop/#set-validation-check-frequency-within-1-training-epoch)
+18 -9
View File
@@ -1,10 +1,17 @@
###### New project Quick Start
To start a new project define these two files.
To start a new project you define two files, a LightningModule and a Trainer file.
1. [Define a LightningModule](/LightningModule/RequiredTrainerInterface/)
2. Pick a trainer
- [Basic CPU Trainer](https://github.com/williamFalcon/pytorch-lightning/blob/master/pytorch_lightning/examples/new_project_templates/single_cpu_template.py)
- [GPU cluster Trainer](https://github.com/williamFalcon/pytorch-lightning/blob/master/pytorch_lightning/examples/new_project_templates/multi_node_cluster_template.py)
A separate trainer file allows to run many LightningModules. Each LightningModule has the core
logic to a particular research project.
For example, one lightningModule could be an image classifier, the other
one could be a seq-2-seq model, both (optionally) ran by the same trainer file.
1. [MNIST LightningModule](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#minimal-example)
2. [Trainer](https://williamfalcon.github.io/pytorch-lightning/Trainer/)
- [Basic CPU Trainer Template](https://github.com/williamFalcon/pytorch-lightning/blob/master/pytorch_lightning/examples/new_project_templates/single_cpu_template.py)
- [Multi-GPU Trainer Template](https://github.com/williamFalcon/pytorch-lightning/blob/master/pytorch_lightning/examples/new_project_templates/single_gpu_node_template.py)
- [GPU cluster Trainer Template](https://github.com/williamFalcon/pytorch-lightning/blob/master/pytorch_lightning/examples/new_project_templates/multi_node_cluster_template.py)
###### Docs shortcuts
- [LightningModule](LightningModule/RequiredTrainerInterface/)
@@ -49,9 +56,9 @@ To start a new project define these two files.
###### Experiment Logging
- [Display metrics in progress bar](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#display-metrics-in-progress-bar)
- Log arbitrary metrics
- [Log metric row every k batches](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#log-metric-row-every-k-batches)
- [Process position](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#process-position)
- [Tensorboard support](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#tensorboard-support)
- [Save a snapshot of all hyperparameters](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#save-a-snapshot-of-all-hyperparameters)
- [Snapshot code for a training run](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#snapshot-code-for-a-training-run)
- [Write logs file to csv every k batches](https://williamfalcon.github.io/pytorch-lightning/Trainer/Logging/#write-logs-file-to-csv-every-k-batches)
@@ -59,16 +66,18 @@ To start a new project define these two files.
###### Training loop
- [Accumulate gradients](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#accumulated-gradients)
- [Anneal Learning rate](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#anneal-learning-rate)
- [Force training for min or max epochs](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#force-training-for-min-or-max-epochs)
- [Force disable early stop](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#force-disable-early-stop)
- [Gradient Clipping](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#gradient-clipping)
- [Use multiple optimizers (like GANs)](https://williamfalcon.github.io/pytorch-lightning/Pytorch-Lightning/LightningModule/#configure_optimizers)
- [Hooks](https://williamfalcon.github.io/pytorch-lightning/Trainer/hooks/)
- [Learning rate scheduling](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#configure_optimizers)
- [Use multiple optimizers (like GANs)](https://williamfalcon.github.io/pytorch-lightning/LightningModule/RequiredTrainerInterface/#configure_optimizers)
- [Set how much of the training set to check (1-100%)](https://williamfalcon.github.io/pytorch-lightning/Trainer/Training%20Loop/#set-how-much-of-the-training-set-to-check)
######Validation loop
###### Validation loop
- [Check validation every n epochs](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#check-validation-every-n-epochs)
- [Hooks](https://williamfalcon.github.io/pytorch-lightning/Trainer/hooks/)
- [Set how much of the validation set to check](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-how-much-of-the-validation-set-to-check)
- [Set how much of the test set to check](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-how-much-of-the-test-set-to-check)
- [Set validation check frequency within 1 training epoch](https://williamfalcon.github.io/pytorch-lightning/Trainer/Validation%20loop/#set-validation-check-frequency-within-1-training-epoch)
+2 -2
View File
@@ -1,10 +1,10 @@
site_name: Pytorch lightning Documentation
site_name: PyTorch lightning Documentation
theme:
name: 'material'
docs_dir: docs
repo_url: https://github.com/williamFalcon/pytorch-lightning
site_dir: 'site'
site_description: 'Documentation for Pytorch LightningModule, the researcher version of keras.'
site_description: 'Documentation for PyTorch LightningModule, the researcher version of keras.'
dev_addr: '0.0.0.0:8000'
#google_analytics: ['UA-aasd', 'sitename']
+1 -1
View File
@@ -1,3 +1,3 @@
from .models import Trainer
from .models.trainer import Trainer
from .root_module.root_module import LightningModule
from .root_module.decorators import data_loader
@@ -154,17 +154,6 @@ class LightningTemplateModel(LightningModule):
tqdm_dic = {'val_loss': val_loss_mean.item(), 'val_acc': val_acc_mean.item()}
return tqdm_dic
# ---------------------
# MODEL SAVING
# ---------------------
def get_save_dict(self):
checkpoint = {'state_dict': self.state_dict()}
return checkpoint
def load_model_specific(self, checkpoint):
self.load_state_dict(checkpoint['state_dict'])
pass
# ---------------------
# TRAINING SETUP
# ---------------------
@@ -174,7 +163,8 @@ class LightningTemplateModel(LightningModule):
:return: list of optimizers
"""
optimizer = optim.Adam(self.parameters(), lr=self.hparams.learning_rate)
return [optimizer]
scheduler = optim.lr_scheduler.CosineAnnealingLR(optimizer, T_max=10)
return [optimizer], [scheduler]
def __dataloader(self, train):
# init data generators
@@ -231,7 +221,6 @@ class LightningTemplateModel(LightningModule):
# parser.set_defaults(gradient_clip=5.0)
# network params
parser.opt_list('--drop_prob', default=0.2, options=[0.2, 0.5], type=float, tunable=False)
parser.add_argument('--in_features', default=28*28, type=int)
parser.add_argument('--out_features', default=10, type=int)
parser.add_argument('--hidden_dim', default=50000, type=int) # use 500 for CPU, 50000 for GPU to see speed difference
-1
View File
@@ -1 +0,0 @@
from .trainer import Trainer
@@ -1,203 +0,0 @@
import torch.nn as nn
import numpy as np
from pytorch_lightning import LightningModule
from test_tube import HyperOptArgumentParser
from torchvision.datasets import MNIST
import torchvision.transforms as transforms
import torch
import torch.nn.functional as F
class ExampleModel1(LightningModule):
"""
Sample model to show how to define a template
"""
def __init__(self, hparams):
# init superclass
super(ExampleModel1, self).__init__(hparams)
self.batch_size = hparams.batch_size
# build model
self.__build_model()
# ---------------------
# MODEL SETUP
# ---------------------
def __build_model(self):
"""
Layout model
:return:
"""
self.c_d1 = nn.Linear(in_features=self.hparams.in_features, out_features=self.hparams.hidden_dim)
self.c_d1_bn = nn.BatchNorm1d(self.hparams.hidden_dim)
self.c_d1_drop = nn.Dropout(self.hparams.drop_prob)
self.c_d2 = nn.Linear(in_features=self.hparams.hidden_dim, out_features=self.hparams.out_features)
# ---------------------
# TRAINING
# ---------------------
def forward(self, x):
x = self.c_d1(x)
x = F.tanh(x)
x = self.c_d1_bn(x)
x = self.c_d1_drop(x)
x = self.c_d2(x)
logits = F.log_softmax(x, dim=1)
return logits
def loss(self, labels, logits):
nll = F.nll_loss(logits, labels)
return nll
def training_step(self, data_batch):
"""
Called inside the training loop
:param data_batch:
:return:
"""
# forward pass
x, y = data_batch
x = x.view(x.size(0), -1)
y_hat = self.forward(x)
# calculate loss
loss_val = self.loss(y, y_hat)
tqdm_dic = {'jefe': 1}
return loss_val, tqdm_dic
def validation_step(self, data_batch):
"""
Called inside the validation loop
:param data_batch:
:return:
"""
x, y = data_batch
x = x.view(x.size(0), -1)
y_hat = self.forward(x)
loss_val = self.loss(y, y_hat)
# acc
labels_hat = torch.argmax(y_hat, dim=1)
val_acc = torch.sum(y == labels_hat).item() / (len(y) * 1.0)
output = {'y_hat': y_hat, 'val_loss': loss_val.item(), 'val_acc': val_acc}
return output
def validation_end(self, outputs):
"""
Called at the end of validation to aggregate outputs
:param outputs: list of individual outputs of each validation step
:return:
"""
val_loss_mean = 0
accs = []
for output in outputs:
val_loss_mean += output['val_loss']
accs.append(output['val_acc'])
val_loss_mean /= len(outputs)
tqdm_dic = {'val_loss': val_loss_mean, 'val_acc': np.mean(accs)}
return tqdm_dic
def update_tng_log_metrics(self, logs):
return logs
# ---------------------
# MODEL SAVING
# ---------------------
def get_save_dict(self):
checkpoint = {
'state_dict': self.state_dict(),
}
return checkpoint
def load_model_specific(self, checkpoint):
self.load_state_dict(checkpoint['state_dict'])
pass
# ---------------------
# TRAINING SETUP
# ---------------------
def configure_optimizers(self):
"""
return whatever optimizers we want here
:return: list of optimizers
"""
optimizer = self.choose_optimizer(self.hparams.optimizer_name, self.parameters(), {'lr': self.hparams.learning_rate}, 'optimizer')
self.optimizers = [optimizer]
return self.optimizers
def __dataloader(self, train):
# init data generators
transform = transforms.Compose([transforms.ToTensor(), transforms.Normalize((0.5,), (1.0,))])
dataset = MNIST(root=self.hparams.data_root, train=train, transform=transform, download=True)
loader = torch.utils.data.DataLoader(
dataset=dataset,
batch_size=self.hparams.batch_size,
shuffle=True
)
return loader
@data_loader
def tng_dataloader(self):
if self._tng_dataloader is None:
try:
self._tng_dataloader = self.__dataloader(train=True)
except Exception as e:
print(e)
raise e
return self._tng_dataloader
@property
def val_dataloader(self):
if self._val_dataloader is None:
try:
self._val_dataloader = self.__dataloader(train=False)
except Exception as e:
print(e)
raise e
return self._val_dataloader
@property
def test_dataloader(self):
if self._test_dataloader is None:
try:
self._test_dataloader = self.__dataloader(train=False)
except Exception as e:
print(e)
raise e
return self._test_dataloader
@staticmethod
def add_model_specific_args(parent_parser):
parser = HyperOptArgumentParser(strategy=parent_parser.strategy, parents=[parent_parser])
# param overwrites
# parser.set_defaults(gradient_clip=5.0)
# network params
parser.opt_list('--drop_prob', default=0.2, options=[0.2, 0.5], type=float, tunable=False)
parser.add_argument('--in_features', default=28*28)
parser.add_argument('--hidden_dim', default=500)
parser.add_argument('--out_features', default=10)
# data
parser.add_argument('--data_root', default='/Users/williamfalcon/Developer/personal/research_lib/research_proj/datasets/mnist', type=str)
# training params (opt)
parser.opt_list('--learning_rate', default=0.001, type=float, options=[0.0001, 0.0005, 0.001, 0.005],
tunable=False)
parser.opt_list('--batch_size', default=256, type=int, options=[32, 64, 128, 256], tunable=False)
parser.opt_list('--optimizer_name', default='adam', type=str, options=['adam'], tunable=False)
return parser
+41 -43
View File
@@ -10,7 +10,6 @@ import re
import torch
from torch.utils.data.distributed import DistributedSampler
from torch.optim.lr_scheduler import MultiStepLR
import torch.multiprocessing as mp
import torch.distributed as dist
import numpy as np
@@ -24,7 +23,7 @@ from pytorch_lightning.utils.debugging import MisconfigurationException
try:
from apex import amp
APEX_AVAILABLE = True
except ModuleNotFoundError: # pragma: no cover
except Exception:
APEX_AVAILABLE = False
@@ -71,7 +70,6 @@ class Trainer(TrainerIO):
train_percent_check=1.0, val_percent_check=1.0, test_percent_check=1.0,
val_check_interval=0.95,
log_save_interval=100, add_log_row_interval=10,
lr_scheduler_milestones=None,
distributed_backend='dp',
use_amp=False,
print_nan_grads=False,
@@ -104,7 +102,6 @@ class Trainer(TrainerIO):
:param val_check_interval:
:param log_save_interval:
:param add_log_row_interval:
:param lr_scheduler_milestones:
:param distributed_backend: 'np' to use DistributedParallel, 'ddp' to use DistributedDataParallel
:param use_amp:
:param print_nan_grads:
@@ -141,7 +138,6 @@ class Trainer(TrainerIO):
self.early_stop_callback = early_stop_callback
self.min_nb_epochs = min_nb_epochs
self.nb_sanity_val_steps = nb_sanity_val_steps
self.lr_scheduler_milestones = [] if lr_scheduler_milestones is None else [int(x.strip()) for x in lr_scheduler_milestones.split(',')]
self.lr_schedulers = []
self.amp_level = amp_level
self.print_nan_grads = print_nan_grads
@@ -161,7 +157,6 @@ class Trainer(TrainerIO):
self.nb_tng_batches = None
self.nb_test_batches = None
# gpus come in as a string.
# if gpus = -1 then use all available devices
# otherwise, split the string using commas
@@ -443,8 +438,10 @@ class Trainer(TrainerIO):
raise MisconfigurationException('amp + cpu is not supported. Please use a GPU option')
# CHOOSE OPTIMIZER
# filter out the weights that were done on gpu so we can load on good old cpus
# allow for lr schedulers as well
self.optimizers = model.configure_optimizers()
if len(self.optimizers) == 2:
self.optimizers, self.lr_schedulers = self.optimizers
self.__run_pretrain_routine(model)
@@ -455,8 +452,10 @@ class Trainer(TrainerIO):
def __dp_train(self, model):
# CHOOSE OPTIMIZER
# filter out the weights that were done on gpu so we can load on good old cpus
# allow for lr schedulers as well
self.optimizers = model.configure_optimizers()
if len(self.optimizers) == 2:
self.optimizers, self.lr_schedulers = self.optimizers
model.cuda(self.data_parallel_device_ids[0])
@@ -500,14 +499,19 @@ class Trainer(TrainerIO):
self.proc_rank = self.node_rank * len(self.data_parallel_device_ids) + gpu_nb
self.world_size = self.nb_gpu_nodes * len(self.data_parallel_device_ids)
# let the exp know the rank to avoid overwriting logs
self.experiment.rank = self.proc_rank
# set up server using proc 0's ip address
# try to init for 20 times at max in case ports are taken
# where to store ip_table
self.__init_tcp_connection()
# CHOOSE OPTIMIZER
# filter out the weights that were done on gpu so we can load on good old cpus
# allow for lr schedulers as well
self.optimizers = model.configure_optimizers()
if len(self.optimizers) == 2:
self.optimizers, self.lr_schedulers = self.optimizers
# MODEL
# copy model to each gpu
@@ -587,12 +591,6 @@ class Trainer(TrainerIO):
# init training constants
self.__layout_bookeeping()
# add lr schedulers
if self.lr_scheduler_milestones is not None:
for optimizer in self.optimizers:
scheduler = MultiStepLR(optimizer, self.lr_scheduler_milestones)
self.lr_schedulers.append(scheduler)
# print model summary
if self.proc_rank == 0 and self.print_weights_summary:
ref_model.summarize()
@@ -608,22 +606,27 @@ class Trainer(TrainerIO):
if self.proc_rank == 0:
self.experiment.save()
# track model now.
# if cluster resets state, the model will update with the saved weights
self.model = model
# enable cluster checkpointing
# also restores training state
if self.cluster is not None: # pragma: no cover
self.enable_auto_hpc_walltime_manager()
# ---------------------------
# CORE TRAINING LOOP
# ---------------------------
self.model = model
self.__train()
def __train(self):
# run all epochs
for epoch_nb in range(self.current_epoch, self.max_nb_epochs):
# update the lr scheduler
for lr_scheduler in self.lr_schedulers:
lr_scheduler.step()
if self.lr_schedulers is not None:
for lr_scheduler in self.lr_schedulers:
lr_scheduler.step()
model = self.__get_model()
model.current_epoch = epoch_nb
@@ -769,7 +772,7 @@ class Trainer(TrainerIO):
output = self.model.training_step(data_batch, batch_nb)
try:
model_specific_tqdm_metrics_dic = output['tqdm_metrics']
model_specific_tqdm_metrics_dic = output['prog']
except Exception as e:
model_specific_tqdm_metrics_dic = {}
@@ -854,30 +857,25 @@ class Trainer(TrainerIO):
elif not can_check_epoch:
return
try:
# hook
if self.__is_function_implemented('on_pre_performance_check'):
model = self.__get_model()
model.on_pre_performance_check()
# hook
if self.__is_function_implemented('on_pre_performance_check'):
model = self.__get_model()
model.on_pre_performance_check()
# use full val set on end of epoch
# use a small portion otherwise
max_batches = None if not self.fast_dev_run else 1
model_specific_tqdm_metrics_dic = self.validate(
self.model,
self.val_dataloader,
max_batches
)
self.__add_tqdm_metrics(model_specific_tqdm_metrics_dic)
# use full val set on end of epoch
# use a small portion otherwise
max_batches = None if not self.fast_dev_run else 1
model_specific_tqdm_metrics_dic = self.validate(
self.model,
self.val_dataloader,
max_batches
)
self.__add_tqdm_metrics(model_specific_tqdm_metrics_dic)
# hook
if self.__is_function_implemented('on_post_performance_check'):
model = self.__get_model()
model.on_post_performance_check()
except Exception as e:
print(e)
print(traceback.print_exc())
# hook
if self.__is_function_implemented('on_post_performance_check'):
model = self.__get_model()
model.on_post_performance_check()
if self.progress_bar:
# add model specific metrics
@@ -885,6 +883,6 @@ class Trainer(TrainerIO):
self.prog_bar.set_postfix(**tqdm_metrics)
# model checkpointing
if self.proc_rank == 0 and self.checkpoint_callback:
if self.proc_rank == 0 and self.checkpoint_callback is not None:
print('save callback...')
self.checkpoint_callback.on_epoch_end(epoch=self.current_epoch, logs=self.__tng_tqdm_dic)
self.checkpoint_callback.on_epoch_end(epoch=self.current_epoch, logs=self.__tng_tqdm_dic)
+49 -28
View File
@@ -4,34 +4,36 @@ import re
import pdb
from pytorch_lightning.pt_overrides.override_data_parallel import LightningDistributedDataParallel, LightningDataParallel
class ModelIO(object):
def load_model_specific(self, checkpoint):
def on_load_checkpoint(self, checkpoint):
"""
Do something with the checkpoint
Gives model a chance to load something before state_dict is restored
:param checkpoint:
:return:
"""
raise NotImplementedError
pass
def get_save_dict(self):
def on_save_checkpoint(self, checkpoint):
"""
Return specific things for the model
:return:
Give the model a chance to add something to the checkpoint.
state_dict is already there
"""
raise NotImplementedError
pass
# -------------------------
# OPTIONAL HOOKS
# -------------------------
def on_hpc_save(self):
def on_hpc_save(self, checkpoint):
"""
Hook to do whatever you need right before Slurm manager saves the model
:return:
"""
pass
def on_hpc_load(self):
def on_hpc_load(self, checkpoint):
"""
Hook to do whatever you need right before Slurm manager loads the model
:return:
@@ -42,7 +44,6 @@ class ModelIO(object):
class TrainerIO(object):
def __get_model(self):
print(type(self.model))
is_dp_module = type(self.model) is LightningDistributedDataParallel or type(self.model) is LightningDataParallel
model = self.model.module if is_dp_module else self.model
return model
@@ -70,35 +71,47 @@ class TrainerIO(object):
checkpoint['early_stop_callback_wait'] = self.early_stop_callback.wait
checkpoint['early_stop_callback_patience'] = self.early_stop_callback.patience
# save optimizers
optimizer_states = []
for i, optimizer in enumerate(self.optimizers):
optimizer_states.append(optimizer.state_dict())
checkpoint['optimizer_states'] = optimizer_states
# save lr schedulers
lr_schedulers = []
for i, scheduler in enumerate(self.lr_schedulers):
lr_schedulers.append(scheduler.state_dict())
# request what to save from the model
checkpoint['lr_schedulers'] = lr_schedulers
# add the state_dict from the model
model = self.__get_model()
checkpoint_dict = model.get_save_dict()
checkpoint['state_dict'] = model.state_dict()
# give the model a chance to add a few things
model.on_save_checkpoint(checkpoint)
# merge trainer and model saving items
checkpoint.update(checkpoint_dict)
return checkpoint
# --------------------
# HPC IO
# --------------------
def enable_auto_hpc_walltime_manager(self): # pragma: no cover
def enable_auto_hpc_walltime_manager(self):
if self.cluster is None:
return
# allow test tube to handle model check pointing automatically
self.cluster.set_checkpoint_save_function(
self.hpc_save,
kwargs={
'folderpath': self.checkpoint_callback.filepath,
'experiment': self.experiment
}
)
# only if proc 0 so we don't trigger world_size resubmits
if self.proc_rank == 0:
self.cluster.set_checkpoint_save_function(
self.hpc_save,
kwargs={
'folderpath': self.checkpoint_callback.filepath,
'experiment': self.experiment
}
)
self.cluster.set_checkpoint_load_function(
self.hpc_load,
kwargs={
@@ -128,6 +141,11 @@ class TrainerIO(object):
optimizer_states = checkpoint['optimizer_states']
for optimizer, opt_state in zip(self.optimizers, optimizer_states):
optimizer.load_state_dict(opt_state)
# restore the lr schedulers
lr_schedulers = checkpoint['lr_schedulers']
for scheduler, lrs_state in zip(self.lr_schedulers, lr_schedulers):
scheduler.load_state_dict(lrs_state)
# ----------------------------------
# PRIVATE OPS
@@ -150,13 +168,14 @@ class TrainerIO(object):
# give model a chance to do something on hpc_save
model = self.__get_model()
model.on_hpc_save()
checkpoint = self.dump_checkpoint()
# request what to save from the model
checkpoint_dict = self.dump_checkpoint()
model.on_hpc_save(checkpoint)
# do the actual save
torch.save(checkpoint_dict, filepath)
torch.save(checkpoint, filepath)
return filepath
def hpc_load(self, folderpath, on_gpu):
filepath = '{}/hpc_ckpt_{}.ckpt'.format(folderpath, self.max_ckpt_in_folder(folderpath))
@@ -166,15 +185,17 @@ class TrainerIO(object):
else:
checkpoint = torch.load(filepath, map_location=lambda storage, loc: storage)
# load training state
# load training state (affects trainer only)
self.restore_training_state(checkpoint)
# load model state
model = self.__get_model()
model.load_model_specific(checkpoint)
# load the state_dict on the model automatically
model.load_state_dict(checkpoint['state_dict'])
# call model hook
model.on_hpc_load()
model.on_hpc_load(checkpoint)
def max_ckpt_in_folder(self, path):
files = os.listdir(path)
+6 -4
View File
@@ -58,7 +58,7 @@ class LightningModule(GradInformation, ModelIO, ModelHooks):
def configure_optimizers(self):
"""
Return array of optimizers
Return a list of optimizers and a list of schedulers (could be empty)
:return:
"""
raise NotImplementedError
@@ -108,11 +108,13 @@ class LightningModule(GradInformation, ModelIO, ModelHooks):
else:
checkpoint = torch.load(weights_path, map_location=lambda storage, loc: storage)
# load the state_dict on the model automatically
model = cls(hparams)
model.load_state_dict(checkpoint['state_dict'])
# give model a chance to load something
model.on_load_checkpoint(checkpoint)
# allow model to load
model.load_model_specific(checkpoint)
model.load_state_dict(checkpoint['state_dict'], strict=False)
return model
def summarize(self):
@@ -96,12 +96,15 @@ class LightningTestModel(LightningModule):
if self.trainer.use_dp:
loss_val = loss_val.unsqueeze(0)
output = OrderedDict({
'loss': loss_val
})
# can also return just a scalar instead of a dict (return loss_val)
return output
# alternate possible outputs to test
if self.trainer.batch_nb % 1 == 0:
output = OrderedDict({
'loss': loss_val,
'prog': {'some_val': loss_val * loss_val}
})
return output
if self.trainer.batch_nb % 2 == 0:
return loss_val
def validation_step(self, data_batch, batch_i):
"""
@@ -171,17 +174,6 @@ class LightningTestModel(LightningModule):
def on_tng_metrics(self, logs):
logs['some_tensor_to_test'] = torch.rand(1)
# ---------------------
# MODEL SAVING
# ---------------------
def get_save_dict(self):
checkpoint = {'state_dict': self.state_dict()}
return checkpoint
def load_model_specific(self, checkpoint):
self.load_state_dict(checkpoint['state_dict'])
pass
# ---------------------
# TRAINING SETUP
# ---------------------
@@ -190,7 +182,10 @@ class LightningTestModel(LightningModule):
return whatever optimizers we want here
:return: list of optimizers
"""
# try no scheduler for this model (testing purposes)
optimizer = optim.Adam(self.parameters(), lr=self.hparams.learning_rate)
# test returning only 1 list instead of 2
return [optimizer]
def __dataloader(self, train):
-210
View File
@@ -1,210 +0,0 @@
import os
import sys
import torch
import numpy as np
from test_tube import HyperOptArgumentParser, Experiment, SlurmCluster
from pytorch_lightning.models.trainer import Trainer
from pytorch_lightning.utils.arg_parse import add_default_args
from time import sleep
from pytorch_lightning.callbacks.pt_callbacks import EarlyStopping, ModelCheckpoint
SEED = 2334
torch.manual_seed(SEED)
np.random.seed(SEED)
# ---------------------
# DEFINE MODEL HERE
# ---------------------
from pytorch_lightning.models.sample_model_template.model_template import ExampleModel1
# ---------------------
AVAILABLE_MODELS = {
'model_1': ExampleModel1
}
"""
Allows training by using command line arguments
Run by:
# TYPE YOUR RUN COMMAND HERE
"""
def main_local(hparams):
main(hparams, None, None)
def main(hparams, cluster, results_dict):
"""
Main training routine specific for this project
:param hparams:
:return:
"""
on_gpu = torch.cuda.is_available()
if hparams.disable_cuda:
on_gpu = False
device = 'cuda' if on_gpu else 'cpu'
hparams.__setattr__('device', device)
hparams.__setattr__('on_gpu', on_gpu)
hparams.__setattr__('nb_gpus', torch.cuda.device_count())
hparams.__setattr__('inference_mode', hparams.model_load_weights_path is not None)
# init experiment
exp = Experiment(
name=hparams.tt_name,
debug=hparams.debug,
save_dir=hparams.tt_save_path,
version=hparams.hpc_exp_number,
autosave=False,
description=hparams.tt_description
)
exp.argparse(hparams)
exp.save()
# build model
print('loading model...')
model = TRAINING_MODEL(hparams)
print('model built')
# callbacks
early_stop = EarlyStopping(
monitor=hparams.early_stop_metric,
patience=hparams.early_stop_patience,
verbose=True,
mode=hparams.early_stop_mode
)
model_save_path = '{}/{}/{}'.format(hparams.model_save_path, exp.name, exp.version)
checkpoint = ModelCheckpoint(
filepath=model_save_path,
save_function=None,
save_best_only=True,
verbose=True,
monitor=hparams.model_save_monitor_value,
mode=hparams.model_save_monitor_mode
)
# configure trainer
trainer = Trainer(
experiment=exp,
on_gpu=on_gpu,
cluster=cluster,
progress_bar=hparams.enable_tqdm,
overfit_pct=hparams.overfit,
track_grad_norm=hparams.track_grad_norm,
fast_dev_run=hparams.fast_dev_run,
check_val_every_n_epoch=hparams.check_val_every_n_epoch,
accumulate_grad_batches=hparams.accumulate_grad_batches,
process_position=process_position,
current_gpu_name=current_gpu,
checkpoint_callback=checkpoint,
early_stop_callback=early_stop,
enable_early_stop=hparams.enable_early_stop,
max_nb_epochs=hparams.max_nb_epochs,
min_nb_epochs=hparams.min_nb_epochs,
train_percent_check=hparams.train_percent_check,
val_percent_check=hparams.val_percent_check,
test_percent_check=hparams.test_percent_check,
val_check_interval=hparams.val_check_interval,
log_save_interval=hparams.log_save_interval,
add_log_row_interval=hparams.add_log_row_interval,
lr_scheduler_milestones=hparams.lr_scheduler_milestones
)
# train model
trainer.fit(model)
def get_default_parser(strategy, root_dir):
possible_model_names = list(AVAILABLE_MODELS.keys())
parser = HyperOptArgumentParser(strategy=strategy, add_help=False)
add_default_args(parser, root_dir, possible_model_names, SEED)
return parser
def get_model_name(args):
for i, arg in enumerate(args):
if 'model_name' in arg:
return args[i+1]
def optimize_on_cluster(hyperparams):
# enable cluster training
cluster = SlurmCluster(
hyperparam_optimizer=hyperparams,
log_path=hyperparams.tt_save_path,
test_tube_exp_name=hyperparams.tt_name
)
# email for cluster coms
cluster.notify_job_status(email='add_email_here', on_done=True, on_fail=True)
# configure cluster
cluster.per_experiment_nb_gpus = hyperparams.per_experiment_nb_gpus
cluster.job_time = '48:00:00'
cluster.gpu_type = '1080ti'
cluster.memory_mb_per_node = 48000
# any modules for code to run in env
cluster.add_command('source activate pytorch_lightning')
# name of exp
job_display_name = hyperparams.tt_name.split('_')[0]
job_display_name = job_display_name[0:3]
# run hopt
print('submitting jobs...')
cluster.optimize_parallel_cluster_gpu(
main,
nb_trials=hyperparams.nb_hopt_trials,
job_name=job_display_name
)
if __name__ == '__main__':
model_name = get_model_name(sys.argv)
# use default args
root_dir = os.path.split(os.path.dirname(sys.modules['__main__'].__file__))[0]
parent_parser = get_default_parser(strategy='random_search', root_dir=root_dir)
# allow model to overwrite or extend args
TRAINING_MODEL = AVAILABLE_MODELS[model_name]
parser = TRAINING_MODEL.add_model_specific_args(parent_parser)
parser.json_config('-c', '--config', default=root_dir + '/run_configs/local.json')
hyperparams = parser.parse_args()
# format GPU layout
os.environ["CUDA_DEVICE_ORDER"] = "PCI_BUS_ID"
gpu_ids = hyperparams.gpus.split(';')
# RUN TRAINING
if hyperparams.on_cluster:
print('RUNNING ON SLURM CLUSTER')
os.environ["CUDA_VISIBLE_DEVICES"] = ','.join(gpu_ids)
optimize_on_cluster(hyperparams)
elif hyperparams.single_run_gpu:
print(f'RUNNING 1 TRIAL ON GPU. gpu: {gpu_ids[0]}')
os.environ["CUDA_VISIBLE_DEVICES"] = gpu_ids[0]
main(hyperparams, None, None)
elif hyperparams.local or hyperparams.single_run:
os.environ["CUDA_VISIBLE_DEVICES"] = '0'
print('RUNNING LOCALLY')
main(hyperparams, None, None)
else:
print(f'RUNNING MULTI GPU. GPU ids: {gpu_ids}')
hyperparams.optimize_parallel_gpu(
main_local,
gpu_ids=gpu_ids,
nb_trials=hyperparams.nb_hopt_trials,
nb_workers=len(gpu_ids)
)
+2 -2
View File
@@ -7,7 +7,7 @@ from setuptools import setup, find_packages
# http://blog.ionelmc.ro/2014/05/25/python-packaging/
setup(
name="pytorch-lightning",
version='0.3.6',
version='0.3.6.9',
description="The Keras for ML researchers using PyTorch",
author="William Falcon",
author_email="waf2107@columbia.edu",
@@ -19,7 +19,7 @@ setup(
install_requires=[
"torch>=1.1.0",
"tqdm",
"test-tube>=0.6.7.1",
"test-tube>=0.6.7.6",
],
packages=find_packages(),
long_description=open("README.md", encoding="utf-8").read(),
+1 -1
View File
@@ -1,4 +1,4 @@
# Pytorch-Lightning Tests
# PyTorch-Lightning Tests
## Running tests
The automatic travis tests ONLY run CPU-based tests. Although these cover most of the use cases,
+219 -39
View File
@@ -3,16 +3,18 @@ from pytorch_lightning import Trainer
from pytorch_lightning.examples.new_project_templates.lightning_module_template import LightningTemplateModel
from pytorch_lightning.testing_models.lm_test_module import LightningTestModel
from argparse import Namespace
from test_tube import Experiment
from test_tube import Experiment, SlurmCluster
from pytorch_lightning.callbacks import ModelCheckpoint, EarlyStopping
from pytorch_lightning.utils.debugging import MisconfigurationException
from pytorch_lightning.root_module import memory
from pytorch_lightning.models.trainer import reduce_distributed_output
from pytorch_lightning.root_module import model_saving
import numpy as np
import warnings
import torch
import os
import shutil
import pdb
SEED = 2334
torch.manual_seed(SEED)
@@ -22,6 +24,135 @@ np.random.seed(SEED)
# ------------------------------------------------------------------------
# TESTS
# ------------------------------------------------------------------------
def test_amp_gpu_ddp():
"""
Make sure DDP + AMP work
:return:
"""
if not torch.cuda.is_available():
warnings.warn('test_amp_gpu_ddp cannot run. Rerun on a GPU node to run this test')
return
if not torch.cuda.device_count() > 1:
warnings.warn('test_amp_gpu_ddp cannot run. Rerun on a node with 2+ GPUs to run this test')
return
os.environ['MASTER_PORT'] = str(np.random.randint(12000, 19000, 1)[0])
hparams = get_hparams()
model = LightningTestModel(hparams)
trainer_options = dict(
progress_bar=True,
max_nb_epochs=1,
gpus=[0, 1],
distributed_backend='ddp',
use_amp=True
)
run_gpu_model_test(trainer_options, model, hparams)
def test_cpu_slurm_save_load():
"""
Verify model save/load/checkpoint on CPU
:return:
"""
hparams = get_hparams()
model = LightningTestModel(hparams)
save_dir = init_save_dir()
# exp file to get meta
exp = get_exp(False)
exp.argparse(hparams)
exp.save()
cluster_a = SlurmCluster()
trainer_options = dict(
max_nb_epochs=1,
cluster=cluster_a,
experiment=exp,
checkpoint_callback=ModelCheckpoint(save_dir)
)
# fit model
trainer = Trainer(**trainer_options)
result = trainer.fit(model)
real_global_step = trainer.global_step
# traning complete
assert result == 1, 'amp + ddp model failed to complete'
# predict with trained model before saving
# make a prediction
for batch in model.test_dataloader:
break
x, y = batch
x = x.view(x.size(0), -1)
model.eval()
pred_before_saving = model(x)
# test registering a save function
trainer.enable_auto_hpc_walltime_manager()
# test HPC saving
# simulate snapshot on slurm
saved_filepath = trainer.hpc_save(save_dir, exp)
assert os.path.exists(saved_filepath)
# wipe-out trainer and model
# retrain with not much data... this simulates picking training back up after slurm
# we want to see if the weights come back correctly
continue_tng_hparams = get_hparams(continue_training=True, hpc_exp_number=cluster_a.hpc_exp_number)
trainer_options = dict(
max_nb_epochs=1,
cluster=SlurmCluster(continue_tng_hparams),
experiment=exp,
checkpoint_callback=ModelCheckpoint(save_dir),
)
trainer = Trainer(**trainer_options)
model = LightningTestModel(hparams)
# set the epoch start hook so we can predict before the model does the full training
def assert_pred_same():
assert trainer.global_step == real_global_step and trainer.global_step > 0
# predict with loaded model to make sure answers are the same
trainer.model.eval()
new_pred = trainer.model(x)
assert torch.all(torch.eq(pred_before_saving, new_pred)).item() == 1
model.on_epoch_start = assert_pred_same
# by calling fit again, we trigger training, loading weights from the cluster
# and our hook to predict using current model before any more weight updates
trainer.fit(model)
clear_save_dir()
def test_loading_meta_tags():
hparams = get_hparams()
save_dir = init_save_dir()
# save tags
exp = get_exp(False)
exp.tag({'some_str':'a_str', 'an_int': 1, 'a_float': 2.0})
exp.argparse(hparams)
exp.save()
# load tags
tags_path = exp.get_data_path(exp.name, exp.version) + '/meta_tags.csv'
tags = model_saving.load_hparams_from_tags_csv(tags_path)
assert tags.batch_size == 32 and tags.hidden_dim == 1000
clear_save_dir()
def test_dp_output_reduce():
# test identity when we have a single gpu
@@ -43,6 +174,74 @@ def test_dp_output_reduce():
assert reduced['b']['c'] == out['b']['c']
def test_model_saving_loading():
"""
Tests use case where trainer saves the model, and user loads it from tags independently
:return:
"""
hparams = get_hparams()
model = LightningTestModel(hparams)
save_dir = init_save_dir()
# exp file to get meta
exp = get_exp(False)
exp.argparse(hparams)
exp.save()
trainer_options = dict(
max_nb_epochs=1,
cluster=SlurmCluster(),
experiment=exp,
checkpoint_callback=ModelCheckpoint(save_dir)
)
# fit model
trainer = Trainer(**trainer_options)
result = trainer.fit(model)
# traning complete
assert result == 1, 'amp + ddp model failed to complete'
# make a prediction
for batch in model.test_dataloader:
break
x, y = batch
x = x.view(x.size(0), -1)
# generate preds before saving model
model.eval()
pred_before_saving = model(x)
# save model
new_weights_path = os.path.join(save_dir, 'save_test.ckpt')
trainer.save_checkpoint(new_weights_path)
# load new model
tags_path = exp.get_data_path(exp.name, exp.version)
tags_path = os.path.join(tags_path, 'meta_tags.csv')
model_2 = LightningTestModel.load_from_metrics(weights_path=new_weights_path, tags_csv=tags_path, on_gpu=False)
model_2.eval()
# make prediction
# assert that both predictions are the same
new_pred = model_2(x)
assert torch.all(torch.eq(pred_before_saving, new_pred)).item() == 1
clear_save_dir()
def test_model_freeze_unfreeze():
hparams = get_hparams()
model = LightningTestModel(hparams)
model.freeze()
model.unfreeze()
def test_amp_gpu_ddp_slurm_managed():
"""
Make sure DDP + AMP work
@@ -108,7 +307,7 @@ def test_amp_gpu_ddp_slurm_managed():
if trainer.use_ddp:
# on hpc this would work fine... but need to hack it for the purpose of the test
trainer.model = pretrained_model
trainer.optimizers = pretrained_model.configure_optimizers()
trainer.optimizers, trainer.lr_schedulers = pretrained_model.configure_optimizers()
# test HPC loading / saving
trainer.hpc_save(save_dir, exp)
@@ -305,33 +504,6 @@ def test_multi_gpu_model_ddp():
run_gpu_model_test(trainer_options, model, hparams)
def test_amp_gpu_ddp():
"""
Make sure DDP + AMP work
:return:
"""
if not torch.cuda.is_available():
warnings.warn('test_amp_gpu_ddp cannot run. Rerun on a GPU node to run this test')
return
if not torch.cuda.device_count() > 1:
warnings.warn('test_amp_gpu_ddp cannot run. Rerun on a node with 2+ GPUs to run this test')
return
os.environ['MASTER_PORT'] = str(np.random.randint(12000, 19000, 1)[0])
hparams = get_hparams()
model = LightningTestModel(hparams)
trainer_options = dict(
progress_bar=True,
max_nb_epochs=1,
gpus=[0, 1],
distributed_backend='ddp',
use_amp=True
)
run_gpu_model_test(trainer_options, model, hparams)
def test_ddp_sampler_error():
"""
@@ -402,7 +574,7 @@ def run_gpu_model_test(trainer_options, model, hparams, on_gpu=True):
if trainer.use_ddp:
# on hpc this would work fine... but need to hack it for the purpose of the test
trainer.model = pretrained_model
trainer.optimizers = pretrained_model.configure_optimizers()
trainer.optimizers, trainer.lr_schedulers = pretrained_model.configure_optimizers()
# test HPC loading / saving
trainer.hpc_save(save_dir, exp)
@@ -411,16 +583,24 @@ def run_gpu_model_test(trainer_options, model, hparams, on_gpu=True):
clear_save_dir()
def get_hparams():
def get_hparams(continue_training=False, hpc_exp_number=0):
root_dir = os.path.dirname(os.path.realpath(__file__))
hparams = Namespace(**{'drop_prob': 0.2,
'batch_size': 32,
'in_features': 28*28,
'learning_rate': 0.001*8,
'optimizer_name': 'adam',
'data_root': os.path.join(root_dir, 'mnist'),
'out_features': 10,
'hidden_dim': 1000})
args = {
'drop_prob': 0.2,
'batch_size': 32,
'in_features': 28*28,
'learning_rate': 0.001*8,
'optimizer_name': 'adam',
'data_root': os.path.join(root_dir, 'mnist'),
'out_features': 10,
'hidden_dim': 1000}
if continue_training:
args['test_tube_do_checkpoint_load'] = True
args['hpc_exp_number'] = hpc_exp_number
hparams = Namespace(**args)
return hparams