Steven Silvester
0134946fc7
Update multi_image test and install tifffile for travis.
2014-11-07 15:22:18 +02:00
Steven Silvester
e0e4fe26f1
Add tifffile support for MultiImage
2014-11-07 15:22:18 +02:00
Stefan van der Walt
8bba07a7f2
Merge pull request #1171 from jjhelmus/unwrap_phase_3d_bug
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BUG: segmentation fault when unwrapping 3d image
2014-11-07 13:39:18 +02:00
Jonathan Helmus
25653dc288
TST: Unit test to check for 3d unwrap seg fault
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Added a unit test to check for bug in unwrap_phase which causes
a segmentation fault when the middle dimension is connected.
2014-11-06 21:03:14 -06:00
Steven Silvester
2374b6a1ff
Merge pull request #1219 from jni/reconstruct-error
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Raise meaningful error when wrong "method" passed to `reconstruct`
2014-11-05 20:42:35 -06:00
Steven Silvester
66aaf71943
Merge pull request #1217 from jni/morpho-out
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Allow discontiguous out arrays in `skimage.morphology.grey`
2014-11-05 20:35:56 -06:00
Juan Nunez-Iglesias
39d042e4ba
Test correct error for wrong method in reconstruct
2014-11-06 10:29:43 +11:00
Juan Nunez-Iglesias
f52f2c1779
Raise meaningful error in reconstruct w bad method
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If a method other than 'erosion' or 'dilation' was passed, an
`UnboundLocalVariable` error for `pad_value` was raised, which made it
difficult to determine the source of the error. Now, an eloquent
`ValueError` is raised instead.
See #1218 .
2014-11-06 10:27:43 +11:00
Juan Nunez-Iglesias
1a3ec0299c
Add tests for discontiguous out arrays in grey morpho
2014-11-04 15:20:21 +11:00
Juan Nunez-Iglesias
d7fdfebb96
Remove contiguous conversion for out array
2014-11-04 15:08:38 +11:00
Juan Nunez-Iglesias
59a9cfe4eb
Merge pull request #1214 from blink1073/remove-null-plugin
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Remove null_plugin in Favor of the pil_plugin
2014-11-03 01:56:32 +11:00
Steven Silvester
6906dbc957
Use matplotlib as the default imshow
2014-11-02 07:08:43 -06:00
Steven Silvester
dfffd07e4a
Clean up the imports in the pil_plugin
2014-11-02 07:03:15 -06:00
Steven Silvester
91266c5702
Update tests to use default plugins.
2014-11-02 07:03:01 -06:00
Steven Silvester
21d6ef15ec
Remove null plugin since we have the pil plugin as a requirement
2014-11-02 06:28:17 -06:00
Steven Silvester
4eef9c5f75
Merge pull request #1211 from stefanv/bug/setup_dependency_error
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Print correct version when dependency is not satisfied
2014-11-02 06:13:58 -06:00
Steven Silvester
d10ab06102
Merge pull request #1210 from stefanv/doc/io_null_doc
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Update error message for no plugins
2014-11-02 06:13:19 -06:00
Josh Warner
45b3826137
Merge pull request #1213 from blink1073/fix-windows-install
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Use Recommended "extern" Import Method for Cython
2014-10-30 23:07:49 -05:00
Steven Silvester
86fdbf460f
Use recommended extern import method for cython
2014-10-30 20:43:16 -05:00
Stefan van der Walt
92929fc417
Print correct version when dependency is not satisfied
2014-10-29 13:39:42 +02:00
Stefan van der Walt
99818f02eb
Update error message for no plugins
2014-10-29 13:38:40 +02:00
Juan Nunez-Iglesias
f73fc33e0e
Merge pull request #1188 from vighneshbirodkar/rag_merge
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Added in_place option to merge_nodes
2014-10-23 20:48:23 +11:00
Vighnesh Birodkar
b8988190b0
Docstring changes
2014-10-23 13:17:29 +05:30
Stefan van der Walt
dbab977535
Merge pull request #1206 from tonysyu/fix/canny-deprecation
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Fix deprecation of canny function
2014-10-21 13:17:16 +02:00
Tony S Yu
cb1a26ce2e
Fix deprecation of canny function
2014-10-20 22:21:28 -05:00
Stefan van der Walt
f6ef94cb73
Merge pull request #1204 from blink1073/travis-streamline
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Travis-CI streamline
2014-10-20 14:05:33 +02:00
Steven Silvester
79473ee6d9
Quiet down optional installs to avoid hitting 10000 line limit
2014-10-20 06:13:39 -05:00
Steven Silvester
1ae060dce8
Free disk space during travis install
2014-10-20 06:13:00 -05:00
Stefan van der Walt
59e2badb8f
Merge pull request #1199 from blink1073/use-pypi-tifffile
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Use PyPI tifffile or fall back on local version
2014-10-20 12:57:58 +02:00
Steven Silvester
95f4aa70c1
Avoid star import
2014-10-20 05:03:00 -05:00
Stefan van der Walt
8fe238d323
Merge pull request #1202 from jni/badge
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Add Travis and Coveralls badges to README
2014-10-20 10:39:12 +02:00
Vighnesh Birodkar
96bf747197
always return new id and put new id logic in a function
2014-10-18 21:33:42 +05:30
Juan Nunez-Iglesias
4d50466edc
Add Travis and Coveralls badges to README
2014-10-17 20:13:16 +11:00
Steven Silvester
7734cdf7e0
Move tifffile license description
2014-10-16 17:06:12 -05:00
Vighnesh Birodkar
31ecc3db86
Change None to 0
2014-10-17 00:06:12 +05:30
Vighnesh Birodkar
0419c1e6f7
sequential numbering of nodes using max id
2014-10-16 23:22:56 +05:30
Steven Silvester
713452ab9e
Use newer version of tifffile.py.
2014-10-16 05:28:43 -05:00
Steven Silvester
17a3b50a5e
Use tifffile 0.3.2, which passes doctests
2014-10-16 05:05:37 -05:00
Steven Silvester
b5da90e4c7
Just disable doctests in tifffile_local
2014-10-16 04:49:45 -05:00
Steven Silvester
0569524d79
Use proper nose option
2014-10-16 04:14:42 -05:00
Steven Silvester
284cdd0bca
Do not test or cover the external libraries directly
2014-10-16 03:20:09 -05:00
Steven Silvester
a3c8ce32ac
Rename file to a valid module name.
2014-10-15 21:05:23 -05:00
Steven Silvester
88719b3340
Fix path to tifffile.c
2014-10-15 21:00:52 -05:00
Steven Silvester
50aff0058a
Add tifffile.c to the build
2014-10-15 20:59:20 -05:00
Steven Silvester
b6f775a7cf
Use new wheels site and do not install tifffile until optional
2014-10-15 06:03:11 -05:00
Steven Silvester
fbba5e5e01
Remove tifffile as an external dependency
2014-10-15 05:58:54 -05:00
Steven Silvester
dddbc1aa23
Add the __init__.py to make it a package
2014-10-15 05:57:56 -05:00
Steven Silvester
268eb5f2b5
Add tifffile to a new external package.
2014-10-15 05:57:05 -05:00
Steven Silvester
37d6ddfe36
Fix handling of variables - use local
2014-10-12 19:11:32 -05:00
Steven Silvester
0d2799a98d
Export the MPL variables
2014-10-12 18:35:35 -05:00