d8cc148d8c
Replace individual errors by 2D decorator
2015-12-24 19:00:43 +01:00
0359284623
Modified some methods in _RegionProperties class to make them
...
dimension-agnostic. Removed the NotImplementedError for 3-D images in
regionprops function.
2015-12-24 18:56:49 +01:00
e1751f91e2
Some PEP8 in test module
2015-12-24 18:52:57 +01:00
d4b3aeeed3
Merge pull request #1846 from arokem/hull-docs
...
DOC: Small one. The input to this one needs to be 2D.
2015-12-24 10:34:00 +01:00
6740ef9849
Merge pull request #1842 from jni/1840
...
Specify 2D images in denoise bilateral docstring
2015-12-24 09:59:11 +01:00
9fb5f1333d
TST: Test both functions(!).
2015-12-23 15:36:35 -08:00
cc8c3b7687
Merge pull request #1847 from emmanuelle/remove_label_from_morphology
...
Remove deprecated label function from morphology module in preparation for 0.12 release
2015-12-23 15:01:46 -08:00
436d0e8ca3
TST: Test error handling in convex_hull, convex_hull_object.
...
Also, a few PEP8 fixes in both module and tests.
2015-12-23 14:57:44 -08:00
227211fec7
DOC: Small one. The input to this one needs to be 2D.
2015-12-23 14:24:52 -08:00
0b61b8f46f
Removed deprecated label function from morphology module in preparation
...
for 0.12 release.
2015-12-23 23:24:22 +01:00
4509338aac
Merge pull request #1777 from stevendbrown/rp_intensity_check
...
Added label vs. intensity shape checking to regionprops
2015-12-23 22:34:59 +01:00
c5f9fffaad
Merge pull request #1844 from emmanuelle/fix_euler
...
Fix euler
2015-12-23 21:56:46 +01:00
3f5aa73eb4
Update tests to also use reasonable weights for TV denoising
2015-12-23 12:30:12 -05:00
f143f4b39e
Change default weight for denoise_tv_chambolle to a value that is reasonable for float images scaled to the [0, 1] range
2015-12-23 12:29:37 -05:00
d62524f103
Mentioned Euler characteristic (instead of Euler number) in docstring of
...
regionprops.
2015-12-23 16:26:23 +01:00
a56c6071c2
Corrected bug in the computation of the Euler characteristic.
2015-12-23 16:09:13 +01:00
d6105a0fe4
Merge pull request #1782 from pratapvardhan/clncython
...
BUG: Buffer dtype mismatch, expected 'Py_ssize_t' but got 'long'
2015-12-23 15:35:05 +01:00
e102011098
Specify 2D images in denoise bilateral docstring
...
Addresses #1840
2015-12-23 23:57:22 +11:00
ea9ed9ccd9
Merge pull request #1826 from jni/rag-generic
...
Allow construction of simple RAGs from label images
2015-12-22 17:37:02 +01:00
a4d0ac85cc
Merge pull request #1603 from michaelpacer/draw_coords
...
Fixed variable names to accord with r, c naming convention
2015-12-21 12:11:16 -06:00
f0eec46e5c
Merge pull request #1783 from ivoflipse/fix_hog
...
Fixing Cythonized version of HOG
2015-12-19 17:37:24 +01:00
14095de291
Merge pull request #1830 from scottsievert/fftconvolve
...
Clean up richardson-lucy deconvolution function
2015-12-16 14:42:24 +11:00
fb99e3cce6
styles code (no more functions, less lines)
2015-12-15 19:19:14 -06:00
06186710d5
Update outdated docstring of _add_edge_filter
2015-12-16 08:31:30 +11:00
6b908c1bb1
BUG: io: imread in the PIL plugin drops indexed PNG alpha channel.
...
When using the PIL plugin to read an indexed PNG file that has
an alpha channel, the alpha channel would be lost.
2015-12-15 12:30:43 -05:00
74a015d1d4
radon transform: when circle=True, ignore values outside circle without throwing an error ( closes #1808 )
2015-12-14 17:13:29 -08:00
5c03f2aff5
Bug: not all edges found by asymmetric footprint
...
If we have a label image:
[[1, 2],
[3, 4]]
Then the footprint:
[[0, 0, 0],
[0, 1, 1],
[0, 1, 1]]
will not discover the edge (2, 3), even though that edge should be
present when `connectivity=2`.
This commit fixes the bug by using a complete footprint, without the
top/left surfaces zeroed out.
See also:
https://github.com/scikit-image/scikit-image/pull/1826#issuecomment-164597442
2015-12-15 10:56:04 +11:00
4aa08fe353
Simplify cache
2015-12-14 00:42:29 -08:00
bf5ba4540b
Fix doc setting for Python 2.x
2015-12-14 00:42:29 -08:00
024dd34b19
Clean up style and PEP8
2015-12-14 00:42:29 -08:00
5e848f5889
Auto-generate _RegionProps property docstrings
2015-12-14 00:42:29 -08:00
4deeb1f802
Move max_id logic to top of RAG constructor
...
max_id is used during RAG building iteration, resulting in an error if
it is not defined ahead of the generic_filter stage.
2015-12-14 19:06:43 +11:00
53d3154f09
Use a strided 1-element array as dummy filter out
...
When using generic_filter to build a graph, the numerical filter
output is actually ignored. Building a full array, even of the
smallest dtype, was wasteful. Using stride_tricks solves this by
creating a single-element buffer into which all output is fed.
2015-12-14 18:57:29 +11:00
49aa7cf999
Fix typo in variable name
2015-12-14 18:42:25 +11:00
d5819f664a
Add tests for generic RAG construction
2015-12-14 17:12:11 +11:00
e9c4c87519
Make RAG generic, requiring only label_image
2015-12-14 17:12:11 +11:00
c3d52d602c
Simplify reference to generate_binary_structure
2015-12-14 17:12:11 +11:00
97f3ad1a6b
NetworkX is required so remove optional import
2015-12-14 17:12:11 +11:00
975d1a4cc0
Merge pull request #1792 from scottsievert/fftconvolve
...
Uses fftconvolve instead of convolve2d for speedups
2015-12-14 16:37:18 +11:00
084ad3c22b
Merge pull request #1821 from jni/integral-image-fixes
...
Add deprecation path to skimage.transform.integrate API change
2015-12-13 20:36:16 -08:00
2892e90abc
removes paren
2015-12-13 16:59:59 -06:00
4d6c9e7b84
now N dimensional, changes constant, cleans and comments
2015-12-13 14:57:52 -06:00
5b8fd77b80
Merge pull request #1691 from juliusbierk/active-contour-model
...
New feature: Active contour model
2015-12-13 14:57:10 -06:00
0bc3ad8f79
Restore vectorised integrate deprecated behaviour
2015-12-13 16:25:29 +11:00
3899c571b7
Test individual coordinates for integrate in doctest
2015-12-13 14:55:44 +11:00
c7243e7383
Allow passing individual coordinate tuples to integrate
2015-12-13 14:55:23 +11:00
5df9e0cf70
Update incorrect version number in docstring
2015-12-13 14:54:57 +11:00
458dc15225
Add deprecation warning for old syntax for integrate()
2015-12-13 14:45:45 +11:00
38b1880ef7
Update docstring comments for integrate function
2015-12-13 14:35:59 +11:00
3fd47091dd
adds comment explaining time_ratio decision
2015-12-12 21:15:01 -06:00
Juan Nunez-Iglesias