53d3154f09
Use a strided 1-element array as dummy filter out
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When using generic_filter to build a graph, the numerical filter
output is actually ignored. Building a full array, even of the
smallest dtype, was wasteful. Using stride_tricks solves this by
creating a single-element buffer into which all output is fed.
2015-12-14 18:57:29 +11:00
49aa7cf999
Fix typo in variable name
2015-12-14 18:42:25 +11:00
d5819f664a
Add tests for generic RAG construction
2015-12-14 17:12:11 +11:00
e9c4c87519
Make RAG generic, requiring only label_image
2015-12-14 17:12:11 +11:00
c3d52d602c
Simplify reference to generate_binary_structure
2015-12-14 17:12:11 +11:00
97f3ad1a6b
NetworkX is required so remove optional import
2015-12-14 17:12:11 +11:00
975d1a4cc0
Merge pull request #1792 from scottsievert/fftconvolve
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Uses fftconvolve instead of convolve2d for speedups
2015-12-14 16:37:18 +11:00
477f39634a
Merge pull request #1825 from stefanv/travis_pyamg
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Re-enable pyamg, since release 3.0.2 closes #1788
2015-12-14 16:36:38 +11:00
084ad3c22b
Merge pull request #1821 from jni/integral-image-fixes
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Add deprecation path to skimage.transform.integrate API change
2015-12-13 20:36:16 -08:00
8be859829e
Re-enable pyamg, since release 3.0.2 closes #1788
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This reverts commit a9b4e78934
2015-12-13 19:52:36 -08:00
7aa680ccd1
Merge pull request #1768 from stefanv/mailmap
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Add preliminary mailmap
2015-12-13 22:27:11 -05:00
d99f21806d
Merge pull request #1824 from stefanv/travis_pyamg
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Disable pyamg on Travis until #1788 is closed
2015-12-13 20:14:19 -06:00
b0301a2119
Add preliminary mailmap and tool to generate it
2015-12-13 18:10:28 -08:00
a9b4e78934
Disable pyamg on Travis until #1788 is closed
2015-12-13 17:52:43 -08:00
2892e90abc
removes paren
2015-12-13 16:59:59 -06:00
4d6c9e7b84
now N dimensional, changes constant, cleans and comments
2015-12-13 14:57:52 -06:00
5b8fd77b80
Merge pull request #1691 from juliusbierk/active-contour-model
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New feature: Active contour model
2015-12-13 14:57:10 -06:00
0bc3ad8f79
Restore vectorised integrate deprecated behaviour
2015-12-13 16:25:29 +11:00
3899c571b7
Test individual coordinates for integrate in doctest
2015-12-13 14:55:44 +11:00
c7243e7383
Allow passing individual coordinate tuples to integrate
2015-12-13 14:55:23 +11:00
5df9e0cf70
Update incorrect version number in docstring
2015-12-13 14:54:57 +11:00
74f8ae19f6
Add note in TODO for deprecated use of integrate()
2015-12-13 14:47:01 +11:00
458dc15225
Add deprecation warning for old syntax for integrate()
2015-12-13 14:45:45 +11:00
38b1880ef7
Update docstring comments for integrate function
2015-12-13 14:35:59 +11:00
3fd47091dd
adds comment explaining time_ratio decision
2015-12-12 21:15:01 -06:00
827e4b11c9
Merge pull request #1819 from blink1073/doc-building-docs
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Move the doc build readme to contributing.txt
2015-12-13 13:42:58 +11:00
91d3e81927
Merge pull request #1820 from blink1073/deprecate-2.6
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Start deprecation of python 2.6
2015-12-13 13:40:08 +11:00
683ecde2e1
Start deprecation of python 2.6
2015-12-12 20:27:21 -06:00
9c37e8e515
Move the doc build readme to contributing.txt
2015-12-12 20:09:59 -06:00
3f3b705ebd
fixes import, tuple addition
2015-12-12 19:26:10 -06:00
8b0d5113eb
Merge pull request #1818 from blink1073/improve_downcast
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Add support for casting from 64bit integers and use smart downcast
2015-12-13 10:54:39 +11:00
5eaf2010df
Merge pull request #953 from syedTabish/Issue949
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Update integral image to support nD images
2015-12-13 10:53:09 +11:00
4e00d45f68
Improve warning message
2015-12-12 17:07:36 -06:00
f3965885e8
Fix failing test
2015-12-12 16:42:54 -06:00
be7161d350
Add debug print
2015-12-12 16:20:26 -06:00
a6f4419da4
Update failing tests
2015-12-12 14:20:38 -06:00
f8d19ae7f0
Allow 64bit integer conversions and direct downcast
2015-12-12 13:40:32 -06:00
fb9e9e6f7a
Merge pull request #2 from emmanuelle/active-contour-model
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Avoids crash of active contour example when run with old scipy version
2015-12-12 15:40:51 +00:00
15d09f91b8
Avoids crash of active contour example when run with old scipy version
2015-12-12 16:14:17 +01:00
d8c7160eb2
Merge pull request #1 from emmanuelle/active-contour
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Some minor PEP8 issues
2015-12-12 01:01:04 +00:00
a8b9177ca9
Merge pull request #1812 from blink1073/matplotlib-debug
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Fix matplotlib errors in test suite
2015-12-11 11:48:46 -08:00
2aab4311c1
Remove debug print
2015-12-11 10:52:00 -06:00
4b6db6425e
Fix matplotlib backend
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Add a debug print
Try with qtagg
Try with qt4agg
Comment out failing test for now
2015-12-11 10:49:11 -06:00
a16c530322
Some minor PEP8 issues
2015-12-11 17:21:17 +01:00
1be8336599
adds decision when to use fftconvolve/convolve2d
2015-12-10 19:47:02 -06:00
ba361ea7fc
Merge pull request #1811 from emmanuelle/sphinx
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Update Sphinx requirement
2015-12-10 16:27:13 -08:00
5000449970
Fixed broken sphinx link
2015-12-11 00:44:16 +01:00
1455874c3c
Documented required version of sphinx
2015-12-10 23:36:27 +01:00
966e0fd685
Merge pull request #1770 from stefanv/list_regionprops
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Only iterate over available region properties
2015-12-09 11:21:56 +11:00
1a05b130e8
Merge pull request #1449 from stefanv/clear_border_non_binary
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Allow clear_border to operate on labeled images
2015-12-09 11:18:40 +11:00
Juan Nunez-Iglesias